RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 MAGI2Q86UL8 1455 aa29.47■■■□□ 2.31
SNRPA1-205ENST00000558036 TEX14Q8IWB6 1497 aa29.46■■■□□ 2.31
SNRPA1-205ENST00000558036 RICTORQ6R327 1708 aa29.46■■■□□ 2.31
SNRPA1-205ENST00000558036 A2MP01023 1474 aa29.43■■■□□ 2.3
SNRPA1-205ENST00000558036 FRMPD1Q5SYB0 1578 aa29.43■■■□□ 2.3
SNRPA1-205ENST00000558036 IQGAP3Q86VI3 1631 aa29.43■■■□□ 2.3
SNRPA1-205ENST00000558036 PPP1R15AO75807 674 aaPredicted RBP29.42■■■□□ 2.3
SNRPA1-205ENST00000558036 ABCA6Q8N139 1617 aa29.42■■■□□ 2.3
SNRPA1-205ENST00000558036 RPRD2Q5VT52 1461 aaKnown RBP29.42■■■□□ 2.3
SNRPA1-205ENST00000558036 DNAJC5Q9H3Z4 198 aa29.41■■■□□ 2.3
SNRPA1-205ENST00000558036 YEATS2Q9ULM3 1422 aa29.39■■■□□ 2.29
SNRPA1-205ENST00000558036 DEPDC5O75140 1603 aa29.37■■■□□ 2.29
SNRPA1-205ENST00000558036 ZNF316A6NFI3 1004 aaPredicted RBP29.36■■■□□ 2.29
SNRPA1-205ENST00000558036 L3MBTL2Q969R5 705 aa29.36■■■□□ 2.29
SNRPA1-205ENST00000558036 EIF2AK4Q9P2K8 1649 aaKnown RBP29.36■■■□□ 2.29
SNRPA1-205ENST00000558036 DIP2CQ9Y2E4 1556 aa29.35■■■□□ 2.29
SNRPA1-205ENST00000558036 COL17A1Q9UMD9 1497 aaPredicted RBP29.33■■■□□ 2.29
SNRPA1-205ENST00000558036 MROH1Q8NDA8 1641 aa29.32■■■□□ 2.28
SNRPA1-205ENST00000558036 KANK1Q14678 1352 aa29.3■■■□□ 2.28
SNRPA1-205ENST00000558036 PRDM15P57071 1507 aaPredicted RBP29.29■■■□□ 2.28
SNRPA1-205ENST00000558036 ZMYM4Q5VZL5 1548 aa29.29■■■□□ 2.28
SNRPA1-205ENST00000558036 PLA2R1Q13018 1463 aa29.29■■■□□ 2.28
SNRPA1-205ENST00000558036 GGT6Q6P531 493 aa29.28■■■□□ 2.28
SNRPA1-205ENST00000558036 TRHP20396 242 aaPredicted RBP29.27■■■□□ 2.28
SNRPA1-205ENST00000558036 VWDEQ8N2E2 1590 aa29.26■■■□□ 2.28
SNRPA1-205ENST00000558036 RNF17Q9BXT8 1623 aaKnown RBP29.23■■■□□ 2.27
SNRPA1-205ENST00000558036 E9PCH4 1651 aa29.22■■■□□ 2.27
SNRPA1-205ENST00000558036 CCDC144AA2RUR9 1427 aa29.22■■■□□ 2.27
SNRPA1-205ENST00000558036 TET3O43151 1660 aa29.19■■■□□ 2.26
SNRPA1-205ENST00000558036 BCORL1Q5H9F3 1711 aa29.16■■■□□ 2.26
SNRPA1-205ENST00000558036 ATP10AO60312 1499 aa29.16■■■□□ 2.26
SNRPA1-205ENST00000558036 NBPF8Q3BBV2 869 aa29.15■■■□□ 2.26
SNRPA1-205ENST00000558036 WASHC2CQ9Y4E1 1318 aa29.13■■■□□ 2.25
SNRPA1-205ENST00000558036 CEP152O94986 1710 aa29.13■■■□□ 2.25
SNRPA1-205ENST00000558036 EFCAB6Q5THR3 1501 aa29.12■■■□□ 2.25
SNRPA1-205ENST00000558036 RGL3Q3MIN7 710 aa29.11■■■□□ 2.25
SNRPA1-205ENST00000558036 HIRIP3Q9BW71 556 aaPredicted RBP29.11■■■□□ 2.25
SNRPA1-205ENST00000558036 LMTK2Q8IWU2 1503 aa29.11■■■□□ 2.25
SNRPA1-205ENST00000558036 ZNF326Q5BKZ1 582 aaKnown RBP29.1■■■□□ 2.25
SNRPA1-205ENST00000558036 PTPRTO14522 1441 aa29.09■■■□□ 2.25
SNRPA1-205ENST00000558036 ABCC3O15438 1527 aa29.08■■■□□ 2.25
SNRPA1-205ENST00000558036 TRPM2O94759 1503 aa29.07■■■□□ 2.24
SNRPA1-205ENST00000558036 DIEXFQ68CQ4 756 aaKnown RBP29.07■■■□□ 2.24
SNRPA1-205ENST00000558036 KDM2AQ9Y2K7 1162 aa29.07■■■□□ 2.24
SNRPA1-205ENST00000558036 DCAF11Q8TEB1 546 aa29.06■■■□□ 2.24
SNRPA1-205ENST00000558036 SPHKAPQ2M3C7 1700 aa29.06■■■□□ 2.24
SNRPA1-205ENST00000558036 ARHGEF40Q8TER5 1519 aa29.04■■■□□ 2.24
SNRPA1-205ENST00000558036 NPATQ14207 1427 aa29.04■■■□□ 2.24
SNRPA1-205ENST00000558036 SIGLEC1Q9BZZ2 1709 aa29.03■■■□□ 2.24
SNRPA1-205ENST00000558036 REREQ9P2R6 1566 aa29.02■■■□□ 2.24
SNRPA1-205ENST00000558036 UGGT1Q9NYU2 1555 aa29.01■■■□□ 2.23
SNRPA1-205ENST00000558036 CLTCL1P53675 1640 aa29■■■□□ 2.23
SNRPA1-205ENST00000558036 MLECQ14165 292 aa28.99■■■□□ 2.23
SNRPA1-205ENST00000558036 CAMSAP1Q5T5Y3 1602 aa28.97■■■□□ 2.23
SNRPA1-205ENST00000558036 AGLP35573 1532 aa28.97■■■□□ 2.23
SNRPA1-205ENST00000558036 SPATA31E1Q6ZUB1 1445 aa28.97■■■□□ 2.23
SNRPA1-205ENST00000558036 UHRF1BP1Q6BDS2 1440 aa28.94■■■□□ 2.22
SNRPA1-205ENST00000558036 CFAP65Q6ZU64 1925 aaKnown RBP28.91■■■□□ 2.22
SNRPA1-205ENST00000558036 ZC3H13Q5T200 1668 aaKnown RBP28.91■■■□□ 2.22
SNRPA1-205ENST00000558036 HSPA5P11021 654 aaKnown RBP28.9■■■□□ 2.22
SNRPA1-205ENST00000558036 ARID4BQ4LE39 1312 aaPredicted RBP28.88■■■□□ 2.21
SNRPA1-205ENST00000558036 EIF4G2P78344 907 aaKnown RBP eCLIP28.88■■■□□ 2.21
SNRPA1-205ENST00000558036 ARHGAP31Q2M1Z3 1444 aa28.87■■■□□ 2.21
SNRPA1-205ENST00000558036 PRAG1Q86YV5 1406 aa28.86■■■□□ 2.21
SNRPA1-205ENST00000558036 CNTLNQ9NXG0 1405 aa28.86■■■□□ 2.21
SNRPA1-205ENST00000558036 NOS1P29475 1434 aa28.84■■■□□ 2.21
SNRPA1-205ENST00000558036 RALGAPBQ86X10 1494 aa28.83■■■□□ 2.21
SNRPA1-205ENST00000558036 CHGAP10645 457 aaKnown RBP28.83■■■□□ 2.21
SNRPA1-205ENST00000558036 FBXO31Q5XUX0 539 aaPredicted RBP28.82■■■□□ 2.2
SNRPA1-205ENST00000558036 SYNMO15061 1565 aa28.81■■■□□ 2.2
SNRPA1-205ENST00000558036 PPP6R1Q9UPN7 881 aa28.81■■■□□ 2.2
SNRPA1-205ENST00000558036 CLTCQ00610 1675 aaKnown RBP28.8■■■□□ 2.2
SNRPA1-205ENST00000558036 CARD11Q9BXL7 1154 aa28.78■■■□□ 2.2
SNRPA1-205ENST00000558036 ROCK2O75116 1388 aaKnown RBP28.77■■■□□ 2.2
SNRPA1-205ENST00000558036 MROH2AA6NES4 1674 aa28.77■■■□□ 2.2
SNRPA1-205ENST00000558036 NBPF1Q3BBV0 1214 aa28.76■■■□□ 2.2
SNRPA1-205ENST00000558036 KIF1BO60333 1816 aa28.76■■■□□ 2.19
SNRPA1-205ENST00000558036 USP47Q96K76 1375 aa28.75■■■□□ 2.19
SNRPA1-205ENST00000558036 ADGRB3O60242 1522 aa28.74■■■□□ 2.19
SNRPA1-205ENST00000558036 IDI1Q13907 227 aa28.74■■■□□ 2.19
SNRPA1-205ENST00000558036 ESF1Q9H501 851 aaKnown RBP28.74■■■□□ 2.19
SNRPA1-205ENST00000558036 PREX1Q8TCU6 1659 aa28.74■■■□□ 2.19
SNRPA1-205ENST00000558036 TRPM1Q7Z4N2 1603 aa28.74■■■□□ 2.19
SNRPA1-205ENST00000558036 NEURL4Q96JN8 1562 aa28.73■■■□□ 2.19
SNRPA1-205ENST00000558036 DDX10Q13206 875 aaKnown RBP28.73■■■□□ 2.19
SNRPA1-205ENST00000558036 PIK3C2BO00750 1634 aa28.71■■■□□ 2.19
SNRPA1-205ENST00000558036 ERVK-7P63135 1459 aa28.71■■■□□ 2.19
SNRPA1-205ENST00000558036 MADDQ8WXG6 1647 aa28.69■■■□□ 2.18
SNRPA1-205ENST00000558036 C11orf95C9JLR9 678 aaPredicted RBP28.68■■■□□ 2.18
SNRPA1-205ENST00000558036 SLC52A1Q9NWF4 448 aa28.68■■■□□ 2.18
SNRPA1-205ENST00000558036 MIER1Q8N108 512 aa28.67■■■□□ 2.18
SNRPA1-205ENST00000558036 ADGRF5Q8IZF2 1346 aa28.67■■■□□ 2.18
SNRPA1-205ENST00000558036 ZMYM3Q14202 1370 aa28.67■■■□□ 2.18
SNRPA1-205ENST00000558036 WASHC2AQ641Q2 1341 aa28.67■■■□□ 2.18
SNRPA1-205ENST00000558036 STAC3Q96MF2 364 aa28.64■■■□□ 2.18
SNRPA1-205ENST00000558036 GPRASP1Q5JY77 1395 aa28.63■■■□□ 2.17
SNRPA1-205ENST00000558036 NUTM2DQ5VT03 806 aaPredicted RBP28.62■■■□□ 2.17
SNRPA1-205ENST00000558036 MYOM2P54296 1465 aa28.62■■■□□ 2.17
SNRPA1-205ENST00000558036 ST20-MTHFSA0A0A6YYL1 179 aa28.61■■■□□ 2.17
SNRPA1-205ENST00000558036 IFT172Q9UG01 1749 aa28.61■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms