RNA–Protein interactions for RNA: ENST00000567275.2

NIFKP4-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 4, humanhuman

BASIC

Gene NIFKP4, Length 1,192 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP4-201ENST00000567275 KCNK17Q96T54 332 aa19.73■□□□□ 0.75
NIFKP4-201ENST00000567275 AXIN2Q9Y2T1 843 aa19.73■□□□□ 0.75
NIFKP4-201ENST00000567275 PRIM1P49642 420 aaKnown RBP19.7■□□□□ 0.74
NIFKP4-201ENST00000567275 C6orf132Q5T0Z8 1188 aa19.7■□□□□ 0.74
NIFKP4-201ENST00000567275 POTEEQ6S8J3 1075 aa19.7■□□□□ 0.74
NIFKP4-201ENST00000567275 PSEN2P49810 448 aa19.68■□□□□ 0.74
NIFKP4-201ENST00000567275 TSR1Q2NL82 804 aaKnown RBP19.67■□□□□ 0.74
NIFKP4-201ENST00000567275 PCDH10Q9P2E7 1040 aa19.66■□□□□ 0.74
NIFKP4-201ENST00000567275 RBM26Q5T8P6 1007 aaKnown RBP19.64■□□□□ 0.73
NIFKP4-201ENST00000567275 NUTM2FA1L443 756 aa19.62■□□□□ 0.73
NIFKP4-201ENST00000567275 KRTAP3-3Q9BYR6 98 aa19.61■□□□□ 0.73
NIFKP4-201ENST00000567275 KRTAP3-2Q9BYR7 98 aa19.61■□□□□ 0.73
NIFKP4-201ENST00000567275 PPP1R3GB7ZBB8 358 aa19.6■□□□□ 0.73
NIFKP4-201ENST00000567275 LSM11P83369 360 aaKnown RBP eCLIP19.59■□□□□ 0.73
NIFKP4-201ENST00000567275 DMRTA1Q5VZB9 504 aa19.59■□□□□ 0.73
NIFKP4-201ENST00000567275 CDHR5Q9HBB8 845 aa19.59■□□□□ 0.73
NIFKP4-201ENST00000567275 COL9A1P20849 921 aa19.57■□□□□ 0.72
NIFKP4-201ENST00000567275 ANKRD13DQ6ZTN6 518 aa19.56■□□□□ 0.72
NIFKP4-201ENST00000567275 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.55■□□□□ 0.72
NIFKP4-201ENST00000567275 CERKQ8TCT0 537 aa19.55■□□□□ 0.72
NIFKP4-201ENST00000567275 LMOD2Q6P5Q4 547 aa19.52■□□□□ 0.72
NIFKP4-201ENST00000567275 GPIHBP1Q8IV16 184 aa19.51■□□□□ 0.71
NIFKP4-201ENST00000567275 ZBED2Q9BTP6 218 aa19.5■□□□□ 0.71
NIFKP4-201ENST00000567275 FCHSD2O94868 740 aa19.47■□□□□ 0.71
NIFKP4-201ENST00000567275 PTGDRQ13258 359 aa19.47■□□□□ 0.71
NIFKP4-201ENST00000567275 SLC4A5Q9BY07 1137 aa19.47■□□□□ 0.71
NIFKP4-201ENST00000567275 TK2O00142 265 aa19.46■□□□□ 0.71
NIFKP4-201ENST00000567275 ADGRD1Q6QNK2 874 aa19.46■□□□□ 0.71
NIFKP4-201ENST00000567275 NPDC1Q9NQX5 325 aaPredicted RBP19.46■□□□□ 0.71
NIFKP4-201ENST00000567275 PROX2Q3B8N5 592 aa19.44■□□□□ 0.7
NIFKP4-201ENST00000567275 PRSS12P56730 875 aa19.43■□□□□ 0.7
NIFKP4-201ENST00000567275 VPS9D1Q9Y2B5 631 aa19.43■□□□□ 0.7
NIFKP4-201ENST00000567275 CDCA7LQ96GN5 454 aa19.42■□□□□ 0.7
NIFKP4-201ENST00000567275 TRIM6-TRIM34B2RNG4 842 aa19.39■□□□□ 0.69
NIFKP4-201ENST00000567275 HIC1Q14526 733 aa19.38■□□□□ 0.69
NIFKP4-201ENST00000567275 RBM27Q9P2N5 1060 aaKnown RBP19.37■□□□□ 0.69
NIFKP4-201ENST00000567275 ONECUT3O60422 494 aaPredicted RBP19.36■□□□□ 0.69
NIFKP4-201ENST00000567275 PADI6Q6TGC4 694 aa19.36■□□□□ 0.69
NIFKP4-201ENST00000567275 STAC3Q96MF2 364 aa19.36■□□□□ 0.69
NIFKP4-201ENST00000567275 PACS2Q86VP3 889 aa19.35■□□□□ 0.69
NIFKP4-201ENST00000567275 RABGEF1Q9UJ41 708 aa19.35■□□□□ 0.69
NIFKP4-201ENST00000567275 GPR37O15354 613 aa19.34■□□□□ 0.69
NIFKP4-201ENST00000567275 KIAA1468Q9P260 1216 aa19.34■□□□□ 0.69
NIFKP4-201ENST00000567275 TSKSQ9UJT2 592 aa19.34■□□□□ 0.69
NIFKP4-201ENST00000567275 GNPATO15228 680 aa19.33■□□□□ 0.68
NIFKP4-201ENST00000567275 NBPF3Q9H094 633 aa19.31■□□□□ 0.68
NIFKP4-201ENST00000567275 HRO43593 1189 aa19.3■□□□□ 0.68
NIFKP4-201ENST00000567275 FAM198AQ9UFP1 575 aa19.28■□□□□ 0.68
NIFKP4-201ENST00000567275 NBPF26B4DH59 902 aa19.26■□□□□ 0.67
NIFKP4-201ENST00000567275 TTC13Q8NBP0 860 aa19.26■□□□□ 0.67
NIFKP4-201ENST00000567275 ZC3H15Q8WU90 426 aaKnown RBP19.26■□□□□ 0.67
NIFKP4-201ENST00000567275 BHMG1C9JSJ3 638 aaPredicted RBP19.25■□□□□ 0.67
NIFKP4-201ENST00000567275 SPNS2Q8IVW8 549 aa19.25■□□□□ 0.67
NIFKP4-201ENST00000567275 MRPL50Q8N5N7 158 aaKnown RBP19.25■□□□□ 0.67
NIFKP4-201ENST00000567275 PNMA3Q9UL41 463 aa19.24■□□□□ 0.67
NIFKP4-201ENST00000567275 FECHP22830 423 aa19.23■□□□□ 0.67
NIFKP4-201ENST00000567275 TATDN2Q93075 761 aa19.22■□□□□ 0.67
NIFKP4-201ENST00000567275 SEPT9Q9UHD8 586 aaPredicted RBP19.21■□□□□ 0.67
NIFKP4-201ENST00000567275 NUDT18Q6ZVK8 323 aa19.2■□□□□ 0.66
NIFKP4-201ENST00000567275 GOLGA8CPA6NN73 597 aa19.18■□□□□ 0.66
NIFKP4-201ENST00000567275 SMAPO00193 183 aa19.18■□□□□ 0.66
NIFKP4-201ENST00000567275 LAPTM4BQ86VI4 370 aa19.17■□□□□ 0.66
NIFKP4-201ENST00000567275 MYT1LQ9UL68 1186 aa19.17■□□□□ 0.66
NIFKP4-201ENST00000567275 C3orf80F5H4A9 247 aa19.15■□□□□ 0.66
NIFKP4-201ENST00000567275 ZMYND10O75800 440 aa19.15■□□□□ 0.66
NIFKP4-201ENST00000567275 ADGRG1Q9Y653 693 aa19.15■□□□□ 0.66
NIFKP4-201ENST00000567275 MAP2K5Q13163 448 aa19.14■□□□□ 0.65
NIFKP4-201ENST00000567275 FAM98CQ17RN3 349 aaKnown RBP19.14■□□□□ 0.65
NIFKP4-201ENST00000567275 FAM161AQ3B820 660 aa19.14■□□□□ 0.65
NIFKP4-201ENST00000567275 KRI1Q8N9T8 703 aaKnown RBP19.14■□□□□ 0.65
NIFKP4-201ENST00000567275 RBM46Q8TBY0 533 aaKnown RBP19.14■□□□□ 0.65
NIFKP4-201ENST00000567275 OATP04181 439 aa19.11■□□□□ 0.65
NIFKP4-201ENST00000567275 BARGINQ6ZT62 677 aa19.11■□□□□ 0.65
NIFKP4-201ENST00000567275 MINK1Q8N4C8 1332 aaPredicted RBP19.09■□□□□ 0.65
NIFKP4-201ENST00000567275 ZFRQ96KR1 1074 aaKnown RBP19.08■□□□□ 0.64
NIFKP4-201ENST00000567275 EYA1Q99502 592 aa19.08■□□□□ 0.64
NIFKP4-201ENST00000567275 IRF6O14896 467 aa19.06■□□□□ 0.64
NIFKP4-201ENST00000567275 WNT2BQ93097 391 aa19.05■□□□□ 0.64
NIFKP4-201ENST00000567275 RNF166Q96A37 237 aaPredicted RBP19.05■□□□□ 0.64
NIFKP4-201ENST00000567275 MMRN1Q13201 1228 aa19.04■□□□□ 0.64
NIFKP4-201ENST00000567275 ANKK1Q8NFD2 765 aa19.04■□□□□ 0.64
NIFKP4-201ENST00000567275 PXYLP1Q8TE99 480 aa19.04■□□□□ 0.64
NIFKP4-201ENST00000567275 KCTD12Q96CX2 325 aaKnown RBP19.04■□□□□ 0.64
NIFKP4-201ENST00000567275 HDGFP51858 240 aaKnown RBP19.03■□□□□ 0.64
NIFKP4-201ENST00000567275 METTL3Q86U44 580 aaKnown RBP19.03■□□□□ 0.64
NIFKP4-201ENST00000567275 CCDC102AQ96A19 550 aa19.02■□□□□ 0.64
NIFKP4-201ENST00000567275 DNAJB2P25686 324 aa19■□□□□ 0.63
NIFKP4-201ENST00000567275 RCCD1A6NED2 376 aa18.99■□□□□ 0.63
NIFKP4-201ENST00000567275 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.97■□□□□ 0.63
NIFKP4-201ENST00000567275 LRCH3Q96II8 777 aa18.97■□□□□ 0.63
NIFKP4-201ENST00000567275 PLSCR2Q9NRY7 297 aa18.97■□□□□ 0.63
NIFKP4-201ENST00000567275 TPRNQ4KMQ1 711 aa18.96■□□□□ 0.63
NIFKP4-201ENST00000567275 SAMD7Q7Z3H4 446 aa18.96■□□□□ 0.63
NIFKP4-201ENST00000567275 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.95■□□□□ 0.62
NIFKP4-201ENST00000567275 SWT1Q5T5J6 900 aaKnown RBP18.93■□□□□ 0.62
NIFKP4-201ENST00000567275 SLC24A3Q9HC58 644 aa18.93■□□□□ 0.62
NIFKP4-201ENST00000567275 THSD4Q6ZMP0 1018 aa18.92■□□□□ 0.62
NIFKP4-201ENST00000567275 TMEM134Q9H6X4 195 aa18.92■□□□□ 0.62
NIFKP4-201ENST00000567275 SOWAHBA6NEL2 793 aa18.91■□□□□ 0.62
NIFKP4-201ENST00000567275 SLC4A3P48751 1232 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms