RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 POGZQ7Z3K3 1410 aa15.49■□□□□ 0.07
SNRPA1-211ENST00000560433 RGL3Q3MIN7 710 aa15.49■□□□□ 0.07
SNRPA1-211ENST00000560433 MAP3K4Q9Y6R4 1608 aa15.48■□□□□ 0.07
SNRPA1-211ENST00000560433 DIP2BQ9P265 1576 aa15.47■□□□□ 0.07
SNRPA1-211ENST00000560433 DHX29Q7Z478 1369 aaKnown RBP15.46■□□□□ 0.07
SNRPA1-211ENST00000560433 CFAP74Q9C0B2 1584 aa15.46■□□□□ 0.07
SNRPA1-211ENST00000560433 GGT6Q6P531 493 aa15.46■□□□□ 0.07
SNRPA1-211ENST00000560433 IQGAP3Q86VI3 1631 aa15.45■□□□□ 0.06
SNRPA1-211ENST00000560433 PLA2R1Q13018 1463 aa15.45■□□□□ 0.06
SNRPA1-211ENST00000560433 DDX10Q13206 875 aaKnown RBP15.45■□□□□ 0.06
SNRPA1-211ENST00000560433 DCAF11Q8TEB1 546 aa15.45■□□□□ 0.06
SNRPA1-211ENST00000560433 NEO1Q92859 1461 aa15.44■□□□□ 0.06
SNRPA1-211ENST00000560433 MAGI2Q86UL8 1455 aa15.43■□□□□ 0.06
SNRPA1-211ENST00000560433 CCDC144AA2RUR9 1427 aa15.43■□□□□ 0.06
SNRPA1-211ENST00000560433 HSPA5P11021 654 aaKnown RBP15.43■□□□□ 0.06
SNRPA1-211ENST00000560433 KDM5CP41229 1560 aa15.42■□□□□ 0.06
SNRPA1-211ENST00000560433 A2MP01023 1474 aa15.42■□□□□ 0.06
SNRPA1-211ENST00000560433 GLI2P10070 1586 aa15.42■□□□□ 0.06
SNRPA1-211ENST00000560433 HECW2Q9P2P5 1572 aa15.41■□□□□ 0.06
SNRPA1-211ENST00000560433 YEATS2Q9ULM3 1422 aa15.4■□□□□ 0.06
SNRPA1-211ENST00000560433 ABCA6Q8N139 1617 aa15.4■□□□□ 0.06
SNRPA1-211ENST00000560433 MLH3Q9UHC1 1453 aa15.4■□□□□ 0.06
SNRPA1-211ENST00000560433 E9PCH4 1651 aa15.39■□□□□ 0.05
SNRPA1-211ENST00000560433 KANK1Q14678 1352 aa15.39■□□□□ 0.05
SNRPA1-211ENST00000560433 FRMPD1Q5SYB0 1578 aa15.39■□□□□ 0.05
SNRPA1-211ENST00000560433 EIF4G2P78344 907 aaKnown RBP eCLIP15.38■□□□□ 0.05
SNRPA1-211ENST00000560433 RICTORQ6R327 1708 aa15.38■□□□□ 0.05
SNRPA1-211ENST00000560433 PPRC1Q5VV67 1664 aaKnown RBP15.38■□□□□ 0.05
SNRPA1-211ENST00000560433 DEPDC5O75140 1603 aa15.38■□□□□ 0.05
SNRPA1-211ENST00000560433 MROH1Q8NDA8 1641 aa15.37■□□□□ 0.05
SNRPA1-211ENST00000560433 CFAP65Q6ZU64 1925 aaKnown RBP15.36■□□□□ 0.05
SNRPA1-211ENST00000560433 KIF13AQ9H1H9 1805 aa15.36■□□□□ 0.05
SNRPA1-211ENST00000560433 YTHDC1Q96MU7 727 aaKnown RBP15.35■□□□□ 0.05
SNRPA1-211ENST00000560433 ATP10AO60312 1499 aa15.34■□□□□ 0.05
SNRPA1-211ENST00000560433 C11orf95C9JLR9 678 aaPredicted RBP15.34■□□□□ 0.05
SNRPA1-211ENST00000560433 DIP2CQ9Y2E4 1556 aa15.34■□□□□ 0.05
SNRPA1-211ENST00000560433 WASHC2CQ9Y4E1 1318 aa15.33■□□□□ 0.05
SNRPA1-211ENST00000560433 EIF2AK4Q9P2K8 1649 aaKnown RBP15.33■□□□□ 0.05
SNRPA1-211ENST00000560433 PRDM15P57071 1507 aaPredicted RBP15.33■□□□□ 0.05
SNRPA1-211ENST00000560433 CEP152O94986 1710 aa15.33■□□□□ 0.04
SNRPA1-211ENST00000560433 UGGT1Q9NYU2 1555 aa15.32■□□□□ 0.04
SNRPA1-211ENST00000560433 COL17A1Q9UMD9 1497 aaPredicted RBP15.32■□□□□ 0.04
SNRPA1-211ENST00000560433 VWDEQ8N2E2 1590 aa15.32■□□□□ 0.04
SNRPA1-211ENST00000560433 TET3O43151 1660 aa15.31■□□□□ 0.04
SNRPA1-211ENST00000560433 WASHC2AQ641Q2 1341 aa15.3■□□□□ 0.04
SNRPA1-211ENST00000560433 NBPF1Q3BBV0 1214 aa15.3■□□□□ 0.04
SNRPA1-211ENST00000560433 CARD11Q9BXL7 1154 aa15.3■□□□□ 0.04
SNRPA1-211ENST00000560433 TRHP20396 242 aaPredicted RBP15.29■□□□□ 0.04
SNRPA1-211ENST00000560433 MLECQ14165 292 aa15.29■□□□□ 0.04
SNRPA1-211ENST00000560433 SPHKAPQ2M3C7 1700 aa15.29■□□□□ 0.04
SNRPA1-211ENST00000560433 CHGAP10645 457 aaKnown RBP15.28■□□□□ 0.04
SNRPA1-211ENST00000560433 POLR3GLQ9BT43 218 aa15.28■□□□□ 0.04
SNRPA1-211ENST00000560433 CLTCL1P53675 1640 aa15.28■□□□□ 0.04
SNRPA1-211ENST00000560433 PTPRTO14522 1441 aa15.27■□□□□ 0.04
SNRPA1-211ENST00000560433 USP47Q96K76 1375 aa15.27■□□□□ 0.03
SNRPA1-211ENST00000560433 RNF17Q9BXT8 1623 aaKnown RBP15.27■□□□□ 0.03
SNRPA1-211ENST00000560433 UHRF1BP1Q6BDS2 1440 aa15.27■□□□□ 0.03
SNRPA1-211ENST00000560433 TRPM2O94759 1503 aa15.26■□□□□ 0.03
SNRPA1-211ENST00000560433 EFCAB6Q5THR3 1501 aa15.26■□□□□ 0.03
SNRPA1-211ENST00000560433 ROCK2O75116 1388 aaKnown RBP15.26■□□□□ 0.03
SNRPA1-211ENST00000560433 NPATQ14207 1427 aa15.26■□□□□ 0.03
SNRPA1-211ENST00000560433 SPATA31E1Q6ZUB1 1445 aa15.26■□□□□ 0.03
SNRPA1-211ENST00000560433 PRAG1Q86YV5 1406 aa15.25■□□□□ 0.03
SNRPA1-211ENST00000560433 SENP3Q9H4L4 574 aaPredicted RBP15.24■□□□□ 0.03
SNRPA1-211ENST00000560433 ST20-MTHFSA0A0A6YYL1 179 aa15.23■□□□□ 0.03
SNRPA1-211ENST00000560433 ABCC3O15438 1527 aa15.23■□□□□ 0.03
SNRPA1-211ENST00000560433 RALGAPBQ86X10 1494 aa15.23■□□□□ 0.03
SNRPA1-211ENST00000560433 ZMYM4Q5VZL5 1548 aa15.21■□□□□ 0.03
SNRPA1-211ENST00000560433 KIF7Q2M1P5 1343 aa15.21■□□□□ 0.03
SNRPA1-211ENST00000560433 CNGB1Q14028 1251 aaPredicted RBP15.21■□□□□ 0.03
SNRPA1-211ENST00000560433 SIGLEC1Q9BZZ2 1709 aa15.21■□□□□ 0.03
SNRPA1-211ENST00000560433 NUTM2DQ5VT03 806 aaPredicted RBP15.21■□□□□ 0.02
SNRPA1-211ENST00000560433 LMTK2Q8IWU2 1503 aa15.21■□□□□ 0.02
SNRPA1-211ENST00000560433 FBXO31Q5XUX0 539 aaPredicted RBP15.2■□□□□ 0.02
SNRPA1-211ENST00000560433 CCDC7Q96M83 1385 aa15.19■□□□□ 0.02
SNRPA1-211ENST00000560433 BCORL1Q5H9F3 1711 aa15.19■□□□□ 0.02
SNRPA1-211ENST00000560433 TRPM1Q7Z4N2 1603 aa15.19■□□□□ 0.02
SNRPA1-211ENST00000560433 CAMSAP1Q5T5Y3 1602 aa15.18■□□□□ 0.02
SNRPA1-211ENST00000560433 ADGRF5Q8IZF2 1346 aa15.17■□□□□ 0.02
SNRPA1-211ENST00000560433 MROH2AA6NES4 1674 aa15.16■□□□□ 0.02
SNRPA1-211ENST00000560433 ANP32CO43423 234 aa15.16■□□□□ 0.02
SNRPA1-211ENST00000560433 ARID4BQ4LE39 1312 aaPredicted RBP15.16■□□□□ 0.02
SNRPA1-211ENST00000560433 KIF1BO60333 1816 aa15.15■□□□□ 0.02
SNRPA1-211ENST00000560433 IDI1Q13907 227 aa15.15■□□□□ 0.02
SNRPA1-211ENST00000560433 CFAP70Q5T0N1 1121 aa15.14■□□□□ 0.01
SNRPA1-211ENST00000560433 MADDQ8WXG6 1647 aa15.12■□□□□ 0.01
SNRPA1-211ENST00000560433 SYNMO15061 1565 aa15.12■□□□□ 0.01
SNRPA1-211ENST00000560433 NOS1P29475 1434 aa15.11■□□□□ 0.01
SNRPA1-211ENST00000560433 CNTLNQ9NXG0 1405 aa15.11■□□□□ 0.01
SNRPA1-211ENST00000560433 PLPPR3Q6T4P5 718 aa15.11■□□□□ 0.01
SNRPA1-211ENST00000560433 ARHGEF40Q8TER5 1519 aa15.1■□□□□ 0.01
SNRPA1-211ENST00000560433 GPRASP1Q5JY77 1395 aa15.09■□□□□ 0.01
SNRPA1-211ENST00000560433 CLTCQ00610 1675 aaKnown RBP15.09■□□□□ 0.01
SNRPA1-211ENST00000560433 ADGRB3O60242 1522 aa15.08■□□□□ 0
SNRPA1-211ENST00000560433 ZC3H13Q5T200 1668 aaKnown RBP15.08■□□□□ 0
SNRPA1-211ENST00000560433 ESF1Q9H501 851 aaKnown RBP15.07■□□□□ 0
SNRPA1-211ENST00000560433 ARHGAP31Q2M1Z3 1444 aa15.07■□□□□ 0
SNRPA1-211ENST00000560433 TMEM132EQ6IEE7 984 aa15.07■□□□□ 0
SNRPA1-211ENST00000560433 TESK2Q96S53 571 aa15.07■□□□□ 0
SNRPA1-211ENST00000560433 AGLP35573 1532 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms