RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 WASHC2CQ9Y4E1 1318 aa26.9■■□□□ 1.9
MAP1LC3B-206ENST00000564844 KDM5CP41229 1560 aa26.89■■□□□ 1.9
MAP1LC3B-206ENST00000564844 ARID4BQ4LE39 1312 aaPredicted RBP26.89■■□□□ 1.89
MAP1LC3B-206ENST00000564844 HNRNPMP52272 730 aaKnown RBP eCLIP26.88■■□□□ 1.89
MAP1LC3B-206ENST00000564844 POLR1AO95602 1720 aaPredicted RBP26.88■■□□□ 1.89
MAP1LC3B-206ENST00000564844 ADAMTS8Q9UP79 889 aa26.88■■□□□ 1.89
MAP1LC3B-206ENST00000564844 MBD5Q9P267 1494 aa26.86■■□□□ 1.89
MAP1LC3B-206ENST00000564844 PDE3BQ13370 1112 aa26.86■■□□□ 1.89
MAP1LC3B-206ENST00000564844 ANKRD50Q9ULJ7 1429 aa26.85■■□□□ 1.89
MAP1LC3B-206ENST00000564844 WDR62O43379 1518 aa26.84■■□□□ 1.89
MAP1LC3B-206ENST00000564844 DNMT1P26358 1616 aaKnown RBP26.84■■□□□ 1.89
MAP1LC3B-206ENST00000564844 IQGAP2Q13576 1575 aa26.83■■□□□ 1.89
MAP1LC3B-206ENST00000564844 CHMP7Q8WUX9 453 aaPredicted RBP26.83■■□□□ 1.89
MAP1LC3B-206ENST00000564844 PER1O15534 1290 aaPredicted RBP26.82■■□□□ 1.88
MAP1LC3B-206ENST00000564844 CAMSAP2Q08AD1 1489 aa26.82■■□□□ 1.88
MAP1LC3B-206ENST00000564844 ANKRD30AQ9BXX3 1397 aa26.81■■□□□ 1.88
MAP1LC3B-206ENST00000564844 CCDC146Q8IYE0 955 aa26.8■■□□□ 1.88
MAP1LC3B-206ENST00000564844 TSPY4P0CV99 314 aa26.8■■□□□ 1.88
MAP1LC3B-206ENST00000564844 TSPY10P0CW01 314 aa26.8■■□□□ 1.88
MAP1LC3B-206ENST00000564844 ZNF608Q9ULD9 1512 aaPredicted RBP26.78■■□□□ 1.88
MAP1LC3B-206ENST00000564844 NUP153P49790 1475 aaKnown RBP26.78■■□□□ 1.88
MAP1LC3B-206ENST00000564844 C8orf34Q49A92 452 aa26.76■■□□□ 1.87
MAP1LC3B-206ENST00000564844 RALGAPBQ86X10 1494 aa26.76■■□□□ 1.87
MAP1LC3B-206ENST00000564844 KIF14Q15058 1648 aa26.75■■□□□ 1.87
MAP1LC3B-206ENST00000564844 PARD3Q8TEW0 1356 aa26.75■■□□□ 1.87
MAP1LC3B-206ENST00000564844 FAM161AQ3B820 660 aa26.74■■□□□ 1.87
MAP1LC3B-206ENST00000564844 KIAA0586Q9BVV6 1533 aa26.74■■□□□ 1.87
MAP1LC3B-206ENST00000564844 ERCC6Q03468 1493 aa26.74■■□□□ 1.87
MAP1LC3B-206ENST00000564844 DISP3Q9P2K9 1392 aa26.73■■□□□ 1.87
MAP1LC3B-206ENST00000564844 WDR43Q15061 677 aaKnown RBP eCLIP26.73■■□□□ 1.87
MAP1LC3B-206ENST00000564844 SLKQ9H2G2 1235 aaPredicted RBP26.73■■□□□ 1.87
MAP1LC3B-206ENST00000564844 PLB1Q6P1J6 1458 aa26.71■■□□□ 1.87
MAP1LC3B-206ENST00000564844 PLEKHD1A6NEE1 506 aa26.7■■□□□ 1.86
MAP1LC3B-206ENST00000564844 GPATCH8Q9UKJ3 1502 aaKnown RBP26.69■■□□□ 1.86
MAP1LC3B-206ENST00000564844 BCAR3O75815 825 aa26.69■■□□□ 1.86
MAP1LC3B-206ENST00000564844 CENPQQ7L2Z9 268 aaPredicted RBP26.69■■□□□ 1.86
MAP1LC3B-206ENST00000564844 KDM2BQ8NHM5 1336 aa26.68■■□□□ 1.86
MAP1LC3B-206ENST00000564844 SLC24A1O60721 1099 aa26.67■■□□□ 1.86
MAP1LC3B-206ENST00000564844 PLEKHH1Q9ULM0 1364 aa26.67■■□□□ 1.86
MAP1LC3B-206ENST00000564844 DUSP27Q5VZP5 1158 aa26.67■■□□□ 1.86
MAP1LC3B-206ENST00000564844 UHRF1BP1Q6BDS2 1440 aa26.66■■□□□ 1.86
MAP1LC3B-206ENST00000564844 SPRYD3Q8NCJ5 442 aa26.66■■□□□ 1.86
MAP1LC3B-206ENST00000564844 SPINK5Q9NQ38 1064 aaPredicted RBP26.65■■□□□ 1.86
MAP1LC3B-206ENST00000564844 POGKQ9P215 609 aa26.65■■□□□ 1.86
MAP1LC3B-206ENST00000564844 TROQ12816 1431 aaPredicted RBP26.64■■□□□ 1.86
MAP1LC3B-206ENST00000564844 SEC24BO95487 1268 aa26.63■■□□□ 1.85
MAP1LC3B-206ENST00000564844 MRC2Q9UBG0 1479 aa26.63■■□□□ 1.85
MAP1LC3B-206ENST00000564844 TESK2Q96S53 571 aa26.63■■□□□ 1.85
MAP1LC3B-206ENST00000564844 GOLGA2Q08379 1002 aa26.62■■□□□ 1.85
MAP1LC3B-206ENST00000564844 KNSTRNQ9Y448 316 aa26.61■■□□□ 1.85
MAP1LC3B-206ENST00000564844 DISP1Q96F81 1524 aa26.6■■□□□ 1.85
MAP1LC3B-206ENST00000564844 TARBP1Q13395 1621 aaKnown RBP26.6■■□□□ 1.85
MAP1LC3B-206ENST00000564844 C9orf84Q5VXU9 1444 aa26.59■■□□□ 1.85
MAP1LC3B-206ENST00000564844 IGHDP01880 384 aa26.59■■□□□ 1.85
MAP1LC3B-206ENST00000564844 TMF1P82094 1093 aa26.59■■□□□ 1.85
MAP1LC3B-206ENST00000564844 APAF1O14727 1248 aa26.59■■□□□ 1.85
MAP1LC3B-206ENST00000564844 NEUROD2Q15784 382 aa26.58■■□□□ 1.85
MAP1LC3B-206ENST00000564844 SENP3Q9H4L4 574 aaPredicted RBP26.58■■□□□ 1.85
MAP1LC3B-206ENST00000564844 PPP2R1AP30153 589 aa26.58■■□□□ 1.85
MAP1LC3B-206ENST00000564844 JPH4Q96JJ6 628 aa26.56■■□□□ 1.84
MAP1LC3B-206ENST00000564844 CANXP27824 592 aaKnown RBP26.55■■□□□ 1.84
MAP1LC3B-206ENST00000564844 CCDC144AA2RUR9 1427 aa26.55■■□□□ 1.84
MAP1LC3B-206ENST00000564844 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.54■■□□□ 1.84
MAP1LC3B-206ENST00000564844 DMRT2Q9Y5R5 561 aa26.54■■□□□ 1.84
MAP1LC3B-206ENST00000564844 PANK1Q8TE04 598 aa26.53■■□□□ 1.84
MAP1LC3B-206ENST00000564844 COG6Q9Y2V7 657 aa26.53■■□□□ 1.84
MAP1LC3B-206ENST00000564844 GZF1Q9H116 711 aaPredicted RBP26.52■■□□□ 1.84
MAP1LC3B-206ENST00000564844 RAPGEF6Q8TEU7 1601 aa26.51■■□□□ 1.84
MAP1LC3B-206ENST00000564844 PRAG1Q86YV5 1406 aa26.5■■□□□ 1.83
MAP1LC3B-206ENST00000564844 BLMP54132 1417 aaPredicted RBP26.5■■□□□ 1.83
MAP1LC3B-206ENST00000564844 ADAMTS12P58397 1594 aa26.48■■□□□ 1.83
MAP1LC3B-206ENST00000564844 KIAA0556O60303 1618 aa26.48■■□□□ 1.83
MAP1LC3B-206ENST00000564844 PBRM1Q86U86 1689 aa26.48■■□□□ 1.83
MAP1LC3B-206ENST00000564844 ERBINQ96RT1 1412 aa26.47■■□□□ 1.83
MAP1LC3B-206ENST00000564844 SLFN5Q08AF3 891 aa26.47■■□□□ 1.83
MAP1LC3B-206ENST00000564844 BCL2L13Q9BXK5 485 aa26.47■■□□□ 1.83
MAP1LC3B-206ENST00000564844 TNNT2P45379 298 aaPredicted RBP26.47■■□□□ 1.83
MAP1LC3B-206ENST00000564844 ADGRL2O95490 1459 aa26.45■■□□□ 1.82
MAP1LC3B-206ENST00000564844 RRP7AQ9Y3A4 280 aaKnown RBP26.45■■□□□ 1.82
MAP1LC3B-206ENST00000564844 ARHGEF12Q9NZN5 1544 aa26.43■■□□□ 1.82
MAP1LC3B-206ENST00000564844 CLUAP1Q96AJ1 413 aa26.42■■□□□ 1.82
MAP1LC3B-206ENST00000564844 TNNQ9UQP3 1299 aa26.42■■□□□ 1.82
MAP1LC3B-206ENST00000564844 ZMYM4Q5VZL5 1548 aa26.42■■□□□ 1.82
MAP1LC3B-206ENST00000564844 USP19O94966 1318 aa26.42■■□□□ 1.82
MAP1LC3B-206ENST00000564844 ADGBQ8N7X0 1667 aa26.41■■□□□ 1.82
MAP1LC3B-206ENST00000564844 E9PCH4 1651 aa26.4■■□□□ 1.82
MAP1LC3B-206ENST00000564844 RRAGDQ9NQL2 400 aaPredicted RBP26.4■■□□□ 1.82
MAP1LC3B-206ENST00000564844 AMER1Q5JTC6 1135 aaPredicted RBP26.38■■□□□ 1.81
MAP1LC3B-206ENST00000564844 COL17A1Q9UMD9 1497 aaPredicted RBP26.38■■□□□ 1.81
MAP1LC3B-206ENST00000564844 UBE2Q2Q8WVN8 375 aa26.37■■□□□ 1.81
MAP1LC3B-206ENST00000564844 A2MP01023 1474 aa26.36■■□□□ 1.81
MAP1LC3B-206ENST00000564844 MAGI2Q86UL8 1455 aa26.35■■□□□ 1.81
MAP1LC3B-206ENST00000564844 ZNF521Q96K83 1311 aa26.35■■□□□ 1.81
MAP1LC3B-206ENST00000564844 IFT140Q96RY7 1462 aa26.35■■□□□ 1.81
MAP1LC3B-206ENST00000564844 KDM5DQ9BY66 1539 aa26.35■■□□□ 1.81
MAP1LC3B-206ENST00000564844 FAM43AQ8N2R8 423 aa26.35■■□□□ 1.81
MAP1LC3B-206ENST00000564844 CEP170Q5SW79 1584 aa26.33■■□□□ 1.81
MAP1LC3B-206ENST00000564844 BECN1Q14457 450 aa26.33■■□□□ 1.8
MAP1LC3B-206ENST00000564844 FAM135AQ9P2D6 1515 aa26.32■■□□□ 1.8
MAP1LC3B-206ENST00000564844 PANK2Q9BZ23 570 aa26.31■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms