RNA–Protein interactions for RNA: ENST00000556309.5

SUPT16H-206, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 3

Gene SUPT16H, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-206ENST00000556309 LAPTM4BQ86VI4 370 aa9.3□□□□□ -0.92
SUPT16H-206ENST00000556309 RABGEF1Q9UJ41 708 aa9.3□□□□□ -0.92
SUPT16H-206ENST00000556309 PPP1R3GB7ZBB8 358 aa9.29□□□□□ -0.92
SUPT16H-206ENST00000556309 ONECUT3O60422 494 aaPredicted RBP9.28□□□□□ -0.92
SUPT16H-206ENST00000556309 EVI5O60447 810 aa9.28□□□□□ -0.92
SUPT16H-206ENST00000556309 LAPTM4AQ15012 233 aa9.28□□□□□ -0.92
SUPT16H-206ENST00000556309 SLC24A1O60721 1099 aa9.27□□□□□ -0.93
SUPT16H-206ENST00000556309 FBXW7Q969H0 707 aa9.27□□□□□ -0.93
SUPT16H-206ENST00000556309 MAP3K9P80192 1104 aa9.24□□□□□ -0.93
SUPT16H-206ENST00000556309 ADAM33Q9BZ11 813 aa9.24□□□□□ -0.93
SUPT16H-206ENST00000556309 DDX27Q96GQ7 796 aaKnown RBP9.22□□□□□ -0.93
SUPT16H-206ENST00000556309 KDM2AQ9Y2K7 1162 aa9.22□□□□□ -0.93
SUPT16H-206ENST00000556309 SOWAHBA6NEL2 793 aa9.21□□□□□ -0.94
SUPT16H-206ENST00000556309 NCKAP5LQ9HCH0 1330 aa9.21□□□□□ -0.94
SUPT16H-206ENST00000556309 KCNC4Q03721 635 aa9.2□□□□□ -0.94
SUPT16H-206ENST00000556309 TYW1BQ6NUM6 668 aa9.2□□□□□ -0.94
SUPT16H-206ENST00000556309 PHF14O94880 888 aa9.19□□□□□ -0.94
SUPT16H-206ENST00000556309 Q6ZNB5 142 aa9.19□□□□□ -0.94
SUPT16H-206ENST00000556309 MFSD10Q14728 455 aa9.18□□□□□ -0.94
SUPT16H-206ENST00000556309 LARP6Q9BRS8 491 aaKnown RBP9.18□□□□□ -0.94
SUPT16H-206ENST00000556309 VSIG10Q8N0Z9 540 aa9.17□□□□□ -0.94
SUPT16H-206ENST00000556309 EPAS1Q99814 870 aa9.16□□□□□ -0.94
SUPT16H-206ENST00000556309 PCDHGA10Q9Y5H3 936 aa9.15□□□□□ -0.94
SUPT16H-206ENST00000556309 ZFRQ96KR1 1074 aaKnown RBP9.14□□□□□ -0.95
SUPT16H-206ENST00000556309 FAM98CQ17RN3 349 aaKnown RBP9.12□□□□□ -0.95
SUPT16H-206ENST00000556309 WDR70Q9NW82 654 aa9.12□□□□□ -0.95
SUPT16H-206ENST00000556309 TSR3Q9UJK0 312 aaKnown RBP9.12□□□□□ -0.95
SUPT16H-206ENST00000556309 BCAMP50895 628 aa9.11□□□□□ -0.95
SUPT16H-206ENST00000556309 KIAA1468Q9P260 1216 aa9.11□□□□□ -0.95
SUPT16H-206ENST00000556309 PROX2Q3B8N5 592 aa9.1□□□□□ -0.95
SUPT16H-206ENST00000556309 LRCH3Q96II8 777 aa9.09□□□□□ -0.95
SUPT16H-206ENST00000556309 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.09□□□□□ -0.95
SUPT16H-206ENST00000556309 TRIM6-TRIM34B2RNG4 842 aa9.08□□□□□ -0.96
SUPT16H-206ENST00000556309 COL9A1P20849 921 aa9.08□□□□□ -0.96
SUPT16H-206ENST00000556309 WBP1LQ9NX94 342 aa9.07□□□□□ -0.96
SUPT16H-206ENST00000556309 C6orf132Q5T0Z8 1188 aa9.06□□□□□ -0.96
SUPT16H-206ENST00000556309 PACS2Q86VP3 889 aa9.05□□□□□ -0.96
SUPT16H-206ENST00000556309 EMILIN3Q9NT22 766 aa9.05□□□□□ -0.96
SUPT16H-206ENST00000556309 TRAF7Q6Q0C0 670 aa9.04□□□□□ -0.96
SUPT16H-206ENST00000556309 E2F4Q16254 413 aa9.03□□□□□ -0.96
SUPT16H-206ENST00000556309 HPS5Q9UPZ3 1129 aa9.03□□□□□ -0.96
SUPT16H-206ENST00000556309 NRG2O14511 850 aaPredicted RBP9.02□□□□□ -0.97
SUPT16H-206ENST00000556309 NECTIN2Q92692 538 aa9.02□□□□□ -0.97
SUPT16H-206ENST00000556309 V9GY48 417 aaPredicted RBP9.02□□□□□ -0.97
SUPT16H-206ENST00000556309 GFRA3O60609 400 aa9.01□□□□□ -0.97
SUPT16H-206ENST00000556309 PPP4CP60510 307 aa9.01□□□□□ -0.97
SUPT16H-206ENST00000556309 CAMK2BQ13554 666 aa9.01□□□□□ -0.97
SUPT16H-206ENST00000556309 KCNV2Q8TDN2 545 aa9.01□□□□□ -0.97
SUPT16H-206ENST00000556309 CERKQ8TCT0 537 aa9□□□□□ -0.97
SUPT16H-206ENST00000556309 SEPT9Q9UHD8 586 aaPredicted RBP9□□□□□ -0.97
SUPT16H-206ENST00000556309 DPYSL4O14531 572 aa8.96□□□□□ -0.98
SUPT16H-206ENST00000556309 IL21Q9HBE4 155 aa8.96□□□□□ -0.98
SUPT16H-206ENST00000556309 HDGFP51858 240 aaKnown RBP8.95□□□□□ -0.98
SUPT16H-206ENST00000556309 GGCXP38435 758 aa8.94□□□□□ -0.98
SUPT16H-206ENST00000556309 EN1Q05925 392 aaPredicted RBP8.94□□□□□ -0.98
SUPT16H-206ENST00000556309 P3H3Q8IVL6 736 aa8.94□□□□□ -0.98
SUPT16H-206ENST00000556309 PRKD2Q9BZL6 878 aa8.94□□□□□ -0.98
SUPT16H-206ENST00000556309 SPDYE16A6NNV3 312 aaPredicted RBP8.93□□□□□ -0.98
SUPT16H-206ENST00000556309 TJAP1Q5JTD0 557 aa8.93□□□□□ -0.98
SUPT16H-206ENST00000556309 ARHGEF1Q92888 912 aaKnown RBP8.92□□□□□ -0.98
SUPT16H-206ENST00000556309 NBPF26B4DH59 902 aa8.91□□□□□ -0.98
SUPT16H-206ENST00000556309 MAP3K7O43318 606 aa8.9□□□□□ -0.98
SUPT16H-206ENST00000556309 RBM33Q96EV2 1170 aaKnown RBP8.9□□□□□ -0.98
SUPT16H-206ENST00000556309 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.9□□□□□ -0.98
SUPT16H-206ENST00000556309 TMUB1Q9BVT8 246 aa8.89□□□□□ -0.99
SUPT16H-206ENST00000556309 RBM27Q9P2N5 1060 aaKnown RBP8.89□□□□□ -0.99
SUPT16H-206ENST00000556309 SLC4A3P48751 1232 aa8.88□□□□□ -0.99
SUPT16H-206ENST00000556309 PRSS12P56730 875 aa8.88□□□□□ -0.99
SUPT16H-206ENST00000556309 NBR1Q14596 966 aa8.88□□□□□ -0.99
SUPT16H-206ENST00000556309 PDIA6Q15084 440 aa8.88□□□□□ -0.99
SUPT16H-206ENST00000556309 PPP1R18Q6NYC8 613 aa8.88□□□□□ -0.99
SUPT16H-206ENST00000556309 MTRQ99707 1265 aa8.88□□□□□ -0.99
SUPT16H-206ENST00000556309 TSKSQ9UJT2 592 aa8.88□□□□□ -0.99
SUPT16H-206ENST00000556309 DDX12PQ92771 950 aa8.87□□□□□ -0.99
SUPT16H-206ENST00000556309 CDCA7LQ96GN5 454 aa8.87□□□□□ -0.99
SUPT16H-206ENST00000556309 ZNF787Q6DD87 383 aa8.86□□□□□ -0.99
SUPT16H-206ENST00000556309 SAMD7Q7Z3H4 446 aa8.86□□□□□ -0.99
SUPT16H-206ENST00000556309 ARIH1Q9Y4X5 557 aaPredicted RBP8.86□□□□□ -0.99
SUPT16H-206ENST00000556309 LCE2BO14633 110 aa8.85□□□□□ -0.99
SUPT16H-206ENST00000556309 SEMA3EO15041 775 aa8.85□□□□□ -0.99
SUPT16H-206ENST00000556309 PRR14Q9BWN1 585 aa8.85□□□□□ -0.99
SUPT16H-206ENST00000556309 PDZRN3Q9UPQ7 1066 aa8.85□□□□□ -0.99
SUPT16H-206ENST00000556309 TATDN2Q93075 761 aa8.83□□□□□ -1
SUPT16H-206ENST00000556309 MLLT3P42568 568 aaPredicted RBP8.82□□□□□ -1
SUPT16H-206ENST00000556309 SLF2Q8IX21 1173 aa8.82□□□□□ -1
SUPT16H-206ENST00000556309 TSR1Q2NL82 804 aaKnown RBP8.81□□□□□ -1
SUPT16H-206ENST00000556309 PNMA3Q9UL41 463 aa8.81□□□□□ -1
SUPT16H-206ENST00000556309 GRXCR2A6NFK2 248 aa8.8□□□□□ -1
SUPT16H-206ENST00000556309 BCANQ96GW7 911 aa8.8□□□□□ -1
SUPT16H-206ENST00000556309 TESPA1A2RU30 521 aaPredicted RBP8.76□□□□□ -1.01
SUPT16H-206ENST00000556309 RNF40O75150 1001 aa8.75□□□□□ -1.01
SUPT16H-206ENST00000556309 DGAT1O75907 488 aa8.75□□□□□ -1.01
SUPT16H-206ENST00000556309 SMAPO00193 183 aa8.74□□□□□ -1.01
SUPT16H-206ENST00000556309 APLP1P51693 650 aa8.74□□□□□ -1.01
SUPT16H-206ENST00000556309 PRIM1P49642 420 aaKnown RBP8.73□□□□□ -1.01
SUPT16H-206ENST00000556309 PRR20EP86478 221 aa8.73□□□□□ -1.01
SUPT16H-206ENST00000556309 PRR20CP86479 221 aa8.73□□□□□ -1.01
SUPT16H-206ENST00000556309 PRR20DP86480 221 aa8.73□□□□□ -1.01
SUPT16H-206ENST00000556309 PRR20BP86481 221 aa8.73□□□□□ -1.01
SUPT16H-206ENST00000556309 PRR20AP86496 221 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 134.2 ms