RNA–Protein interactions for RNA: ENST00000560540.5

SHF-207, Transcript of Src homology 2 domain containing F, humanhuman

TSL 5 BASIC

Gene SHF, Length 2,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-207ENST00000560540 SPATA31E1Q6ZUB1 1445 aa33.88■■■■□ 3.01
SHF-207ENST00000560540 PPRC1Q5VV67 1664 aaKnown RBP33.86■■■■□ 3.01
SHF-207ENST00000560540 NEO1Q92859 1461 aa33.86■■■■□ 3.01
SHF-207ENST00000560540 PRKRIP1Q9H875 184 aaPredicted RBP33.85■■■■□ 3.01
SHF-207ENST00000560540 ANKRD30AQ9BXX3 1397 aa33.84■■■■□ 3.01
SHF-207ENST00000560540 FOXD1Q16676 465 aa33.82■■■■□ 3
SHF-207ENST00000560540 C11orf95C9JLR9 678 aaPredicted RBP33.81■■■■□ 3
SHF-207ENST00000560540 MAST1Q9Y2H9 1570 aa33.8■■■■□ 3
SHF-207ENST00000560540 TRHP20396 242 aaPredicted RBP33.8■■■■□ 3
SHF-207ENST00000560540 NBPF8Q3BBV2 869 aa33.8■■■■□ 3
SHF-207ENST00000560540 PZPP20742 1482 aa33.78■■■■□ 3
SHF-207ENST00000560540 SPAG9O60271 1321 aaKnown RBP33.76■■■■□ 3
SHF-207ENST00000560540 KIF15Q9NS87 1388 aa33.76■■■□□ 2.99
SHF-207ENST00000560540 CCDC184Q52MB2 194 aa33.75■■■□□ 2.99
SHF-207ENST00000560540 POGZQ7Z3K3 1410 aa33.75■■■□□ 2.99
SHF-207ENST00000560540 ZBED9Q6R2W3 1325 aa33.74■■■□□ 2.99
SHF-207ENST00000560540 RAPGEF3O95398 923 aa33.73■■■□□ 2.99
SHF-207ENST00000560540 SLC4A1APQ9BWU0 796 aaKnown RBP33.73■■■□□ 2.99
SHF-207ENST00000560540 ZNF518AQ6AHZ1 1483 aa33.73■■■□□ 2.99
SHF-207ENST00000560540 KIF7Q2M1P5 1343 aa33.72■■■□□ 2.99
SHF-207ENST00000560540 ZFYVE16Q7Z3T8 1539 aa33.72■■■□□ 2.99
SHF-207ENST00000560540 MRS2Q9HD23 443 aa33.69■■■□□ 2.98
SHF-207ENST00000560540 ANKRD50Q9ULJ7 1429 aa33.68■■■□□ 2.98
SHF-207ENST00000560540 PLXNC1O60486 1568 aa33.68■■■□□ 2.98
SHF-207ENST00000560540 INO80Q9ULG1 1556 aaPredicted RBP33.68■■■□□ 2.98
SHF-207ENST00000560540 RTEL1-TNFRSF6BF6WH68 1400 aa33.67■■■□□ 2.98
SHF-207ENST00000560540 FANCIQ9NVI1 1328 aa33.67■■■□□ 2.98
SHF-207ENST00000560540 PPP4R2Q9NY27 417 aa33.67■■■□□ 2.98
SHF-207ENST00000560540 ATP7AQ04656 1500 aa33.66■■■□□ 2.98
SHF-207ENST00000560540 KDM5CP41229 1560 aa33.66■■■□□ 2.98
SHF-207ENST00000560540 MYT1LQ9UL68 1186 aa33.65■■■□□ 2.98
SHF-207ENST00000560540 IRX6P78412 446 aaPredicted RBP33.65■■■□□ 2.98
SHF-207ENST00000560540 RICTORQ6R327 1708 aa33.63■■■□□ 2.97
SHF-207ENST00000560540 KIDINS220Q9ULH0 1771 aa33.61■■■□□ 2.97
SHF-207ENST00000560540 FAM9BQ8IZU0 186 aa33.6■■■□□ 2.97
SHF-207ENST00000560540 BCORL1Q5H9F3 1711 aa33.59■■■□□ 2.97
SHF-207ENST00000560540 FRMPD1Q5SYB0 1578 aa33.59■■■□□ 2.97
SHF-207ENST00000560540 COL17A1Q9UMD9 1497 aaPredicted RBP33.57■■■□□ 2.96
SHF-207ENST00000560540 DUOX2Q9NRD8 1548 aa33.56■■■□□ 2.96
SHF-207ENST00000560540 MLH3Q9UHC1 1453 aa33.56■■■□□ 2.96
SHF-207ENST00000560540 HECW2Q9P2P5 1572 aa33.56■■■□□ 2.96
SHF-207ENST00000560540 DHX29Q7Z478 1369 aaKnown RBP33.55■■■□□ 2.96
SHF-207ENST00000560540 ARID4BQ4LE39 1312 aaPredicted RBP33.54■■■□□ 2.96
SHF-207ENST00000560540 USP47Q96K76 1375 aa33.51■■■□□ 2.96
SHF-207ENST00000560540 UHRF1BP1Q6BDS2 1440 aa33.5■■■□□ 2.95
SHF-207ENST00000560540 MSH5O43196 834 aa33.49■■■□□ 2.95
SHF-207ENST00000560540 ERBINQ96RT1 1412 aa33.48■■■□□ 2.95
SHF-207ENST00000560540 SMG6Q86US8 1419 aaKnown RBP33.47■■■□□ 2.95
SHF-207ENST00000560540 KDM5DQ9BY66 1539 aa33.47■■■□□ 2.95
SHF-207ENST00000560540 RALGAPBQ86X10 1494 aa33.47■■■□□ 2.95
SHF-207ENST00000560540 ABCA6Q8N139 1617 aa33.46■■■□□ 2.95
SHF-207ENST00000560540 YEATS2Q9ULM3 1422 aa33.45■■■□□ 2.95
SHF-207ENST00000560540 ZMYM4Q5VZL5 1548 aa33.43■■■□□ 2.94
SHF-207ENST00000560540 ROCK2O75116 1388 aaKnown RBP33.42■■■□□ 2.94
SHF-207ENST00000560540 NUP155O75694 1391 aa33.42■■■□□ 2.94
SHF-207ENST00000560540 DIP2CQ9Y2E4 1556 aa33.4■■■□□ 2.94
SHF-207ENST00000560540 A2MP01023 1474 aa33.4■■■□□ 2.94
SHF-207ENST00000560540 PKD2Q13563 968 aa33.39■■■□□ 2.94
SHF-207ENST00000560540 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.38■■■□□ 2.93
SHF-207ENST00000560540 UNC13BO14795 1591 aa33.36■■■□□ 2.93
SHF-207ENST00000560540 KIF3BO15066 747 aa33.35■■■□□ 2.93
SHF-207ENST00000560540 MAGI2Q86UL8 1455 aa33.32■■■□□ 2.92
SHF-207ENST00000560540 E9PCH4 1651 aa33.32■■■□□ 2.92
SHF-207ENST00000560540 RNF123Q5XPI4 1314 aa33.31■■■□□ 2.92
SHF-207ENST00000560540 B4GALNT3Q6L9W6 998 aa33.3■■■□□ 2.92
SHF-207ENST00000560540 NUDCQ9Y266 331 aa33.3■■■□□ 2.92
SHF-207ENST00000560540 EIF2AK4Q9P2K8 1649 aaKnown RBP33.29■■■□□ 2.92
SHF-207ENST00000560540 FAM135AQ9P2D6 1515 aa33.28■■■□□ 2.92
SHF-207ENST00000560540 DEPDC5O75140 1603 aa33.26■■■□□ 2.91
SHF-207ENST00000560540 KTN1Q86UP2 1357 aaKnown RBP33.25■■■□□ 2.91
SHF-207ENST00000560540 ZNF326Q5BKZ1 582 aaKnown RBP33.24■■■□□ 2.91
SHF-207ENST00000560540 ERICH6Q7L0X2 663 aa33.23■■■□□ 2.91
SHF-207ENST00000560540 ATP10AO60312 1499 aa33.23■■■□□ 2.91
SHF-207ENST00000560540 IQGAP3Q86VI3 1631 aa33.23■■■□□ 2.91
SHF-207ENST00000560540 MROH1Q8NDA8 1641 aa33.23■■■□□ 2.91
SHF-207ENST00000560540 ARHGEF40Q8TER5 1519 aa33.19■■■□□ 2.9
SHF-207ENST00000560540 PNISRQ8TF01 805 aaKnown RBP33.18■■■□□ 2.9
SHF-207ENST00000560540 GGT6Q6P531 493 aa33.17■■■□□ 2.9
SHF-207ENST00000560540 PRDM15P57071 1507 aaPredicted RBP33.17■■■□□ 2.9
SHF-207ENST00000560540 RNF17Q9BXT8 1623 aaKnown RBP33.16■■■□□ 2.9
SHF-207ENST00000560540 POLR3GLQ9BT43 218 aa33.16■■■□□ 2.9
SHF-207ENST00000560540 CARD11Q9BXL7 1154 aa33.16■■■□□ 2.9
SHF-207ENST00000560540 LRPPRCP42704 1394 aaKnown RBP33.16■■■□□ 2.9
SHF-207ENST00000560540 SIGLEC1Q9BZZ2 1709 aa33.15■■■□□ 2.9
SHF-207ENST00000560540 BRD4O60885 1362 aaPredicted RBP33.14■■■□□ 2.9
SHF-207ENST00000560540 VWDEQ8N2E2 1590 aa33.14■■■□□ 2.9
SHF-207ENST00000560540 TRPM1Q7Z4N2 1603 aa33.12■■■□□ 2.89
SHF-207ENST00000560540 KANK1Q14678 1352 aa33.11■■■□□ 2.89
SHF-207ENST00000560540 REREQ9P2R6 1566 aa33.11■■■□□ 2.89
SHF-207ENST00000560540 TMC1Q8TDI8 760 aa33.1■■■□□ 2.89
SHF-207ENST00000560540 MYBBP1AQ9BQG0 1328 aaKnown RBP33.08■■■□□ 2.89
SHF-207ENST00000560540 RALBP1Q15311 655 aa33.07■■■□□ 2.88
SHF-207ENST00000560540 LAMC1P11047 1609 aa33.05■■■□□ 2.88
SHF-207ENST00000560540 BCL11AQ9H165 835 aa33.05■■■□□ 2.88
SHF-207ENST00000560540 AGLP35573 1532 aa33.03■■■□□ 2.88
SHF-207ENST00000560540 CEP152O94986 1710 aa33.03■■■□□ 2.88
SHF-207ENST00000560540 ST20-MTHFSA0A0A6YYL1 179 aa33.03■■■□□ 2.88
SHF-207ENST00000560540 TET3O43151 1660 aa33.02■■■□□ 2.88
SHF-207ENST00000560540 CCDC136Q96JN2 1154 aa33.01■■■□□ 2.87
SHF-207ENST00000560540 CNGB1Q14028 1251 aaPredicted RBP33■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms