RNA–Protein interactions for RNA: ENST00000559598.6

CRNDE-207, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 1 (best)

Gene CRNDE, Length 696 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-207ENST00000559598 LSM11P83369 360 aaKnown RBP eCLIP11.76□□□□□ -0.53
CRNDE-207ENST00000559598 ANKRD13DQ6ZTN6 518 aa11.76□□□□□ -0.53
CRNDE-207ENST00000559598 KCNV2Q8TDN2 545 aa11.76□□□□□ -0.53
CRNDE-207ENST00000559598 P3H3Q8IVL6 736 aa11.75□□□□□ -0.53
CRNDE-207ENST00000559598 DPYSL4O14531 572 aa11.74□□□□□ -0.53
CRNDE-207ENST00000559598 ARIH1Q9Y4X5 557 aaPredicted RBP11.74□□□□□ -0.53
CRNDE-207ENST00000559598 WDR62O43379 1518 aa11.73□□□□□ -0.53
CRNDE-207ENST00000559598 MRC2Q9UBG0 1479 aa11.73□□□□□ -0.53
CRNDE-207ENST00000559598 KDM4FA0A1W2PPD8 638 aa11.72□□□□□ -0.53
CRNDE-207ENST00000559598 ARHGEF1Q92888 912 aaKnown RBP11.71□□□□□ -0.53
CRNDE-207ENST00000559598 ARHGAP33O14559 1287 aa11.69□□□□□ -0.54
CRNDE-207ENST00000559598 EVI5O60447 810 aa11.69□□□□□ -0.54
CRNDE-207ENST00000559598 PPP4R3BQ5MIZ7 849 aa11.68□□□□□ -0.54
CRNDE-207ENST00000559598 CADPSQ9ULU8 1353 aa11.67□□□□□ -0.54
CRNDE-207ENST00000559598 PDIA6Q15084 440 aa11.66□□□□□ -0.54
CRNDE-207ENST00000559598 POTEEQ6S8J3 1075 aa11.66□□□□□ -0.54
CRNDE-207ENST00000559598 ANO8Q9HCE9 1232 aaPredicted RBP11.66□□□□□ -0.54
CRNDE-207ENST00000559598 AXIN2Q9Y2T1 843 aa11.66□□□□□ -0.54
CRNDE-207ENST00000559598 SPDYE16A6NNV3 312 aaPredicted RBP11.65□□□□□ -0.54
CRNDE-207ENST00000559598 KCNH8Q96L42 1107 aa11.63□□□□□ -0.55
CRNDE-207ENST00000559598 CEP164Q9UPV0 1460 aa11.63□□□□□ -0.55
CRNDE-207ENST00000559598 MROH2BQ7Z745 1585 aa11.62□□□□□ -0.55
CRNDE-207ENST00000559598 TK2O00142 265 aa11.6□□□□□ -0.55
CRNDE-207ENST00000559598 ADGRD1Q6QNK2 874 aa11.6□□□□□ -0.55
CRNDE-207ENST00000559598 JPH4Q96JJ6 628 aa11.56□□□□□ -0.56
CRNDE-207ENST00000559598 PSEN2P49810 448 aa11.55□□□□□ -0.56
CRNDE-207ENST00000559598 FOSBP53539 338 aa11.55□□□□□ -0.56
CRNDE-207ENST00000559598 ZNF454Q8N9F8 522 aa11.55□□□□□ -0.56
CRNDE-207ENST00000559598 FANCD2Q9BXW9 1451 aa11.55□□□□□ -0.56
CRNDE-207ENST00000559598 PHF14O94880 888 aa11.54□□□□□ -0.56
CRNDE-207ENST00000559598 DDX12PQ92771 950 aa11.54□□□□□ -0.56
CRNDE-207ENST00000559598 RIMBP3CA6NJZ7 1639 aa11.53□□□□□ -0.56
CRNDE-207ENST00000559598 RIMBP3BA6NNM3 1639 aa11.53□□□□□ -0.56
CRNDE-207ENST00000559598 RIMBP3Q9UFD9 1639 aa11.53□□□□□ -0.56
CRNDE-207ENST00000559598 SEMA3EO15041 775 aa11.53□□□□□ -0.56
CRNDE-207ENST00000559598 DMRTA1Q5VZB9 504 aa11.53□□□□□ -0.56
CRNDE-207ENST00000559598 KCNK17Q96T54 332 aa11.52□□□□□ -0.57
CRNDE-207ENST00000559598 PCDHGA10Q9Y5H3 936 aa11.52□□□□□ -0.57
CRNDE-207ENST00000559598 STAC3Q96MF2 364 aa11.51□□□□□ -0.57
CRNDE-207ENST00000559598 BCL2L12Q9HB09 334 aa11.51□□□□□ -0.57
CRNDE-207ENST00000559598 GRXCR2A6NFK2 248 aa11.5□□□□□ -0.57
CRNDE-207ENST00000559598 HRO43593 1189 aa11.5□□□□□ -0.57
CRNDE-207ENST00000559598 MLLT3P42568 568 aaPredicted RBP11.5□□□□□ -0.57
CRNDE-207ENST00000559598 EPAS1Q99814 870 aa11.5□□□□□ -0.57
CRNDE-207ENST00000559598 CFTRP13569 1480 aa11.5□□□□□ -0.57
CRNDE-207ENST00000559598 WIZO95785 1651 aa11.49□□□□□ -0.57
CRNDE-207ENST00000559598 TYW1BQ6NUM6 668 aa11.49□□□□□ -0.57
CRNDE-207ENST00000559598 ZDHHC16Q969W1 377 aa11.49□□□□□ -0.57
CRNDE-207ENST00000559598 HCSTQ9UBK5 93 aa11.49□□□□□ -0.57
CRNDE-207ENST00000559598 PRDM2Q13029 1718 aa11.49□□□□□ -0.57
CRNDE-207ENST00000559598 PTPREP23469 700 aa11.48□□□□□ -0.57
CRNDE-207ENST00000559598 NBR1Q14596 966 aa11.48□□□□□ -0.57
CRNDE-207ENST00000559598 FBXW7Q969H0 707 aa11.48□□□□□ -0.57
CRNDE-207ENST00000559598 TESPA1A2RU30 521 aaPredicted RBP11.47□□□□□ -0.57
CRNDE-207ENST00000559598 ARHGEF11O15085 1522 aa11.46□□□□□ -0.57
CRNDE-207ENST00000559598 SLC4A5Q9BY07 1137 aa11.46□□□□□ -0.57
CRNDE-207ENST00000559598 URB2Q14146 1524 aaKnown RBP11.45□□□□□ -0.58
CRNDE-207ENST00000559598 OSBPP22059 807 aa11.45□□□□□ -0.58
CRNDE-207ENST00000559598 ADAM33Q9BZ11 813 aa11.45□□□□□ -0.58
CRNDE-207ENST00000559598 EN1Q05925 392 aaPredicted RBP11.43□□□□□ -0.58
CRNDE-207ENST00000559598 VPS9D1Q9Y2B5 631 aa11.43□□□□□ -0.58
CRNDE-207ENST00000559598 SMYD5Q6GMV2 418 aa11.42□□□□□ -0.58
CRNDE-207ENST00000559598 RBM33Q96EV2 1170 aaKnown RBP11.42□□□□□ -0.58
CRNDE-207ENST00000559598 IFT140Q96RY7 1462 aa11.41□□□□□ -0.58
CRNDE-207ENST00000559598 PRIM1P49642 420 aaKnown RBP11.41□□□□□ -0.58
CRNDE-207ENST00000559598 MAP3K7O43318 606 aa11.39□□□□□ -0.59
CRNDE-207ENST00000559598 C6orf132Q5T0Z8 1188 aa11.38□□□□□ -0.59
CRNDE-207ENST00000559598 KCTD12Q96CX2 325 aaKnown RBP11.38□□□□□ -0.59
CRNDE-207ENST00000559598 TOP2AP11388 1531 aaKnown RBP11.38□□□□□ -0.59
CRNDE-207ENST00000559598 TSR1Q2NL82 804 aaKnown RBP11.37□□□□□ -0.59
CRNDE-207ENST00000559598 ZBED2Q9BTP6 218 aa11.37□□□□□ -0.59
CRNDE-207ENST00000559598 TULP1O00294 542 aaPredicted RBP11.36□□□□□ -0.59
CRNDE-207ENST00000559598 EIF4G3O43432 1585 aaKnown RBP11.35□□□□□ -0.59
CRNDE-207ENST00000559598 BCANQ96GW7 911 aa11.34□□□□□ -0.59
CRNDE-207ENST00000559598 NBPF3Q9H094 633 aa11.34□□□□□ -0.59
CRNDE-207ENST00000559598 PLA2G2EQ9NZK7 142 aa11.34□□□□□ -0.59
CRNDE-207ENST00000559598 ZNF608Q9ULD9 1512 aaPredicted RBP11.34□□□□□ -0.59
CRNDE-207ENST00000559598 CHD1O14646 1710 aa11.33□□□□□ -0.6
CRNDE-207ENST00000559598 PPP1R3GB7ZBB8 358 aa11.33□□□□□ -0.6
CRNDE-207ENST00000559598 BHMG1C9JSJ3 638 aaPredicted RBP11.33□□□□□ -0.6
CRNDE-207ENST00000559598 COL9A1P20849 921 aa11.33□□□□□ -0.6
CRNDE-207ENST00000559598 RBM26Q5T8P6 1007 aaKnown RBP11.33□□□□□ -0.6
CRNDE-207ENST00000559598 RSF1Q96T23 1441 aaPredicted RBP11.33□□□□□ -0.6
CRNDE-207ENST00000559598 GOLGA8CPA6NN73 597 aa11.32□□□□□ -0.6
CRNDE-207ENST00000559598 MRPL50Q8N5N7 158 aaKnown RBP11.32□□□□□ -0.6
CRNDE-207ENST00000559598 CDHR5Q9HBB8 845 aa11.32□□□□□ -0.6
CRNDE-207ENST00000559598 ABCC8Q09428 1581 aa11.32□□□□□ -0.6
CRNDE-207ENST00000559598 ARAP1Q96P48 1450 aa11.31□□□□□ -0.6
CRNDE-207ENST00000559598 TOPBP1Q92547 1522 aa11.3□□□□□ -0.6
CRNDE-207ENST00000559598 CYB5RLQ6IPT4 315 aa11.29□□□□□ -0.6
CRNDE-207ENST00000559598 NUTM2FA1L443 756 aa11.28□□□□□ -0.6
CRNDE-207ENST00000559598 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.28□□□□□ -0.6
CRNDE-207ENST00000559598 CERKQ8TCT0 537 aa11.28□□□□□ -0.6
CRNDE-207ENST00000559598 NPDC1Q9NQX5 325 aaPredicted RBP11.27□□□□□ -0.61
CRNDE-207ENST00000559598 RABGEF1Q9UJ41 708 aa11.27□□□□□ -0.61
CRNDE-207ENST00000559598 DNMBPQ6XZF7 1577 aa11.27□□□□□ -0.61
CRNDE-207ENST00000559598 WNT2BQ93097 391 aa11.26□□□□□ -0.61
CRNDE-207ENST00000559598 PTPN5P54829 565 aa11.25□□□□□ -0.61
CRNDE-207ENST00000559598 PTGDRQ13258 359 aa11.25□□□□□ -0.61
CRNDE-207ENST00000559598 THSD4Q6ZMP0 1018 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms