RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	FEZ1	Q99689	392 aa		5.28	□□□□□ -1.56
MACF1-231	ENST00000564288	THOC2	Q8NI27	1593 aa	Known RBP	5.28	□□□□□ -1.56
MACF1-231	ENST00000564288	FAM193A	P78312	1265 aa		5.28	□□□□□ -1.56
MACF1-231	ENST00000564288	DDX49	Q9Y6V7	483 aa	Known RBP	5.28	□□□□□ -1.56
MACF1-231	ENST00000564288	SLK	Q9H2G2	1235 aa	Predicted RBP	5.28	□□□□□ -1.56
MACF1-231	ENST00000564288	R3HCC1	Q9Y3T6	440 aa	Known RBP	5.28	□□□□□ -1.56
MACF1-231	ENST00000564288	PLPPR3	Q6T4P5	718 aa		5.27	□□□□□ -1.57
MACF1-231	ENST00000564288	TPM1	P09493	284 aa		5.27	□□□□□ -1.57
MACF1-231	ENST00000564288	SIN3A	Q96ST3	1273 aa		5.27	□□□□□ -1.57
MACF1-231	ENST00000564288	CENPJ	Q9HC77	1338 aa	Predicted RBP	5.27	□□□□□ -1.57
MACF1-231	ENST00000564288	ATP6V1D	Q9Y5K8	247 aa		5.27	□□□□□ -1.57
MACF1-231	ENST00000564288	GOLGA6L4	A6NEF3	574 aa		5.27	□□□□□ -1.57
MACF1-231	ENST00000564288	OFD1	O75665	1012 aa		5.27	□□□□□ -1.57
MACF1-231	ENST00000564288	KIAA1211	Q6ZU35	1233 aa		5.27	□□□□□ -1.57
MACF1-231	ENST00000564288	TIGD1	Q96MW7	591 aa		5.27	□□□□□ -1.57
MACF1-231	ENST00000564288	WWC1	Q8IX03	1113 aa		5.27	□□□□□ -1.57
MACF1-231	ENST00000564288	HDAC5	Q9UQL6	1122 aa		5.27	□□□□□ -1.57
MACF1-231	ENST00000564288	FRAT2	O75474	233 aa	Predicted RBP	5.27	□□□□□ -1.57
MACF1-231	ENST00000564288	NASP	P49321	788 aa	Predicted RBP	5.26	□□□□□ -1.57
MACF1-231	ENST00000564288	PRIMPOL	Q96LW4	560 aa		5.26	□□□□□ -1.57
MACF1-231	ENST00000564288	SMARCA4	P51532	1647 aa		5.26	□□□□□ -1.57
MACF1-231	ENST00000564288	TUBB4B	P68371	445 aa		5.26	□□□□□ -1.57
MACF1-231	ENST00000564288	BCCIP	Q9P287	314 aa	Known RBP eCLIP	5.26	□□□□□ -1.57
MACF1-231	ENST00000564288	RGS3	P49796	1198 aa		5.26	□□□□□ -1.57
MACF1-231	ENST00000564288	GOLGA2	Q08379	1002 aa		5.26	□□□□□ -1.57
MACF1-231	ENST00000564288	KIF16B	Q96L93	1317 aa		5.26	□□□□□ -1.57
MACF1-231	ENST00000564288	FAM107B	Q9H098	131 aa		5.26	□□□□□ -1.57
MACF1-231	ENST00000564288	ZMYM4	Q5VZL5	1548 aa		5.26	□□□□□ -1.57
MACF1-231	ENST00000564288	FTSJ3	Q8IY81	847 aa	Known RBP	5.26	□□□□□ -1.57
MACF1-231	ENST00000564288	TUBB4A	P04350	444 aa		5.26	□□□□□ -1.57
MACF1-231	ENST00000564288	RBM28	Q9NW13	759 aa	Known RBP	5.25	□□□□□ -1.57
MACF1-231	ENST00000564288	UTP14C	Q5TAP6	766 aa	Known RBP	5.25	□□□□□ -1.57
MACF1-231	ENST00000564288	PRKRIP1	Q9H875	184 aa	Predicted RBP	5.25	□□□□□ -1.57
MACF1-231	ENST00000564288	GRPEL1	Q9HAV7	217 aa		5.25	□□□□□ -1.57
MACF1-231	ENST00000564288	SLC4A3	P48751	1232 aa		5.25	□□□□□ -1.57
MACF1-231	ENST00000564288	DHX29	Q7Z478	1369 aa	Known RBP	5.25	□□□□□ -1.57
MACF1-231	ENST00000564288	XRCC6	P12956	609 aa	Known RBP eCLIP	5.25	□□□□□ -1.57	4e-7	■■■■■ 28
MACF1-231	ENST00000564288	BCL11B	Q9C0K0	894 aa	Predicted RBP	5.25	□□□□□ -1.57
MACF1-231	ENST00000564288	PAXBP1	Q9Y5B6	917 aa		5.25	□□□□□ -1.57
MACF1-231	ENST00000564288	HSP90B1	P14625	803 aa	Known RBP	5.25	□□□□□ -1.57
MACF1-231	ENST00000564288	MNS1	Q8NEH6	495 aa		5.24	□□□□□ -1.57
MACF1-231	ENST00000564288	AK7	Q96M32	723 aa		5.24	□□□□□ -1.57
MACF1-231	ENST00000564288	RAPGEF2	Q9Y4G8	1499 aa		5.24	□□□□□ -1.57
MACF1-231	ENST00000564288	PLEKHG5	O94827	1062 aa		5.24	□□□□□ -1.57
MACF1-231	ENST00000564288	RBM25	P49756	843 aa	Known RBP	5.24	□□□□□ -1.57
MACF1-231	ENST00000564288	CT47B1	P0C2W7	299 aa	Predicted RBP	5.24	□□□□□ -1.57
MACF1-231	ENST00000564288	MCC	P23508	829 aa		5.24	□□□□□ -1.57
MACF1-231	ENST00000564288	PDE3A	Q14432	1141 aa		5.24	□□□□□ -1.57
MACF1-231	ENST00000564288	HSPA5	P11021	654 aa	Known RBP	5.24	□□□□□ -1.57
MACF1-231	ENST00000564288	USP8	P40818	1118 aa		5.24	□□□□□ -1.57
MACF1-231	ENST00000564288	MCM2	P49736	904 aa		5.23	□□□□□ -1.57
MACF1-231	ENST00000564288	PLCB2	Q00722	1185 aa		5.23	□□□□□ -1.57
MACF1-231	ENST00000564288	UVSSA	Q2YD98	709 aa		5.23	□□□□□ -1.57
MACF1-231	ENST00000564288	SASS6	Q6UVJ0	657 aa		5.23	□□□□□ -1.57
MACF1-231	ENST00000564288	FAM184A	Q8NB25	1140 aa		5.23	□□□□□ -1.57
MACF1-231	ENST00000564288	OGFR	Q9NZT2	677 aa		5.23	□□□□□ -1.57
MACF1-231	ENST00000564288	ARID3A	Q99856	593 aa		5.23	□□□□□ -1.57
MACF1-231	ENST00000564288	NAP1L2	Q9ULW6	460 aa	Predicted RBP	5.23	□□□□□ -1.57
MACF1-231	ENST00000564288	RNF20	Q5VTR2	975 aa		5.23	□□□□□ -1.57
MACF1-231	ENST00000564288	CREBRF	Q8IUR6	639 aa		5.23	□□□□□ -1.57
MACF1-231	ENST00000564288	PNISR	Q8TF01	805 aa	Known RBP	5.23	□□□□□ -1.57
MACF1-231	ENST00000564288	TPM4	P67936	248 aa		5.23	□□□□□ -1.57
MACF1-231	ENST00000564288	ATAD2	Q6PL18	1390 aa		5.23	□□□□□ -1.57
MACF1-231	ENST00000564288	EXOC6	Q8TAG9	804 aa		5.22	□□□□□ -1.57
MACF1-231	ENST00000564288	NLRP13	Q86W25	1043 aa		5.22	□□□□□ -1.57
MACF1-231	ENST00000564288	RRP1	P56182	461 aa	Known RBP	5.22	□□□□□ -1.57
MACF1-231	ENST00000564288	SLC4A1AP	Q9BWU0	796 aa	Known RBP	5.22	□□□□□ -1.57
MACF1-231	ENST00000564288	ARGLU1	Q9NWB6	273 aa	Predicted RBP	5.22	□□□□□ -1.57
MACF1-231	ENST00000564288	KCNJ4	P48050	445 aa		5.22	□□□□□ -1.57
MACF1-231	ENST00000564288	CFAP53	Q96M91	514 aa		5.22	□□□□□ -1.57
MACF1-231	ENST00000564288	ST18	O60284	1047 aa		5.22	□□□□□ -1.57
MACF1-231	ENST00000564288	TSPY4	P0CV99	314 aa		5.22	□□□□□ -1.57
MACF1-231	ENST00000564288	TSPY10	P0CW01	314 aa		5.22	□□□□□ -1.57
MACF1-231	ENST00000564288	CCDC7	Q96M83	1385 aa		5.22	□□□□□ -1.57
MACF1-231	ENST00000564288	CGNL1	Q0VF96	1302 aa		5.22	□□□□□ -1.57
MACF1-231	ENST00000564288	ZNF428	Q96B54	188 aa		5.22	□□□□□ -1.57
MACF1-231	ENST00000564288	CCDC94	Q9BW85	323 aa	Predicted RBP	5.22	□□□□□ -1.57
MACF1-231	ENST00000564288	ERCC4	Q92889	916 aa	Predicted RBP	5.22	□□□□□ -1.57
MACF1-231	ENST00000564288	IRX3	P78415	501 aa	Predicted RBP	5.21	□□□□□ -1.57
MACF1-231	ENST00000564288	HOMEZ	Q8IX15	550 aa		5.21	□□□□□ -1.57
MACF1-231	ENST00000564288		V9GYY5	206 aa	Predicted RBP	5.21	□□□□□ -1.57
MACF1-231	ENST00000564288	MBD3	O95983	291 aa		5.21	□□□□□ -1.58
MACF1-231	ENST00000564288	PDS5B	Q9NTI5	1447 aa		5.21	□□□□□ -1.58
MACF1-231	ENST00000564288	CARMIL1	Q5VZK9	1371 aa		5.21	□□□□□ -1.58
MACF1-231	ENST00000564288	IPO4	Q8TEX9	1081 aa	Known RBP	5.21	□□□□□ -1.58
MACF1-231	ENST00000564288	HFM1	A2PYH4	1435 aa		5.21	□□□□□ -1.58
MACF1-231	ENST00000564288	C22orf23	Q9BZE7	217 aa		5.21	□□□□□ -1.58
MACF1-231	ENST00000564288		E9PSI1	815 aa		5.2	□□□□□ -1.58
MACF1-231	ENST00000564288	CCP110	O43303	1012 aa		5.2	□□□□□ -1.58
MACF1-231	ENST00000564288	BMS1	Q14692	1282 aa	Known RBP	5.2	□□□□□ -1.58
MACF1-231	ENST00000564288	NCAPD3	P42695	1498 aa		5.2	□□□□□ -1.58
MACF1-231	ENST00000564288	CARD11	Q9BXL7	1154 aa		5.2	□□□□□ -1.58
MACF1-231	ENST00000564288	CCDC34	Q96HJ3	373 aa		5.2	□□□□□ -1.58
MACF1-231	ENST00000564288	SPRYD3	Q8NCJ5	442 aa		5.2	□□□□□ -1.58
MACF1-231	ENST00000564288	TUBB	P07437	444 aa		5.2	□□□□□ -1.58
MACF1-231	ENST00000564288	PPP4R3B	Q5MIZ7	849 aa		5.2	□□□□□ -1.58
MACF1-231	ENST00000564288	CC2D1B	Q5T0F9	858 aa	Known RBP	5.2	□□□□□ -1.58
MACF1-231	ENST00000564288	KIF15	Q9NS87	1388 aa		5.2	□□□□□ -1.58
MACF1-231	ENST00000564288	KIF2A	O00139	706 aa	Predicted RBP	5.2	□□□□□ -1.58
MACF1-231	ENST00000564288	EFCC1	Q9HA90	598 aa		5.2	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms