RNA–Protein interactions for RNA: ENST00000562570.1

AC009041.2-203, humanhuman

TSL 1 (best)

Gene AC009041.2, Length 3,222 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.2-203ENST00000562570 GCC2Q8IWJ2 1684 aa23.79■■□□□ 1.4
AC009041.2-203ENST00000562570 CCDC146Q8IYE0 955 aa23.79■■□□□ 1.4
AC009041.2-203ENST00000562570 ABCA8O94911 1581 aa23.79■■□□□ 1.4
AC009041.2-203ENST00000562570 NEUROD2Q15784 382 aa23.79■■□□□ 1.4
AC009041.2-203ENST00000562570 SPAG9O60271 1321 aaKnown RBP23.78■■□□□ 1.4
AC009041.2-203ENST00000562570 MSH5O43196 834 aa23.78■■□□□ 1.4
AC009041.2-203ENST00000562570 NBR1Q14596 966 aa23.78■■□□□ 1.4
AC009041.2-203ENST00000562570 ANP32EQ9BTT0 268 aa23.77■■□□□ 1.4
AC009041.2-203ENST00000562570 SPATA31E1Q6ZUB1 1445 aa23.76■■□□□ 1.39
AC009041.2-203ENST00000562570 CLASP1Q7Z460 1538 aa23.75■■□□□ 1.39
AC009041.2-203ENST00000562570 DHX29Q7Z478 1369 aaKnown RBP23.73■■□□□ 1.39
AC009041.2-203ENST00000562570 EXOC6Q8TAG9 804 aa23.73■■□□□ 1.39
AC009041.2-203ENST00000562570 NUDCQ9Y266 331 aa23.73■■□□□ 1.39
AC009041.2-203ENST00000562570 PLPPR3Q6T4P5 718 aa23.72■■□□□ 1.39
AC009041.2-203ENST00000562570 SYCP2Q9BX26 1530 aa23.71■■□□□ 1.39
AC009041.2-203ENST00000562570 CFAP70Q5T0N1 1121 aa23.7■■□□□ 1.38
AC009041.2-203ENST00000562570 KNSTRNQ9Y448 316 aa23.69■■□□□ 1.38
AC009041.2-203ENST00000562570 DISP3Q9P2K9 1392 aa23.69■■□□□ 1.38
AC009041.2-203ENST00000562570 TMEM132EQ6IEE7 984 aa23.68■■□□□ 1.38
AC009041.2-203ENST00000562570 TMF1P82094 1093 aa23.67■■□□□ 1.38
AC009041.2-203ENST00000562570 TRAK1Q9UPV9 953 aa23.66■■□□□ 1.38
AC009041.2-203ENST00000562570 MYBBP1AQ9BQG0 1328 aaKnown RBP23.65■■□□□ 1.38
AC009041.2-203ENST00000562570 SHROOM2Q13796 1616 aa23.65■■□□□ 1.38
AC009041.2-203ENST00000562570 ABCC2Q92887 1545 aa23.65■■□□□ 1.38
AC009041.2-203ENST00000562570 BCORL1Q5H9F3 1711 aa23.65■■□□□ 1.38
AC009041.2-203ENST00000562570 BCL11AQ9H165 835 aa23.65■■□□□ 1.38
AC009041.2-203ENST00000562570 KTN1Q86UP2 1357 aaKnown RBP23.63■■□□□ 1.37
AC009041.2-203ENST00000562570 ADAMTS8Q9UP79 889 aa23.63■■□□□ 1.37
AC009041.2-203ENST00000562570 ABCC10Q5T3U5 1492 aa23.63■■□□□ 1.37
AC009041.2-203ENST00000562570 TRAPPC8Q9Y2L5 1435 aa23.63■■□□□ 1.37
AC009041.2-203ENST00000562570 CCDC141Q6ZP82 1450 aa23.62■■□□□ 1.37
AC009041.2-203ENST00000562570 SCAPERQ9BY12 1400 aa23.62■■□□□ 1.37
AC009041.2-203ENST00000562570 WDR43Q15061 677 aaKnown RBP eCLIP23.62■■□□□ 1.37
AC009041.2-203ENST00000562570 STK26Q9P289 416 aa23.62■■□□□ 1.37
AC009041.2-203ENST00000562570 RCAN3Q9UKA8 241 aa23.61■■□□□ 1.37
AC009041.2-203ENST00000562570 MBD5Q9P267 1494 aa23.61■■□□□ 1.37
AC009041.2-203ENST00000562570 NLRP13Q86W25 1043 aa23.61■■□□□ 1.37
AC009041.2-203ENST00000562570 RAPGEF3O95398 923 aa23.58■■□□□ 1.37
AC009041.2-203ENST00000562570 RRP7AQ9Y3A4 280 aaKnown RBP23.58■■□□□ 1.37
AC009041.2-203ENST00000562570 CDC42BPAQ5VT25 1732 aa23.57■■□□□ 1.36
AC009041.2-203ENST00000562570 TESK2Q96S53 571 aa23.57■■□□□ 1.36
AC009041.2-203ENST00000562570 RSPH4AQ5TD94 716 aa23.56■■□□□ 1.36
AC009041.2-203ENST00000562570 FAM135AQ9P2D6 1515 aa23.56■■□□□ 1.36
AC009041.2-203ENST00000562570 RALBP1Q15311 655 aa23.55■■□□□ 1.36
AC009041.2-203ENST00000562570 MLECQ14165 292 aa23.54■■□□□ 1.36
AC009041.2-203ENST00000562570 C20orf194Q5TEA3 1177 aa23.54■■□□□ 1.36
AC009041.2-203ENST00000562570 ASXL2Q76L83 1435 aa23.53■■□□□ 1.36
AC009041.2-203ENST00000562570 ITSN2Q9NZM3 1697 aa23.53■■□□□ 1.36
AC009041.2-203ENST00000562570 ARHGEF12Q9NZN5 1544 aa23.51■■□□□ 1.35
AC009041.2-203ENST00000562570 TTC37Q6PGP7 1564 aa23.51■■□□□ 1.35
AC009041.2-203ENST00000562570 PER1O15534 1290 aaPredicted RBP23.51■■□□□ 1.35
AC009041.2-203ENST00000562570 ADGRF5Q8IZF2 1346 aa23.51■■□□□ 1.35
AC009041.2-203ENST00000562570 SAMD9LQ8IVG5 1584 aa23.51■■□□□ 1.35
AC009041.2-203ENST00000562570 PAK3O75914 559 aaPredicted RBP23.51■■□□□ 1.35
AC009041.2-203ENST00000562570 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.5■■□□□ 1.35
AC009041.2-203ENST00000562570 CFAP65Q6ZU64 1925 aaKnown RBP23.5■■□□□ 1.35
AC009041.2-203ENST00000562570 PLA2R1Q13018 1463 aa23.49■■□□□ 1.35
AC009041.2-203ENST00000562570 ZCCHC11Q5TAX3 1644 aaKnown RBP23.49■■□□□ 1.35
AC009041.2-203ENST00000562570 ADCY10Q96PN6 1610 aa23.49■■□□□ 1.35
AC009041.2-203ENST00000562570 ADGRL2O95490 1459 aa23.49■■□□□ 1.35
AC009041.2-203ENST00000562570 RRP1P56182 461 aaKnown RBP23.48■■□□□ 1.35
AC009041.2-203ENST00000562570 APAF1O14727 1248 aa23.47■■□□□ 1.35
AC009041.2-203ENST00000562570 CRBNQ96SW2 442 aa23.47■■□□□ 1.35
AC009041.2-203ENST00000562570 PRAG1Q86YV5 1406 aa23.46■■□□□ 1.35
AC009041.2-203ENST00000562570 A2MP01023 1474 aa23.45■■□□□ 1.35
AC009041.2-203ENST00000562570 RGS3P49796 1198 aa23.45■■□□□ 1.34
AC009041.2-203ENST00000562570 FAM69CQ0P6D2 419 aa23.45■■□□□ 1.34
AC009041.2-203ENST00000562570 BCL2L13Q9BXK5 485 aa23.45■■□□□ 1.34
AC009041.2-203ENST00000562570 SLC12A5Q9H2X9 1139 aa23.45■■□□□ 1.34
AC009041.2-203ENST00000562570 RALGAPBQ86X10 1494 aa23.43■■□□□ 1.34
AC009041.2-203ENST00000562570 LAS1LQ9Y4W2 734 aaKnown RBP23.42■■□□□ 1.34
AC009041.2-203ENST00000562570 PPP2R1AP30153 589 aa23.42■■□□□ 1.34
AC009041.2-203ENST00000562570 WASHC2CQ9Y4E1 1318 aa23.42■■□□□ 1.34
AC009041.2-203ENST00000562570 PPM1GO15355 546 aaPredicted RBP23.42■■□□□ 1.34
AC009041.2-203ENST00000562570 FRAT1Q92837 279 aaPredicted RBP23.42■■□□□ 1.34
AC009041.2-203ENST00000562570 ERBINQ96RT1 1412 aa23.41■■□□□ 1.34
AC009041.2-203ENST00000562570 WDR7Q9Y4E6 1490 aa23.41■■□□□ 1.34
AC009041.2-203ENST00000562570 KDM5CP41229 1560 aa23.4■■□□□ 1.34
AC009041.2-203ENST00000562570 SLC4A3P48751 1232 aa23.39■■□□□ 1.34
AC009041.2-203ENST00000562570 CANXP27824 592 aaKnown RBP23.39■■□□□ 1.33
AC009041.2-203ENST00000562570 CDC42BPBQ9Y5S2 1711 aa23.38■■□□□ 1.33
AC009041.2-203ENST00000562570 PLCH2O75038 1416 aa23.37■■□□□ 1.33
AC009041.2-203ENST00000562570 ADGBQ8N7X0 1667 aa23.37■■□□□ 1.33
AC009041.2-203ENST00000562570 SMG6Q86US8 1419 aaKnown RBP23.37■■□□□ 1.33
AC009041.2-203ENST00000562570 ANP32AP39687 249 aaKnown RBP23.37■■□□□ 1.33
AC009041.2-203ENST00000562570 BRD4O60885 1362 aaPredicted RBP23.36■■□□□ 1.33
AC009041.2-203ENST00000562570 STAG3Q9UJ98 1225 aa23.36■■□□□ 1.33
AC009041.2-203ENST00000562570 UHRF1BP1LA0JNW5 1464 aa23.36■■□□□ 1.33
AC009041.2-203ENST00000562570 SPINK5Q9NQ38 1064 aaPredicted RBP23.35■■□□□ 1.33
AC009041.2-203ENST00000562570 FBLN1P23142 703 aa23.34■■□□□ 1.33
AC009041.2-203ENST00000562570 UGGT1Q9NYU2 1555 aa23.34■■□□□ 1.33
AC009041.2-203ENST00000562570 KANK1Q14678 1352 aa23.34■■□□□ 1.33
AC009041.2-203ENST00000562570 BCAR3O75815 825 aa23.33■■□□□ 1.33
AC009041.2-203ENST00000562570 CLUAP1Q96AJ1 413 aa23.33■■□□□ 1.33
AC009041.2-203ENST00000562570 CABP2Q9NPB3 220 aa23.33■■□□□ 1.33
AC009041.2-203ENST00000562570 DMRT2Q9Y5R5 561 aa23.33■■□□□ 1.33
AC009041.2-203ENST00000562570 FANCAO15360 1455 aa23.32■■□□□ 1.32
AC009041.2-203ENST00000562570 CD109Q6YHK3 1445 aa23.32■■□□□ 1.32
AC009041.2-203ENST00000562570 ARID4BQ4LE39 1312 aaPredicted RBP23.31■■□□□ 1.32
AC009041.2-203ENST00000562570 UHRF1BP1Q6BDS2 1440 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms