RNA–Protein interactions for RNA: ENST00000557380.5

NEMF-215, Transcript of nuclear export mediator factor, humanhuman

TSL 1 (best)

Gene NEMF, Length 1,742 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEMF-215ENST00000557380 KIF15Q9NS87 1388 aa12.27□□□□□ -0.45
NEMF-215ENST00000557380 SYCP2Q9BX26 1530 aa12.27□□□□□ -0.45
NEMF-215ENST00000557380 WDR7Q9Y4E6 1490 aa12.25□□□□□ -0.45
NEMF-215ENST00000557380 PLXNC1O60486 1568 aa12.25□□□□□ -0.45
NEMF-215ENST00000557380 EFCAB2Q5VUJ9 269 aa12.25□□□□□ -0.45
NEMF-215ENST00000557380 REM2Q8IYK8 340 aaPredicted RBP12.25□□□□□ -0.45
NEMF-215ENST00000557380 ABCC1P33527 1531 aa12.24□□□□□ -0.45
NEMF-215ENST00000557380 MIER1Q8N108 512 aa12.23□□□□□ -0.45
NEMF-215ENST00000557380 KCNH8Q96L42 1107 aa12.23□□□□□ -0.45
NEMF-215ENST00000557380 ABCA9Q8IUA7 1624 aa12.23□□□□□ -0.45
NEMF-215ENST00000557380 ARHGEF12Q9NZN5 1544 aa12.22□□□□□ -0.45
NEMF-215ENST00000557380 TEX14Q8IWB6 1497 aa12.22□□□□□ -0.45
NEMF-215ENST00000557380 UNC13BO14795 1591 aa12.2□□□□□ -0.46
NEMF-215ENST00000557380 NUP155O75694 1391 aa12.2□□□□□ -0.46
NEMF-215ENST00000557380 DUOX2Q9NRD8 1548 aa12.19□□□□□ -0.46
NEMF-215ENST00000557380 RTEL1-TNFRSF6BF6WH68 1400 aa12.19□□□□□ -0.46
NEMF-215ENST00000557380 L3MBTL2Q969R5 705 aa12.19□□□□□ -0.46
NEMF-215ENST00000557380 ASXL2Q76L83 1435 aa12.18□□□□□ -0.46
NEMF-215ENST00000557380 ERBINQ96RT1 1412 aa12.18□□□□□ -0.46
NEMF-215ENST00000557380 PKD2Q13563 968 aa12.18□□□□□ -0.46
NEMF-215ENST00000557380 ZNF692Q9BU19 519 aaPredicted RBP12.18□□□□□ -0.46
NEMF-215ENST00000557380 MAGI2Q86UL8 1455 aa12.16□□□□□ -0.46
NEMF-215ENST00000557380 FAM135AQ9P2D6 1515 aa12.16□□□□□ -0.46
NEMF-215ENST00000557380 CENPBP07199 599 aaPredicted RBP12.16□□□□□ -0.46
NEMF-215ENST00000557380 TRAPPC8Q9Y2L5 1435 aa12.16□□□□□ -0.46
NEMF-215ENST00000557380 IQGAP3Q86VI3 1631 aa12.15□□□□□ -0.46
NEMF-215ENST00000557380 FANCAO15360 1455 aa12.15□□□□□ -0.47
NEMF-215ENST00000557380 NPM1P06748 294 aaKnown RBP eCLIP12.14□□□□□ -0.47
NEMF-215ENST00000557380 ZFYVE16Q7Z3T8 1539 aa12.13□□□□□ -0.47
NEMF-215ENST00000557380 PITPNM1O00562 1244 aa12.13□□□□□ -0.47
NEMF-215ENST00000557380 SPAG9O60271 1321 aaKnown RBP12.11□□□□□ -0.47
NEMF-215ENST00000557380 INO80Q9ULG1 1556 aaPredicted RBP12.11□□□□□ -0.47
NEMF-215ENST00000557380 UHRF1BP1Q6BDS2 1440 aa12.11□□□□□ -0.47
NEMF-215ENST00000557380 EIF4G2P78344 907 aaKnown RBP eCLIP12.11□□□□□ -0.47
NEMF-215ENST00000557380 CFAP74Q9C0B2 1584 aa12.1□□□□□ -0.47
NEMF-215ENST00000557380 ATP10AO60312 1499 aa12.1□□□□□ -0.47
NEMF-215ENST00000557380 ADGRL1O94910 1474 aa12.09□□□□□ -0.47
NEMF-215ENST00000557380 NBPF8Q3BBV2 869 aa12.09□□□□□ -0.47
NEMF-215ENST00000557380 SSUH2Q9Y2M2 353 aa12.09□□□□□ -0.47
NEMF-215ENST00000557380 ATP7AQ04656 1500 aa12.09□□□□□ -0.47
NEMF-215ENST00000557380 HSPA5P11021 654 aaKnown RBP12.08□□□□□ -0.47
NEMF-215ENST00000557380 DDX10Q13206 875 aaKnown RBP12.08□□□□□ -0.47
NEMF-215ENST00000557380 SPATA31E1Q6ZUB1 1445 aa12.08□□□□□ -0.48
NEMF-215ENST00000557380 SCAPERQ9BY12 1400 aa12.08□□□□□ -0.48
NEMF-215ENST00000557380 DEPDC5O75140 1603 aa12.07□□□□□ -0.48
NEMF-215ENST00000557380 EIF2AK4Q9P2K8 1649 aaKnown RBP12.07□□□□□ -0.48
NEMF-215ENST00000557380 AFAP1Q8N556 730 aa12.06□□□□□ -0.48
NEMF-215ENST00000557380 SP7Q8TDD2 431 aaPredicted RBP12.06□□□□□ -0.48
NEMF-215ENST00000557380 PLA2R1Q13018 1463 aa12.06□□□□□ -0.48
NEMF-215ENST00000557380 HIRIP3Q9BW71 556 aaPredicted RBP12.06□□□□□ -0.48
NEMF-215ENST00000557380 ZNF518AQ6AHZ1 1483 aa12.05□□□□□ -0.48
NEMF-215ENST00000557380 RALGAPBQ86X10 1494 aa12.05□□□□□ -0.48
NEMF-215ENST00000557380 CCDC144AA2RUR9 1427 aa12.05□□□□□ -0.48
NEMF-215ENST00000557380 CD109Q6YHK3 1445 aa12.05□□□□□ -0.48
NEMF-215ENST00000557380 VWDEQ8N2E2 1590 aa12.04□□□□□ -0.48
NEMF-215ENST00000557380 POLR1AO95602 1720 aaPredicted RBP12.04□□□□□ -0.48
NEMF-215ENST00000557380 DHX29Q7Z478 1369 aaKnown RBP12.04□□□□□ -0.48
NEMF-215ENST00000557380 SPDYE1Q8NFV5 336 aaPredicted RBP12.03□□□□□ -0.48
NEMF-215ENST00000557380 CLEC11AQ9Y240 323 aa12.03□□□□□ -0.48
NEMF-215ENST00000557380 KDM5CP41229 1560 aa12.03□□□□□ -0.48
NEMF-215ENST00000557380 NEO1Q92859 1461 aa12.02□□□□□ -0.48
NEMF-215ENST00000557380 KIDINS220Q9ULH0 1771 aa12.02□□□□□ -0.49
NEMF-215ENST00000557380 WASHC2AQ641Q2 1341 aa12.02□□□□□ -0.49
NEMF-215ENST00000557380 CCER2I3L3R5 266 aa12.02□□□□□ -0.49
NEMF-215ENST00000557380 MLH3Q9UHC1 1453 aa12.01□□□□□ -0.49
NEMF-215ENST00000557380 PIP4P2Q8N4L2 257 aa12.01□□□□□ -0.49
NEMF-215ENST00000557380 POGZQ7Z3K3 1410 aa12.01□□□□□ -0.49
NEMF-215ENST00000557380 PRDM15P57071 1507 aaPredicted RBP12.01□□□□□ -0.49
NEMF-215ENST00000557380 TET3O43151 1660 aa12.01□□□□□ -0.49
NEMF-215ENST00000557380 ANP32CO43423 234 aa12□□□□□ -0.49
NEMF-215ENST00000557380 GLI2P10070 1586 aa12□□□□□ -0.49
NEMF-215ENST00000557380 CCDC7Q96M83 1385 aa12□□□□□ -0.49
NEMF-215ENST00000557380 PTPRTO14522 1441 aa12□□□□□ -0.49
NEMF-215ENST00000557380 E9PCH4 1651 aa12□□□□□ -0.49
NEMF-215ENST00000557380 KANK1Q14678 1352 aa11.99□□□□□ -0.49
NEMF-215ENST00000557380 YTHDC1Q96MU7 727 aaKnown RBP11.99□□□□□ -0.49
NEMF-215ENST00000557380 TRPM2O94759 1503 aa11.99□□□□□ -0.49
NEMF-215ENST00000557380 RIMBP3CA6NJZ7 1639 aa11.99□□□□□ -0.49
NEMF-215ENST00000557380 RIMBP3BA6NNM3 1639 aa11.99□□□□□ -0.49
NEMF-215ENST00000557380 RIMBP3Q9UFD9 1639 aa11.99□□□□□ -0.49
NEMF-215ENST00000557380 ARID4BQ4LE39 1312 aaPredicted RBP11.98□□□□□ -0.49
NEMF-215ENST00000557380 MROH1Q8NDA8 1641 aa11.98□□□□□ -0.49
NEMF-215ENST00000557380 BCORL1Q5H9F3 1711 aa11.98□□□□□ -0.49
NEMF-215ENST00000557380 USP47Q96K76 1375 aa11.98□□□□□ -0.49
NEMF-215ENST00000557380 PRAG1Q86YV5 1406 aa11.98□□□□□ -0.49
NEMF-215ENST00000557380 MAP3K4Q9Y6R4 1608 aa11.98□□□□□ -0.49
NEMF-215ENST00000557380 NEURL4Q96JN8 1562 aa11.97□□□□□ -0.49
NEMF-215ENST00000557380 HECW2Q9P2P5 1572 aa11.97□□□□□ -0.49
NEMF-215ENST00000557380 CNTLNQ9NXG0 1405 aa11.97□□□□□ -0.49
NEMF-215ENST00000557380 LMTK2Q8IWU2 1503 aa11.97□□□□□ -0.49
NEMF-215ENST00000557380 RNF17Q9BXT8 1623 aaKnown RBP11.97□□□□□ -0.49
NEMF-215ENST00000557380 A2MP01023 1474 aa11.97□□□□□ -0.49
NEMF-215ENST00000557380 DCAF11Q8TEB1 546 aa11.97□□□□□ -0.49
NEMF-215ENST00000557380 SPHKAPQ2M3C7 1700 aa11.96□□□□□ -0.49
NEMF-215ENST00000557380 LAMC1P11047 1609 aa11.96□□□□□ -0.49
NEMF-215ENST00000557380 STAC3Q96MF2 364 aa11.96□□□□□ -0.49
NEMF-215ENST00000557380 TRPM1Q7Z4N2 1603 aa11.96□□□□□ -0.5
NEMF-215ENST00000557380 GPRASP1Q5JY77 1395 aa11.95□□□□□ -0.5
NEMF-215ENST00000557380 C11orf95C9JLR9 678 aaPredicted RBP11.95□□□□□ -0.5
NEMF-215ENST00000557380 KIF3BO15066 747 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms