RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 BCORL1Q5H9F3 1711 aa15.46■□□□□ 0.07
LRRC28-221ENST00000561276 GGT6Q6P531 493 aa15.46■□□□□ 0.07
LRRC28-221ENST00000561276 EIF2AK4Q9P2K8 1649 aaKnown RBP15.46■□□□□ 0.06
LRRC28-221ENST00000561276 ANKRD50Q9ULJ7 1429 aa15.45■□□□□ 0.06
LRRC28-221ENST00000561276 GCC2Q8IWJ2 1684 aa15.44■□□□□ 0.06
LRRC28-221ENST00000561276 NAIPQ13075 1403 aa15.44■□□□□ 0.06
LRRC28-221ENST00000561276 ERBINQ96RT1 1412 aa15.44■□□□□ 0.06
LRRC28-221ENST00000561276 DMRT2Q9Y5R5 561 aa15.43■□□□□ 0.06
LRRC28-221ENST00000561276 HFM1A2PYH4 1435 aa15.43■□□□□ 0.06
LRRC28-221ENST00000561276 SCAF1Q9H7N4 1312 aaKnown RBP15.43■□□□□ 0.06
LRRC28-221ENST00000561276 ADAMTSL3P82987 1691 aa15.41■□□□□ 0.06
LRRC28-221ENST00000561276 RNF17Q9BXT8 1623 aaKnown RBP15.4■□□□□ 0.06
LRRC28-221ENST00000561276 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.4■□□□□ 0.06
LRRC28-221ENST00000561276 FER1L4A9Z1Z3 1794 aa15.39■□□□□ 0.05
LRRC28-221ENST00000561276 KDM4FA0A1W2PPD8 638 aa15.39■□□□□ 0.05
LRRC28-221ENST00000561276 ESF1Q9H501 851 aaKnown RBP15.39■□□□□ 0.05
LRRC28-221ENST00000561276 DEPDC5O75140 1603 aa15.39■□□□□ 0.05
LRRC28-221ENST00000561276 SETD5Q9C0A6 1442 aa15.38■□□□□ 0.05
LRRC28-221ENST00000561276 MADDQ8WXG6 1647 aa15.37■□□□□ 0.05
LRRC28-221ENST00000561276 CLTCQ00610 1675 aaKnown RBP15.37■□□□□ 0.05
LRRC28-221ENST00000561276 WASHC2CQ9Y4E1 1318 aa15.37■□□□□ 0.05
LRRC28-221ENST00000561276 MROH1Q8NDA8 1641 aa15.36■□□□□ 0.05
LRRC28-221ENST00000561276 RIMS1Q86UR5 1692 aaKnown RBP15.35■□□□□ 0.05
LRRC28-221ENST00000561276 CEP152O94986 1710 aa15.35■□□□□ 0.05
LRRC28-221ENST00000561276 UNC13BO14795 1591 aa15.35■□□□□ 0.05
LRRC28-221ENST00000561276 PCGF6Q9BYE7 350 aa15.34■□□□□ 0.05
LRRC28-221ENST00000561276 KANK1Q14678 1352 aa15.34■□□□□ 0.05
LRRC28-221ENST00000561276 PRDM15P57071 1507 aaPredicted RBP15.33■□□□□ 0.05
LRRC28-221ENST00000561276 TRIM52Q96A61 297 aa15.33■□□□□ 0.04
LRRC28-221ENST00000561276 RAB3GAP2Q9H2M9 1393 aa15.33■□□□□ 0.04
LRRC28-221ENST00000561276 ZC3H13Q5T200 1668 aaKnown RBP15.32■□□□□ 0.04
LRRC28-221ENST00000561276 NUP155O75694 1391 aa15.32■□□□□ 0.04
LRRC28-221ENST00000561276 MROH2AA6NES4 1674 aa15.32■□□□□ 0.04
LRRC28-221ENST00000561276 CFAP65Q6ZU64 1925 aaKnown RBP15.31■□□□□ 0.04
LRRC28-221ENST00000561276 KDM5DQ9BY66 1539 aa15.31■□□□□ 0.04
LRRC28-221ENST00000561276 VWDEQ8N2E2 1590 aa15.31■□□□□ 0.04
LRRC28-221ENST00000561276 C3P01024 1663 aa15.3■□□□□ 0.04
LRRC28-221ENST00000561276 HRCP23327 699 aa15.3■□□□□ 0.04
LRRC28-221ENST00000561276 CEBPAP49715 358 aaPredicted RBP15.3■□□□□ 0.04
LRRC28-221ENST00000561276 ZMYM3Q14202 1370 aa15.3■□□□□ 0.04
LRRC28-221ENST00000561276 CNTLNQ9NXG0 1405 aa15.3■□□□□ 0.04
LRRC28-221ENST00000561276 IQGAP3Q86VI3 1631 aa15.29■□□□□ 0.04
LRRC28-221ENST00000561276 ABCC3O15438 1527 aa15.29■□□□□ 0.04
LRRC28-221ENST00000561276 FAM135AQ9P2D6 1515 aa15.29■□□□□ 0.04
LRRC28-221ENST00000561276 ACIN1Q9UKV3 1341 aaKnown RBP15.29■□□□□ 0.04
LRRC28-221ENST00000561276 CAMSAP1Q5T5Y3 1602 aa15.28■□□□□ 0.04
LRRC28-221ENST00000561276 PTPRMP28827 1452 aa15.28■□□□□ 0.04
LRRC28-221ENST00000561276 TET3O43151 1660 aa15.26■□□□□ 0.03
LRRC28-221ENST00000561276 LMTK2Q8IWU2 1503 aa15.26■□□□□ 0.03
LRRC28-221ENST00000561276 E9PCH4 1651 aa15.25■□□□□ 0.03
LRRC28-221ENST00000561276 SLC4A1APQ9BWU0 796 aaKnown RBP15.24■□□□□ 0.03
LRRC28-221ENST00000561276 FBXO31Q5XUX0 539 aaPredicted RBP15.23■□□□□ 0.03
LRRC28-221ENST00000561276 MPHOSPH9Q99550 1183 aa15.23■□□□□ 0.03
LRRC28-221ENST00000561276 PZPP20742 1482 aa15.22■□□□□ 0.03
LRRC28-221ENST00000561276 ARHGAP31Q2M1Z3 1444 aa15.22■□□□□ 0.03
LRRC28-221ENST00000561276 EFCAB6Q5THR3 1501 aa15.22■□□□□ 0.03
LRRC28-221ENST00000561276 NPATQ14207 1427 aa15.2■□□□□ 0.02
LRRC28-221ENST00000561276 PREX1Q8TCU6 1659 aa15.2■□□□□ 0.02
LRRC28-221ENST00000561276 PKD2Q13563 968 aa15.2■□□□□ 0.02
LRRC28-221ENST00000561276 SETD1BQ9UPS6 1966 aaKnown RBP15.2■□□□□ 0.02
LRRC28-221ENST00000561276 RPRD2Q5VT52 1461 aaKnown RBP15.18■□□□□ 0.02
LRRC28-221ENST00000561276 SPATA31D1Q6ZQQ2 1576 aa15.16■□□□□ 0.02
LRRC28-221ENST00000561276 ERVK-7P63135 1459 aa15.15■□□□□ 0.02
LRRC28-221ENST00000561276 SPHKAPQ2M3C7 1700 aa15.15■□□□□ 0.02
LRRC28-221ENST00000561276 TNRQ92752 1358 aa15.13■□□□□ 0.01
LRRC28-221ENST00000561276 NOS1P29475 1434 aa15.13■□□□□ 0.01
LRRC28-221ENST00000561276 SYNMO15061 1565 aa15.12■□□□□ 0.01
LRRC28-221ENST00000561276 IDI1Q13907 227 aa15.11■□□□□ 0.01
LRRC28-221ENST00000561276 SLC52A1Q9NWF4 448 aa15.11■□□□□ 0.01
LRRC28-221ENST00000561276 MYO3AQ8NEV4 1616 aa15.1■□□□□ 0.01
LRRC28-221ENST00000561276 PTPRTO14522 1441 aa15.1■□□□□ 0.01
LRRC28-221ENST00000561276 PLA2R1Q13018 1463 aa15.09■□□□□ 0.01
LRRC28-221ENST00000561276 UHRF1BP1Q6BDS2 1440 aa15.09■□□□□ 0.01
LRRC28-221ENST00000561276 NLRP1Q9C000 1473 aa15.08■□□□□ 0.01
LRRC28-221ENST00000561276 UGGT1Q9NYU2 1555 aa15.08■□□□□ 0
LRRC28-221ENST00000561276 PIK3C2BO00750 1634 aa15.08■□□□□ 0
LRRC28-221ENST00000561276 DHX57Q6P158 1386 aaKnown RBP15.08■□□□□ 0
LRRC28-221ENST00000561276 KIF1BO60333 1816 aa15.07■□□□□ 0
LRRC28-221ENST00000561276 MYO5BQ9ULV0 1848 aa15.07■□□□□ 0
LRRC28-221ENST00000561276 TRPM2O94759 1503 aa15.07■□□□□ 0
LRRC28-221ENST00000561276 ZNF142P52746 1687 aaPredicted RBP15.06■□□□□ 0
LRRC28-221ENST00000561276 PPP4R3CPQ6ZMV5 832 aa15.06■□□□□ 0
LRRC28-221ENST00000561276 A2ML1A8K2U0 1454 aa15.06■□□□□ 0
LRRC28-221ENST00000561276 CEP170BQ9Y4F5 1589 aaPredicted RBP15.06■□□□□ 0
LRRC28-221ENST00000561276 CLTCL1P53675 1640 aa15.06■□□□□ 0
LRRC28-221ENST00000561276 UBR1Q8IWV7 1749 aa15.06■□□□□ 0
LRRC28-221ENST00000561276 CHGAP10645 457 aaKnown RBP15.05■□□□□ -0
LRRC28-221ENST00000561276 STAG3Q9UJ98 1225 aa15.05■□□□□ -0
LRRC28-221ENST00000561276 ANKRD30BQ9BXX2 1392 aa15.05■□□□□ -0
LRRC28-221ENST00000561276 KDM5AP29375 1690 aaKnown RBP15.04■□□□□ -0
LRRC28-221ENST00000561276 LMTK3Q96Q04 1460 aa15.04■□□□□ -0
LRRC28-221ENST00000561276 THEMISQ8N1K5 641 aaPredicted RBP15.04■□□□□ -0
LRRC28-221ENST00000561276 TMEM131LA2VDJ0 1609 aa15.03■□□□□ -0
LRRC28-221ENST00000561276 CCDC144AA2RUR9 1427 aa15.02■□□□□ -0
LRRC28-221ENST00000561276 HSPA2P54652 639 aa15.02■□□□□ -0
LRRC28-221ENST00000561276 ADGRB3O60242 1522 aa14.99□□□□□ -0.01
LRRC28-221ENST00000561276 SIN3AQ96ST3 1273 aa14.99□□□□□ -0.01
LRRC28-221ENST00000561276 RGL3Q3MIN7 710 aa14.98□□□□□ -0.01
LRRC28-221ENST00000561276 ZNF326Q5BKZ1 582 aaKnown RBP14.98□□□□□ -0.01
LRRC28-221ENST00000561276 NEUROD1Q13562 356 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms