RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 RAB3GAP2Q9H2M9 1393 aa19.25■□□□□ 0.67
SPG7-209ENST00000564047 DUOX2Q9NRD8 1548 aa19.24■□□□□ 0.67
SPG7-209ENST00000564047 ANKRD50Q9ULJ7 1429 aa19.24■□□□□ 0.67
SPG7-209ENST00000564047 ACIN1Q9UKV3 1341 aaKnown RBP19.22■□□□□ 0.67
SPG7-209ENST00000564047 MLECQ14165 292 aa19.21■□□□□ 0.67
SPG7-209ENST00000564047 PREX1Q8TCU6 1659 aa19.2■□□□□ 0.66
SPG7-209ENST00000564047 DHX29Q7Z478 1369 aaKnown RBP19.2■□□□□ 0.66
SPG7-209ENST00000564047 SIGLEC1Q9BZZ2 1709 aa19.2■□□□□ 0.66
SPG7-209ENST00000564047 ERBINQ96RT1 1412 aa19.2■□□□□ 0.66
SPG7-209ENST00000564047 YEATS2Q9ULM3 1422 aa19.2■□□□□ 0.66
SPG7-209ENST00000564047 DMRT2Q9Y5R5 561 aa19.2■□□□□ 0.66
SPG7-209ENST00000564047 SPATA31D1Q6ZQQ2 1576 aa19.19■□□□□ 0.66
SPG7-209ENST00000564047 ABCA6Q8N139 1617 aa19.18■□□□□ 0.66
SPG7-209ENST00000564047 A2MP01023 1474 aa19.18■□□□□ 0.66
SPG7-209ENST00000564047 DIP2CQ9Y2E4 1556 aa19.18■□□□□ 0.66
SPG7-209ENST00000564047 ATP10AO60312 1499 aa19.16■□□□□ 0.66
SPG7-209ENST00000564047 STRCQ7RTU9 1775 aa19.14■□□□□ 0.65
SPG7-209ENST00000564047 SETD1BQ9UPS6 1966 aaKnown RBP19.13■□□□□ 0.65
SPG7-209ENST00000564047 REREQ9P2R6 1566 aa19.13■□□□□ 0.65
SPG7-209ENST00000564047 EIF2AK4Q9P2K8 1649 aaKnown RBP19.11■□□□□ 0.65
SPG7-209ENST00000564047 KIF3BO15066 747 aa19.09■□□□□ 0.65
SPG7-209ENST00000564047 TRIM52Q96A61 297 aa19.09■□□□□ 0.65
SPG7-209ENST00000564047 UHRF1BP1Q6BDS2 1440 aa19.08■□□□□ 0.65
SPG7-209ENST00000564047 AGLP35573 1532 aa19.07■□□□□ 0.64
SPG7-209ENST00000564047 UNC13BO14795 1591 aa19.06■□□□□ 0.64
SPG7-209ENST00000564047 CEBPAP49715 358 aaPredicted RBP19.06■□□□□ 0.64
SPG7-209ENST00000564047 KDM5DQ9BY66 1539 aa19.05■□□□□ 0.64
SPG7-209ENST00000564047 NUP155O75694 1391 aa19.05■□□□□ 0.64
SPG7-209ENST00000564047 DHX57Q6P158 1386 aaKnown RBP19.05■□□□□ 0.64
SPG7-209ENST00000564047 DEPDC5O75140 1603 aa19.04■□□□□ 0.64
SPG7-209ENST00000564047 PTPRTO14522 1441 aa19.03■□□□□ 0.64
SPG7-209ENST00000564047 RNF17Q9BXT8 1623 aaKnown RBP19.03■□□□□ 0.64
SPG7-209ENST00000564047 MPHOSPH9Q99550 1183 aa19.02■□□□□ 0.64
SPG7-209ENST00000564047 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.02■□□□□ 0.645e-9■■■■□ 19.6
SPG7-209ENST00000564047 PRDM15P57071 1507 aaPredicted RBP19.01■□□□□ 0.63
SPG7-209ENST00000564047 KANK1Q14678 1352 aa19.01■□□□□ 0.63
SPG7-209ENST00000564047 PZPP20742 1482 aa19.01■□□□□ 0.63
SPG7-209ENST00000564047 MROH1Q8NDA8 1641 aa19■□□□□ 0.63
SPG7-209ENST00000564047 IQSEC2Q5JU85 1478 aa18.99■□□□□ 0.63
SPG7-209ENST00000564047 GGT6Q6P531 493 aa18.99■□□□□ 0.63
SPG7-209ENST00000564047 CCER1Q8TC90 406 aaPredicted RBP18.99■□□□□ 0.63
SPG7-209ENST00000564047 SLC4A1APQ9BWU0 796 aaKnown RBP18.99■□□□□ 0.63
SPG7-209ENST00000564047 VWDEQ8N2E2 1590 aa18.98■□□□□ 0.63
SPG7-209ENST00000564047 IQGAP3Q86VI3 1631 aa18.98■□□□□ 0.63
SPG7-209ENST00000564047 FAM135AQ9P2D6 1515 aa18.98■□□□□ 0.63
SPG7-209ENST00000564047 PPP6R1Q9UPN7 881 aa18.97■□□□□ 0.63
SPG7-209ENST00000564047 LTBP4Q8N2S1 1624 aa18.96■□□□□ 0.63
SPG7-209ENST00000564047 CLSPNQ9HAW4 1339 aa18.95■□□□□ 0.62
SPG7-209ENST00000564047 C3P01024 1663 aa18.95■□□□□ 0.62
SPG7-209ENST00000564047 LMTK2Q8IWU2 1503 aa18.95■□□□□ 0.62
SPG7-209ENST00000564047 ESF1Q9H501 851 aaKnown RBP18.93■□□□□ 0.62
SPG7-209ENST00000564047 WASHC2CQ9Y4E1 1318 aa18.93■□□□□ 0.62
SPG7-209ENST00000564047 PKD2Q13563 968 aa18.92■□□□□ 0.62
SPG7-209ENST00000564047 ABCC3O15438 1527 aa18.9■□□□□ 0.62
SPG7-209ENST00000564047 TET3O43151 1660 aa18.89■□□□□ 0.61
SPG7-209ENST00000564047 ZC3H13Q5T200 1668 aaKnown RBP18.89■□□□□ 0.61
SPG7-209ENST00000564047 EFCAB6Q5THR3 1501 aa18.86■□□□□ 0.61
SPG7-209ENST00000564047 FOXD1Q16676 465 aa18.86■□□□□ 0.61
SPG7-209ENST00000564047 ARHGAP31Q2M1Z3 1444 aa18.85■□□□□ 0.61
SPG7-209ENST00000564047 ANKRD30BQ9BXX2 1392 aa18.85■□□□□ 0.61
SPG7-209ENST00000564047 CEP152O94986 1710 aa18.85■□□□□ 0.61
SPG7-209ENST00000564047 RPRD2Q5VT52 1461 aaKnown RBP18.84■□□□□ 0.61
SPG7-209ENST00000564047 UBAP1LF5GYI3 381 aa18.84■□□□□ 0.61
SPG7-209ENST00000564047 CNTLNQ9NXG0 1405 aa18.83■□□□□ 0.61
SPG7-209ENST00000564047 CAMSAP1Q5T5Y3 1602 aa18.82■□□□□ 0.6
SPG7-209ENST00000564047 E9PCH4 1651 aa18.82■□□□□ 0.6
SPG7-209ENST00000564047 NPATQ14207 1427 aa18.82■□□□□ 0.6
SPG7-209ENST00000564047 CLTCQ00610 1675 aaKnown RBP18.79■□□□□ 0.6
SPG7-209ENST00000564047 PLA2R1Q13018 1463 aa18.78■□□□□ 0.6
SPG7-209ENST00000564047 ZMYM3Q14202 1370 aa18.78■□□□□ 0.6
SPG7-209ENST00000564047 SIN3AQ96ST3 1273 aa18.77■□□□□ 0.6
SPG7-209ENST00000564047 ZNF335Q9H4Z2 1342 aaPredicted RBP18.76■□□□□ 0.59
SPG7-209ENST00000564047 MROH2AA6NES4 1674 aa18.76■□□□□ 0.59
SPG7-209ENST00000564047 NOS1P29475 1434 aa18.75■□□□□ 0.59
SPG7-209ENST00000564047 TRPM2O94759 1503 aa18.75■□□□□ 0.59
SPG7-209ENST00000564047 ZEB1P37275 1124 aaPredicted RBP18.74■□□□□ 0.59
SPG7-209ENST00000564047 CCDC144AA2RUR9 1427 aa18.74■□□□□ 0.59
SPG7-209ENST00000564047 NCKAP5LQ9HCH0 1330 aa18.74■□□□□ 0.59
SPG7-209ENST00000564047 NEUROD1Q13562 356 aa18.73■□□□□ 0.59
SPG7-209ENST00000564047 SPHKAPQ2M3C7 1700 aa18.72■□□□□ 0.59
SPG7-209ENST00000564047 ERVK-7P63135 1459 aa18.71■□□□□ 0.59
SPG7-209ENST00000564047 TIMELESSQ9UNS1 1208 aa18.71■□□□□ 0.59
SPG7-209ENST00000564047 FBXO31Q5XUX0 539 aaPredicted RBP18.7■□□□□ 0.58
SPG7-209ENST00000564047 ZNF142P52746 1687 aaPredicted RBP18.69■□□□□ 0.58
SPG7-209ENST00000564047 MED1Q15648 1581 aaPredicted RBP18.69■□□□□ 0.58
SPG7-209ENST00000564047 SLC52A1Q9NWF4 448 aa18.68■□□□□ 0.58
SPG7-209ENST00000564047 SCAF1Q9H7N4 1312 aaKnown RBP18.68■□□□□ 0.58
SPG7-209ENST00000564047 MYO3AQ8NEV4 1616 aa18.67■□□□□ 0.58
SPG7-209ENST00000564047 SYNMO15061 1565 aa18.67■□□□□ 0.58
SPG7-209ENST00000564047 CLTCL1P53675 1640 aa18.66■□□□□ 0.58
SPG7-209ENST00000564047 TONSLQ96HA7 1378 aa18.66■□□□□ 0.58
SPG7-209ENST00000564047 CEP170BQ9Y4F5 1589 aaPredicted RBP18.65■□□□□ 0.58
SPG7-209ENST00000564047 HSPA1LP34931 641 aa18.64■□□□□ 0.57
SPG7-209ENST00000564047 TNRQ92752 1358 aa18.64■□□□□ 0.57
SPG7-209ENST00000564047 UGGT1Q9NYU2 1555 aa18.64■□□□□ 0.57
SPG7-209ENST00000564047 PIK3C2BO00750 1634 aa18.63■□□□□ 0.57
SPG7-209ENST00000564047 TOM1O60784 492 aa18.63■□□□□ 0.57
SPG7-209ENST00000564047 PIP4K2BP78356 416 aa18.62■□□□□ 0.57
SPG7-209ENST00000564047 IDI1Q13907 227 aa18.62■□□□□ 0.57
SPG7-209ENST00000564047 SPATA31E1Q6ZUB1 1445 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms