RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-210ENST00000564582 KCNK17Q96T54 332 aa10.21□□□□□ -0.77
CHD9-210ENST00000564582 PLSCR2Q9NRY7 297 aa10.21□□□□□ -0.77
CHD9-210ENST00000564582 CERKQ8TCT0 537 aa10.2□□□□□ -0.78
CHD9-210ENST00000564582 NUTM2FA1L443 756 aa10.19□□□□□ -0.78
CHD9-210ENST00000564582 RBM26Q5T8P6 1007 aaKnown RBP10.19□□□□□ -0.78
CHD9-210ENST00000564582 LMOD2Q6P5Q4 547 aa10.18□□□□□ -0.78
CHD9-210ENST00000564582 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.18□□□□□ -0.78
CHD9-210ENST00000564582 CDAN1Q8IWY9 1227 aa10.18□□□□□ -0.78
CHD9-210ENST00000564582 PPP1R3GB7ZBB8 358 aa10.17□□□□□ -0.78
CHD9-210ENST00000564582 TSR1Q2NL82 804 aaKnown RBP10.17□□□□□ -0.78
CHD9-210ENST00000564582 GPIHBP1Q8IV16 184 aa10.17□□□□□ -0.78
CHD9-210ENST00000564582 PCDH10Q9P2E7 1040 aa10.17□□□□□ -0.78
CHD9-210ENST00000564582 PRIM1P49642 420 aaKnown RBP10.16□□□□□ -0.78
CHD9-210ENST00000564582 AXIN2Q9Y2T1 843 aa10.16□□□□□ -0.78
CHD9-210ENST00000564582 PSEN2P49810 448 aa10.15□□□□□ -0.78
CHD9-210ENST00000564582 FCHSD2O94868 740 aa10.14□□□□□ -0.79
CHD9-210ENST00000564582 POTEEQ6S8J3 1075 aa10.13□□□□□ -0.79
CHD9-210ENST00000564582 CDHR5Q9HBB8 845 aa10.13□□□□□ -0.79
CHD9-210ENST00000564582 LSM11P83369 360 aaKnown RBP eCLIP10.12□□□□□ -0.79
CHD9-210ENST00000564582 COL9A1P20849 921 aa10.11□□□□□ -0.79
CHD9-210ENST00000564582 PTGDRQ13258 359 aa10.11□□□□□ -0.79
CHD9-210ENST00000564582 TK2O00142 265 aa10.1□□□□□ -0.79
CHD9-210ENST00000564582 HIC1Q14526 733 aa10.1□□□□□ -0.79
CHD9-210ENST00000564582 SLC4A5Q9BY07 1137 aa10.1□□□□□ -0.79
CHD9-210ENST00000564582 RBM27Q9P2N5 1060 aaKnown RBP10.1□□□□□ -0.79
CHD9-210ENST00000564582 DMRTA1Q5VZB9 504 aa10.09□□□□□ -0.79
CHD9-210ENST00000564582 ANKRD13DQ6ZTN6 518 aa10.09□□□□□ -0.79
CHD9-210ENST00000564582 ZBED2Q9BTP6 218 aa10.09□□□□□ -0.79
CHD9-210ENST00000564582 PRSS12P56730 875 aa10.08□□□□□ -0.8
CHD9-210ENST00000564582 KRTAP3-3Q9BYR6 98 aa10.08□□□□□ -0.8
CHD9-210ENST00000564582 KRTAP3-2Q9BYR7 98 aa10.08□□□□□ -0.8
CHD9-210ENST00000564582 NPDC1Q9NQX5 325 aaPredicted RBP10.08□□□□□ -0.8
CHD9-210ENST00000564582 ONECUT3O60422 494 aaPredicted RBP10.07□□□□□ -0.8
CHD9-210ENST00000564582 CDCA7LQ96GN5 454 aa10.07□□□□□ -0.8
CHD9-210ENST00000564582 TRIM6-TRIM34B2RNG4 842 aa10.06□□□□□ -0.8
CHD9-210ENST00000564582 GNPATO15228 680 aa10.06□□□□□ -0.8
CHD9-210ENST00000564582 ADGRD1Q6QNK2 874 aa10.06□□□□□ -0.8
CHD9-210ENST00000564582 PACS2Q86VP3 889 aa10.05□□□□□ -0.8
CHD9-210ENST00000564582 STAC3Q96MF2 364 aa10.05□□□□□ -0.8
CHD9-210ENST00000564582 VPS9D1Q9Y2B5 631 aa10.05□□□□□ -0.8
CHD9-210ENST00000564582 NBPF3Q9H094 633 aa10.04□□□□□ -0.8
CHD9-210ENST00000564582 RABGEF1Q9UJ41 708 aa10.04□□□□□ -0.8
CHD9-210ENST00000564582 GPR37O15354 613 aa10.03□□□□□ -0.8
CHD9-210ENST00000564582 PROX2Q3B8N5 592 aa10.03□□□□□ -0.8
CHD9-210ENST00000564582 PADI6Q6TGC4 694 aa10.03□□□□□ -0.8
CHD9-210ENST00000564582 ZC3H15Q8WU90 426 aaKnown RBP10.03□□□□□ -0.8
CHD9-210ENST00000564582 NBPF26B4DH59 902 aa10.02□□□□□ -0.81
CHD9-210ENST00000564582 KIAA1468Q9P260 1216 aa10□□□□□ -0.81
CHD9-210ENST00000564582 TSKSQ9UJT2 592 aa10□□□□□ -0.81
CHD9-210ENST00000564582 MRPL50Q8N5N7 158 aaKnown RBP9.99□□□□□ -0.81
CHD9-210ENST00000564582 TTC13Q8NBP0 860 aa9.99□□□□□ -0.81
CHD9-210ENST00000564582 ZMYND10O75800 440 aa9.98□□□□□ -0.81
CHD9-210ENST00000564582 KRI1Q8N9T8 703 aaKnown RBP9.98□□□□□ -0.81
CHD9-210ENST00000564582 HRO43593 1189 aa9.97□□□□□ -0.81
CHD9-210ENST00000564582 MAP2K5Q13163 448 aa9.97□□□□□ -0.81
CHD9-210ENST00000564582 RBM46Q8TBY0 533 aaKnown RBP9.97□□□□□ -0.81
CHD9-210ENST00000564582 PNMA3Q9UL41 463 aa9.97□□□□□ -0.81
CHD9-210ENST00000564582 BHMG1C9JSJ3 638 aaPredicted RBP9.96□□□□□ -0.82
CHD9-210ENST00000564582 OATP04181 439 aa9.96□□□□□ -0.82
CHD9-210ENST00000564582 BARGINQ6ZT62 677 aa9.96□□□□□ -0.82
CHD9-210ENST00000564582 LAPTM4BQ86VI4 370 aa9.96□□□□□ -0.82
CHD9-210ENST00000564582 TATDN2Q93075 761 aa9.96□□□□□ -0.82
CHD9-210ENST00000564582 MINK1Q8N4C8 1332 aaPredicted RBP9.96□□□□□ -0.82
CHD9-210ENST00000564582 GOLGA8CPA6NN73 597 aa9.95□□□□□ -0.82
CHD9-210ENST00000564582 FECHP22830 423 aa9.95□□□□□ -0.82
CHD9-210ENST00000564582 NUDT18Q6ZVK8 323 aa9.95□□□□□ -0.82
CHD9-210ENST00000564582 FAM198AQ9UFP1 575 aa9.95□□□□□ -0.82
CHD9-210ENST00000564582 FAM98CQ17RN3 349 aaKnown RBP9.94□□□□□ -0.82
CHD9-210ENST00000564582 ADGRG1Q9Y653 693 aa9.94□□□□□ -0.82
CHD9-210ENST00000564582 IRF6O14896 467 aa9.92□□□□□ -0.82
CHD9-210ENST00000564582 SEPT9Q9UHD8 586 aaPredicted RBP9.92□□□□□ -0.82
CHD9-210ENST00000564582 HDGFP51858 240 aaKnown RBP9.91□□□□□ -0.82
CHD9-210ENST00000564582 TPRNQ4KMQ1 711 aa9.91□□□□□ -0.82
CHD9-210ENST00000564582 SMAPO00193 183 aa9.9□□□□□ -0.82
CHD9-210ENST00000564582 MYT1LQ9UL68 1186 aa9.9□□□□□ -0.82
CHD9-210ENST00000564582 METTL3Q86U44 580 aaKnown RBP9.89□□□□□ -0.83
CHD9-210ENST00000564582 SPNS2Q8IVW8 549 aa9.89□□□□□ -0.83
CHD9-210ENST00000564582 PXYLP1Q8TE99 480 aa9.89□□□□□ -0.83
CHD9-210ENST00000564582 EYA1Q99502 592 aa9.89□□□□□ -0.83
CHD9-210ENST00000564582 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.88□□□□□ -0.83
CHD9-210ENST00000564582 DNAJB2P25686 324 aa9.88□□□□□ -0.83
CHD9-210ENST00000564582 SLC4A3P48751 1232 aa9.88□□□□□ -0.83
CHD9-210ENST00000564582 FAM161AQ3B820 660 aa9.88□□□□□ -0.83
CHD9-210ENST00000564582 ANKK1Q8NFD2 765 aa9.88□□□□□ -0.83
CHD9-210ENST00000564582 CCDC102AQ96A19 550 aa9.88□□□□□ -0.83
CHD9-210ENST00000564582 ZFRQ96KR1 1074 aaKnown RBP9.88□□□□□ -0.83
CHD9-210ENST00000564582 AK7Q96M32 723 aa9.87□□□□□ -0.83
CHD9-210ENST00000564582 C3orf80F5H4A9 247 aa9.86□□□□□ -0.83
CHD9-210ENST00000564582 RCCD1A6NED2 376 aa9.85□□□□□ -0.83
CHD9-210ENST00000564582 WNT2BQ93097 391 aa9.85□□□□□ -0.83
CHD9-210ENST00000564582 SLC24A3Q9HC58 644 aa9.85□□□□□ -0.83
CHD9-210ENST00000564582 LRCH3Q96II8 777 aa9.84□□□□□ -0.83
CHD9-210ENST00000564582 NECTIN2Q92692 538 aa9.83□□□□□ -0.84
CHD9-210ENST00000564582 RNF166Q96A37 237 aaPredicted RBP9.83□□□□□ -0.84
CHD9-210ENST00000564582 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.83□□□□□ -0.84
CHD9-210ENST00000564582 KCTD12Q96CX2 325 aaKnown RBP9.82□□□□□ -0.84
CHD9-210ENST00000564582 TMEM134Q9H6X4 195 aa9.82□□□□□ -0.84
CHD9-210ENST00000564582 SAMD7Q7Z3H4 446 aa9.81□□□□□ -0.84
CHD9-210ENST00000564582 SLF2Q8IX21 1173 aa9.81□□□□□ -0.84
CHD9-210ENST00000564582 SOWAHBA6NEL2 793 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms