RNA–Protein interactions for RNA: ENST00000565602.5

EDC3-208, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 5

Gene EDC3, Length 1,862 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-208ENST00000565602 DEPDC5O75140 1603 aa27.17■■□□□ 1.94
EDC3-208ENST00000565602 UNC13BO14795 1591 aa27.17■■□□□ 1.94
EDC3-208ENST00000565602 RNF17Q9BXT8 1623 aaKnown RBP27.14■■□□□ 1.93
EDC3-208ENST00000565602 MROH1Q8NDA8 1641 aa27.13■■□□□ 1.93
EDC3-208ENST00000565602 AGLP35573 1532 aa27.11■■□□□ 1.93
EDC3-208ENST00000565602 KDM5DQ9BY66 1539 aa27.08■■□□□ 1.93
EDC3-208ENST00000565602 PRDM15P57071 1507 aaPredicted RBP27.07■■□□□ 1.92
EDC3-208ENST00000565602 KIF3BO15066 747 aa27.06■■□□□ 1.92
EDC3-208ENST00000565602 IQGAP3Q86VI3 1631 aa27.05■■□□□ 1.92
EDC3-208ENST00000565602 VWDEQ8N2E2 1590 aa27.04■■□□□ 1.92
EDC3-208ENST00000565602 PZPP20742 1482 aa27.03■■□□□ 1.92
EDC3-208ENST00000565602 ACIN1Q9UKV3 1341 aaKnown RBP27■■□□□ 1.91
EDC3-208ENST00000565602 TRIM52Q96A61 297 aa27■■□□□ 1.91
EDC3-208ENST00000565602 NUP155O75694 1391 aa26.99■■□□□ 1.91
EDC3-208ENST00000565602 FAM135AQ9P2D6 1515 aa26.99■■□□□ 1.91
EDC3-208ENST00000565602 CEP152O94986 1710 aa26.98■■□□□ 1.91
EDC3-208ENST00000565602 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.96■■□□□ 1.913e-7■■□□□ 13.1
EDC3-208ENST00000565602 ZC3H13Q5T200 1668 aaKnown RBP26.93■■□□□ 1.9
EDC3-208ENST00000565602 GGT6Q6P531 493 aa26.93■■□□□ 1.9
EDC3-208ENST00000565602 TET3O43151 1660 aa26.92■■□□□ 1.9
EDC3-208ENST00000565602 MPHOSPH9Q99550 1183 aa26.91■■□□□ 1.9
EDC3-208ENST00000565602 ABCC3O15438 1527 aa26.91■■□□□ 1.9
EDC3-208ENST00000565602 LMTK2Q8IWU2 1503 aa26.91■■□□□ 1.9
EDC3-208ENST00000565602 KANK1Q14678 1352 aa26.89■■□□□ 1.89
EDC3-208ENST00000565602 E9PCH4 1651 aa26.88■■□□□ 1.89
EDC3-208ENST00000565602 CAMSAP1Q5T5Y3 1602 aa26.87■■□□□ 1.89
EDC3-208ENST00000565602 SLC4A1APQ9BWU0 796 aaKnown RBP26.87■■□□□ 1.89
EDC3-208ENST00000565602 ARID4BQ4LE39 1312 aaPredicted RBP26.87■■□□□ 1.89
EDC3-208ENST00000565602 CLTCQ00610 1675 aaKnown RBP26.86■■□□□ 1.89
EDC3-208ENST00000565602 EFCAB6Q5THR3 1501 aa26.86■■□□□ 1.89
EDC3-208ENST00000565602 MLECQ14165 292 aa26.84■■□□□ 1.89
EDC3-208ENST00000565602 FER1L4A9Z1Z3 1794 aa26.81■■□□□ 1.88
EDC3-208ENST00000565602 PKD2Q13563 968 aa26.81■■□□□ 1.88
EDC3-208ENST00000565602 PPP6R1Q9UPN7 881 aa26.81■■□□□ 1.88
EDC3-208ENST00000565602 WASHC2CQ9Y4E1 1318 aa26.8■■□□□ 1.88
EDC3-208ENST00000565602 FOXD1Q16676 465 aa26.79■■□□□ 1.88
EDC3-208ENST00000565602 ADAMTSL3P82987 1691 aa26.78■■□□□ 1.88
EDC3-208ENST00000565602 MROH2AA6NES4 1674 aa26.77■■□□□ 1.88
EDC3-208ENST00000565602 NPATQ14207 1427 aa26.75■■□□□ 1.87
EDC3-208ENST00000565602 ZNF316A6NFI3 1004 aaPredicted RBP26.75■■□□□ 1.87
EDC3-208ENST00000565602 SPHKAPQ2M3C7 1700 aa26.75■■□□□ 1.87
EDC3-208ENST00000565602 CFAP65Q6ZU64 1925 aaKnown RBP26.75■■□□□ 1.87
EDC3-208ENST00000565602 MADDQ8WXG6 1647 aa26.75■■□□□ 1.87
EDC3-208ENST00000565602 ARHGAP31Q2M1Z3 1444 aa26.74■■□□□ 1.87
EDC3-208ENST00000565602 RPRD2Q5VT52 1461 aaKnown RBP26.73■■□□□ 1.87
EDC3-208ENST00000565602 ANKRD30BQ9BXX2 1392 aa26.73■■□□□ 1.87
EDC3-208ENST00000565602 PLA2R1Q13018 1463 aa26.72■■□□□ 1.87
EDC3-208ENST00000565602 CNTLNQ9NXG0 1405 aa26.7■■□□□ 1.87
EDC3-208ENST00000565602 PREX1Q8TCU6 1659 aa26.7■■□□□ 1.86
EDC3-208ENST00000565602 RIMS1Q86UR5 1692 aaKnown RBP26.69■■□□□ 1.86
EDC3-208ENST00000565602 C3P01024 1663 aa26.68■■□□□ 1.86
EDC3-208ENST00000565602 PTPRTO14522 1441 aa26.68■■□□□ 1.86
EDC3-208ENST00000565602 SIN3AQ96ST3 1273 aa26.68■■□□□ 1.86
EDC3-208ENST00000565602 TRPM2O94759 1503 aa26.67■■□□□ 1.86
EDC3-208ENST00000565602 TIMELESSQ9UNS1 1208 aa26.66■■□□□ 1.86
EDC3-208ENST00000565602 ZMYM3Q14202 1370 aa26.65■■□□□ 1.86
EDC3-208ENST00000565602 SYNMO15061 1565 aa26.64■■□□□ 1.85
EDC3-208ENST00000565602 NOS1P29475 1434 aa26.64■■□□□ 1.85
EDC3-208ENST00000565602 NEUROD1Q13562 356 aa26.63■■□□□ 1.85
EDC3-208ENST00000565602 ESF1Q9H501 851 aaKnown RBP26.63■■□□□ 1.85
EDC3-208ENST00000565602 SPATA31D1Q6ZQQ2 1576 aa26.62■■□□□ 1.85
EDC3-208ENST00000565602 ERVK-7P63135 1459 aa26.62■■□□□ 1.85
EDC3-208ENST00000565602 CLTCL1P53675 1640 aa26.61■■□□□ 1.85
EDC3-208ENST00000565602 UGGT1Q9NYU2 1555 aa26.59■■□□□ 1.85
EDC3-208ENST00000565602 PIK3C2BO00750 1634 aa26.59■■□□□ 1.85
EDC3-208ENST00000565602 FBXO31Q5XUX0 539 aaPredicted RBP26.57■■□□□ 1.84
EDC3-208ENST00000565602 DIEXFQ68CQ4 756 aaKnown RBP26.57■■□□□ 1.84
EDC3-208ENST00000565602 TONSLQ96HA7 1378 aa26.54■■□□□ 1.84
EDC3-208ENST00000565602 CCDC144AA2RUR9 1427 aa26.54■■□□□ 1.84
EDC3-208ENST00000565602 CEBPAP49715 358 aaPredicted RBP26.52■■□□□ 1.84
EDC3-208ENST00000565602 KIF1BO60333 1816 aa26.5■■□□□ 1.83
EDC3-208ENST00000565602 PTPRMP28827 1452 aa26.49■■□□□ 1.83
EDC3-208ENST00000565602 KDM4FA0A1W2PPD8 638 aa26.46■■□□□ 1.83
EDC3-208ENST00000565602 MYO5BQ9ULV0 1848 aa26.45■■□□□ 1.83
EDC3-208ENST00000565602 NEURL4Q96JN8 1562 aa26.44■■□□□ 1.82
EDC3-208ENST00000565602 SPATA31E1Q6ZUB1 1445 aa26.44■■□□□ 1.82
EDC3-208ENST00000565602 TNRQ92752 1358 aa26.44■■□□□ 1.82
EDC3-208ENST00000565602 PPP1R15AO75807 674 aaPredicted RBP26.44■■□□□ 1.82
EDC3-208ENST00000565602 ADGRB3O60242 1522 aa26.43■■□□□ 1.82
EDC3-208ENST00000565602 TMEM131LA2VDJ0 1609 aa26.42■■□□□ 1.82
EDC3-208ENST00000565602 MYO3AQ8NEV4 1616 aa26.42■■□□□ 1.82
EDC3-208ENST00000565602 IDI1Q13907 227 aa26.41■■□□□ 1.82
EDC3-208ENST00000565602 SLC52A1Q9NWF4 448 aa26.41■■□□□ 1.82
EDC3-208ENST00000565602 PLPPR3Q6T4P5 718 aa26.4■■□□□ 1.82
EDC3-208ENST00000565602 KDM5AP29375 1690 aaKnown RBP26.38■■□□□ 1.81
EDC3-208ENST00000565602 SETD1BQ9UPS6 1966 aaKnown RBP26.37■■□□□ 1.81
EDC3-208ENST00000565602 UBR1Q8IWV7 1749 aa26.37■■□□□ 1.81
EDC3-208ENST00000565602 IFT172Q9UG01 1749 aa26.37■■□□□ 1.81
EDC3-208ENST00000565602 NLRP1Q9C000 1473 aa26.36■■□□□ 1.81
EDC3-208ENST00000565602 ZNF142P52746 1687 aaPredicted RBP26.33■■□□□ 1.81
EDC3-208ENST00000565602 L3MBTL2Q969R5 705 aa26.33■■□□□ 1.81
EDC3-208ENST00000565602 PPLO60437 1756 aa26.32■■□□□ 1.8
EDC3-208ENST00000565602 A2ML1A8K2U0 1454 aa26.31■■□□□ 1.8
EDC3-208ENST00000565602 CEP170BQ9Y4F5 1589 aaPredicted RBP26.3■■□□□ 1.8
EDC3-208ENST00000565602 RGL3Q3MIN7 710 aa26.3■■□□□ 1.8
EDC3-208ENST00000565602 NEXMIFQ5QGS0 1516 aa26.28■■□□□ 1.8
EDC3-208ENST00000565602 CHGAP10645 457 aaKnown RBP26.28■■□□□ 1.8
EDC3-208ENST00000565602 DCAF11Q8TEB1 546 aa26.21■■□□□ 1.79
EDC3-208ENST00000565602 MYOM2P54296 1465 aa26.2■■□□□ 1.79
EDC3-208ENST00000565602 ZNF326Q5BKZ1 582 aaKnown RBP26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms