RNA–Protein interactions for RNA: ENST00000559496.5

ZEB1-216, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-216ENST00000559496 PTPREP23469 700 aa12.43□□□□□ -0.42
ZEB1-216ENST00000559496 PLCB2Q00722 1185 aa12.43□□□□□ -0.42
ZEB1-216ENST00000559496 SLC4A5Q9BY07 1137 aa12.43□□□□□ -0.42
ZEB1-216ENST00000559496 ARIH1Q9Y4X5 557 aaPredicted RBP12.43□□□□□ -0.42
ZEB1-216ENST00000559496 PHF14O94880 888 aa12.42□□□□□ -0.42
ZEB1-216ENST00000559496 VPS9D1Q9Y2B5 631 aa12.41□□□□□ -0.42
ZEB1-216ENST00000559496 SPDYE16A6NNV3 312 aaPredicted RBP12.4□□□□□ -0.42
ZEB1-216ENST00000559496 PDIA6Q15084 440 aa12.39□□□□□ -0.43
ZEB1-216ENST00000559496 TYW1BQ6NUM6 668 aa12.39□□□□□ -0.43
ZEB1-216ENST00000559496 ZBED2Q9BTP6 218 aa12.39□□□□□ -0.43
ZEB1-216ENST00000559496 FBXW7Q969H0 707 aa12.38□□□□□ -0.43
ZEB1-216ENST00000559496 EPAS1Q99814 870 aa12.37□□□□□ -0.43
ZEB1-216ENST00000559496 BHMG1C9JSJ3 638 aaPredicted RBP12.34□□□□□ -0.43
ZEB1-216ENST00000559496 PPP1R3GB7ZBB8 358 aa12.33□□□□□ -0.44
ZEB1-216ENST00000559496 DDX12PQ92771 950 aa12.33□□□□□ -0.44
ZEB1-216ENST00000559496 BICRAQ9NZM4 1560 aa12.33□□□□□ -0.44
ZEB1-216ENST00000559496 COL9A1P20849 921 aa12.3□□□□□ -0.44
ZEB1-216ENST00000559496 STAC3Q96MF2 364 aa12.29□□□□□ -0.44
ZEB1-216ENST00000559496 C6orf132Q5T0Z8 1188 aa12.28□□□□□ -0.44
ZEB1-216ENST00000559496 ARHGEF1Q92888 912 aaKnown RBP12.28□□□□□ -0.44
ZEB1-216ENST00000559496 HCSTQ9UBK5 93 aa12.27□□□□□ -0.45
ZEB1-216ENST00000559496 EN1Q05925 392 aaPredicted RBP12.25□□□□□ -0.45
ZEB1-216ENST00000559496 NBR1Q14596 966 aa12.25□□□□□ -0.45
ZEB1-216ENST00000559496 RBM33Q96EV2 1170 aaKnown RBP12.25□□□□□ -0.45
ZEB1-216ENST00000559496 PROX2Q3B8N5 592 aa12.24□□□□□ -0.45
ZEB1-216ENST00000559496 KCNV2Q8TDN2 545 aa12.24□□□□□ -0.45
ZEB1-216ENST00000559496 KCTD12Q96CX2 325 aaKnown RBP12.24□□□□□ -0.45
ZEB1-216ENST00000559496 GRXCR2A6NFK2 248 aa12.23□□□□□ -0.45
ZEB1-216ENST00000559496 RABGEF1Q9UJ41 708 aa12.23□□□□□ -0.45
ZEB1-216ENST00000559496 HAP1P54257 671 aaPredicted RBP12.22□□□□□ -0.45
ZEB1-216ENST00000559496 NBPF3Q9H094 633 aa12.22□□□□□ -0.45
ZEB1-216ENST00000559496 P3H3Q8IVL6 736 aa12.21□□□□□ -0.45
ZEB1-216ENST00000559496 MRPL50Q8N5N7 158 aaKnown RBP12.21□□□□□ -0.45
ZEB1-216ENST00000559496 MAP3K7O43318 606 aa12.2□□□□□ -0.46
ZEB1-216ENST00000559496 ONECUT3O60422 494 aaPredicted RBP12.2□□□□□ -0.46
ZEB1-216ENST00000559496 PRIM1P49642 420 aaKnown RBP12.18□□□□□ -0.46
ZEB1-216ENST00000559496 TSR1Q2NL82 804 aaKnown RBP12.18□□□□□ -0.46
ZEB1-216ENST00000559496 CECR2Q9BXF3 1484 aa12.18□□□□□ -0.46
ZEB1-216ENST00000559496 SUPT5HO00267 1087 aaKnown RBP12.18□□□□□ -0.46
ZEB1-216ENST00000559496 OSBPP22059 807 aa12.18□□□□□ -0.46
ZEB1-216ENST00000559496 THSD4Q6ZMP0 1018 aa12.17□□□□□ -0.46
ZEB1-216ENST00000559496 TRIM6-TRIM34B2RNG4 842 aa12.16□□□□□ -0.46
ZEB1-216ENST00000559496 LAPTM4BQ86VI4 370 aa12.15□□□□□ -0.46
ZEB1-216ENST00000559496 KIAA1468Q9P260 1216 aa12.15□□□□□ -0.46
ZEB1-216ENST00000559496 GOLGA8CPA6NN73 597 aa12.14□□□□□ -0.47
ZEB1-216ENST00000559496 WNT2BQ93097 391 aa12.14□□□□□ -0.47
ZEB1-216ENST00000559496 BAZ1AQ9NRL2 1556 aaPredicted RBP12.12□□□□□ -0.47
ZEB1-216ENST00000559496 CERKQ8TCT0 537 aa12.12□□□□□ -0.47
ZEB1-216ENST00000559496 RSF1Q96T23 1441 aaPredicted RBP12.11□□□□□ -0.47
ZEB1-216ENST00000559496 MLLT3P42568 568 aaPredicted RBP12.1□□□□□ -0.47
ZEB1-216ENST00000559496 PTPN5P54829 565 aa12.1□□□□□ -0.47
ZEB1-216ENST00000559496 TSKSQ9UJT2 592 aa12.1□□□□□ -0.47
ZEB1-216ENST00000559496 MROH2BQ7Z745 1585 aa12.1□□□□□ -0.47
ZEB1-216ENST00000559496 PLA2G2EQ9NZK7 142 aa12.09□□□□□ -0.47
ZEB1-216ENST00000559496 KDM2AQ9Y2K7 1162 aa12.09□□□□□ -0.47
ZEB1-216ENST00000559496 SMARCA4P51532 1647 aa12.08□□□□□ -0.48
ZEB1-216ENST00000559496 PACS2Q86VP3 889 aa12.07□□□□□ -0.48
ZEB1-216ENST00000559496 CDHR5Q9HBB8 845 aa12.07□□□□□ -0.48
ZEB1-216ENST00000559496 SEPT9Q9UHD8 586 aaPredicted RBP12.07□□□□□ -0.48
ZEB1-216ENST00000559496 PRSS12P56730 875 aa12.06□□□□□ -0.48
ZEB1-216ENST00000559496 VSIG10Q8N0Z9 540 aa12.06□□□□□ -0.48
ZEB1-216ENST00000559496 ANKK1Q8NFD2 765 aa12.06□□□□□ -0.48
ZEB1-216ENST00000559496 CDCA7LQ96GN5 454 aa12.06□□□□□ -0.48
ZEB1-216ENST00000559496 ZFRQ96KR1 1074 aaKnown RBP12.06□□□□□ -0.48
ZEB1-216ENST00000559496 FAM98CQ17RN3 349 aaKnown RBP12.05□□□□□ -0.48
ZEB1-216ENST00000559496 FAM198AQ9UFP1 575 aa12.05□□□□□ -0.48
ZEB1-216ENST00000559496 SOWAHBA6NEL2 793 aa12.04□□□□□ -0.48
ZEB1-216ENST00000559496 SEMA3EO15041 775 aa12.04□□□□□ -0.48
ZEB1-216ENST00000559496 RBM27Q9P2N5 1060 aaKnown RBP12.04□□□□□ -0.48
ZEB1-216ENST00000559496 NPDC1Q9NQX5 325 aaPredicted RBP12.02□□□□□ -0.49
ZEB1-216ENST00000559496 BCAMP50895 628 aa12.01□□□□□ -0.49
ZEB1-216ENST00000559496 WIZO95785 1651 aa12□□□□□ -0.49
ZEB1-216ENST00000559496 C3orf80F5H4A9 247 aa11.99□□□□□ -0.49
ZEB1-216ENST00000559496 TTC13Q8NBP0 860 aa11.98□□□□□ -0.49
ZEB1-216ENST00000559496 EIF4G1Q04637 1599 aaKnown RBP11.97□□□□□ -0.49
ZEB1-216ENST00000559496 IFFO2Q5TF58 517 aa11.97□□□□□ -0.49
ZEB1-216ENST00000559496 TESPA1A2RU30 521 aaPredicted RBP11.96□□□□□ -0.49
ZEB1-216ENST00000559496 NBPF26B4DH59 902 aa11.95□□□□□ -0.5
ZEB1-216ENST00000559496 SMYD5Q6GMV2 418 aa11.95□□□□□ -0.5
ZEB1-216ENST00000559496 TATDN2Q93075 761 aa11.95□□□□□ -0.5
ZEB1-216ENST00000559496 SMAPO00193 183 aa11.94□□□□□ -0.5
ZEB1-216ENST00000559496 NYAP1Q6ZVC0 841 aa11.94□□□□□ -0.5
ZEB1-216ENST00000559496 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.94□□□□□ -0.5
ZEB1-216ENST00000559496 PNMA3Q9UL41 463 aa11.94□□□□□ -0.5
ZEB1-216ENST00000559496 PTGDRQ13258 359 aa11.93□□□□□ -0.5
ZEB1-216ENST00000559496 LRCH3Q96II8 777 aa11.93□□□□□ -0.5
ZEB1-216ENST00000559496 PEG3Q9GZU2 1588 aa11.93□□□□□ -0.5
ZEB1-216ENST00000559496 NUTM2FA1L443 756 aa11.92□□□□□ -0.5
ZEB1-216ENST00000559496 PADI6Q6TGC4 694 aa11.92□□□□□ -0.5
ZEB1-216ENST00000559496 WBP1LQ9NX94 342 aa11.92□□□□□ -0.5
ZEB1-216ENST00000559496 NUDT18Q6ZVK8 323 aa11.92□□□□□ -0.5
ZEB1-216ENST00000559496 TSR3Q9UJK0 312 aaKnown RBP11.92□□□□□ -0.5
ZEB1-216ENST00000559496 SMARCA2P51531 1590 aa11.91□□□□□ -0.5
ZEB1-216ENST00000559496 ATAD2BQ9ULI0 1458 aa11.9□□□□□ -0.5
ZEB1-216ENST00000559496 ITGBL1O95965 494 aaPredicted RBP11.9□□□□□ -0.5
ZEB1-216ENST00000559496 TOP2AP11388 1531 aaKnown RBP11.89□□□□□ -0.51
ZEB1-216ENST00000559496 SAMD7Q7Z3H4 446 aa11.89□□□□□ -0.51
ZEB1-216ENST00000559496 HPS5Q9UPZ3 1129 aa11.89□□□□□ -0.51
ZEB1-216ENST00000559496 FCHSD2O94868 740 aa11.87□□□□□ -0.51
ZEB1-216ENST00000559496 HDGFP51858 240 aaKnown RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms