RNA–Protein interactions for RNA: ENST00000556113.1

CNIH1-205, Transcript of cornichon family AMPA receptor auxiliary protein 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CNIH1, Length 523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH1-205ENST00000556113 ZNF316A6NFI3 1004 aaPredicted RBP11.67□□□□□ -0.54
CNIH1-205ENST00000556113 MAGI1Q96QZ7 1491 aaPredicted RBP11.66□□□□□ -0.54
CNIH1-205ENST00000556113 FAM205CA6NFA0 338 aa11.66□□□□□ -0.54
CNIH1-205ENST00000556113 CDAN1Q8IWY9 1227 aa11.66□□□□□ -0.54
CNIH1-205ENST00000556113 HS3ST6Q96QI5 342 aa11.66□□□□□ -0.54
CNIH1-205ENST00000556113 ERICH3Q5RHP9 1530 aa11.65□□□□□ -0.54
CNIH1-205ENST00000556113 AQRO60306 1485 aaKnown RBP eCLIP11.65□□□□□ -0.54
CNIH1-205ENST00000556113 GRIN2BQ13224 1484 aa11.65□□□□□ -0.54
CNIH1-205ENST00000556113 GAPVD1Q14C86 1478 aa11.65□□□□□ -0.54
CNIH1-205ENST00000556113 OXER1Q8TDS5 423 aa11.65□□□□□ -0.54
CNIH1-205ENST00000556113 CHD1O14646 1710 aa11.65□□□□□ -0.54
CNIH1-205ENST00000556113 CADPS2Q86UW7 1296 aa11.64□□□□□ -0.55
CNIH1-205ENST00000556113 TDRD9Q8NDG6 1382 aaKnown RBP11.63□□□□□ -0.55
CNIH1-205ENST00000556113 ADAMTS12P58397 1594 aa11.62□□□□□ -0.55
CNIH1-205ENST00000556113 NUDT7P0C024 238 aa11.61□□□□□ -0.55
CNIH1-205ENST00000556113 VARS2Q5ST30 1063 aaKnown RBP11.61□□□□□ -0.55
CNIH1-205ENST00000556113 CUL7Q14999 1698 aa11.6□□□□□ -0.55
CNIH1-205ENST00000556113 SNAPC4Q5SXM2 1469 aa11.6□□□□□ -0.55
CNIH1-205ENST00000556113 WDR70Q9NW82 654 aa11.6□□□□□ -0.55
CNIH1-205ENST00000556113 CAMK2BQ13554 666 aa11.59□□□□□ -0.55
CNIH1-205ENST00000556113 SYNJ2O15056 1496 aa11.58□□□□□ -0.56
CNIH1-205ENST00000556113 KDM4FA0A1W2PPD8 638 aa11.58□□□□□ -0.56
CNIH1-205ENST00000556113 ZNF687Q8N1G0 1237 aa11.58□□□□□ -0.56
CNIH1-205ENST00000556113 KIF27Q86VH2 1401 aa11.58□□□□□ -0.56
CNIH1-205ENST00000556113 PBX2P40425 430 aa11.57□□□□□ -0.56
CNIH1-205ENST00000556113 PLCB2Q00722 1185 aa11.57□□□□□ -0.56
CNIH1-205ENST00000556113 KHSRPQ92945 711 aaKnown RBP eCLIP11.56□□□□□ -0.562e-7■■■■□ 20.9
CNIH1-205ENST00000556113 MAP3K9P80192 1104 aa11.55□□□□□ -0.56
CNIH1-205ENST00000556113 UPF1Q92900 1129 aaKnown RBP eCLIP11.55□□□□□ -0.56
CNIH1-205ENST00000556113 LHX6Q9UPM6 363 aa11.55□□□□□ -0.56
CNIH1-205ENST00000556113 FHAD1B1AJZ9 1412 aa11.53□□□□□ -0.56
CNIH1-205ENST00000556113 GRIN2AQ12879 1464 aa11.52□□□□□ -0.56
CNIH1-205ENST00000556113 CLASP1Q7Z460 1538 aa11.52□□□□□ -0.57
CNIH1-205ENST00000556113 POTEB3A0JP26 581 aa11.52□□□□□ -0.57
CNIH1-205ENST00000556113 PPP4R3BQ5MIZ7 849 aa11.52□□□□□ -0.57
CNIH1-205ENST00000556113 POTEBQ6S5H4 581 aa11.52□□□□□ -0.57
CNIH1-205ENST00000556113 ANO8Q9HCE9 1232 aaPredicted RBP11.52□□□□□ -0.57
CNIH1-205ENST00000556113 E2F4Q16254 413 aa11.51□□□□□ -0.57
CNIH1-205ENST00000556113 EMILIN3Q9NT22 766 aa11.5□□□□□ -0.57
CNIH1-205ENST00000556113 ARIH1Q9Y4X5 557 aaPredicted RBP11.5□□□□□ -0.57
CNIH1-205ENST00000556113 EVI5O60447 810 aa11.49□□□□□ -0.57
CNIH1-205ENST00000556113 KCNH8Q96L42 1107 aa11.49□□□□□ -0.57
CNIH1-205ENST00000556113 IGF1RP08069 1367 aa11.49□□□□□ -0.57
CNIH1-205ENST00000556113 NUP160Q12769 1436 aa11.48□□□□□ -0.57
CNIH1-205ENST00000556113 EEA1Q15075 1411 aa11.48□□□□□ -0.57
CNIH1-205ENST00000556113 CEP170Q5SW79 1584 aa11.47□□□□□ -0.57
CNIH1-205ENST00000556113 SHROOM2Q13796 1616 aa11.46□□□□□ -0.57
CNIH1-205ENST00000556113 SPDYE16A6NNV3 312 aaPredicted RBP11.46□□□□□ -0.57
CNIH1-205ENST00000556113 JPH4Q96JJ6 628 aa11.46□□□□□ -0.57
CNIH1-205ENST00000556113 KRTAP3-3Q9BYR6 98 aa11.46□□□□□ -0.57
CNIH1-205ENST00000556113 KRTAP3-2Q9BYR7 98 aa11.46□□□□□ -0.57
CNIH1-205ENST00000556113 TSHZ2Q9NRE2 1034 aa11.46□□□□□ -0.57
CNIH1-205ENST00000556113 RUSC2Q8N2Y8 1516 aa11.45□□□□□ -0.58
CNIH1-205ENST00000556113 PTGER2P43116 358 aa11.45□□□□□ -0.58
CNIH1-205ENST00000556113 CHMP7Q8WUX9 453 aaPredicted RBP11.43□□□□□ -0.58
CNIH1-205ENST00000556113 ARHGAP33O14559 1287 aa11.42□□□□□ -0.58
CNIH1-205ENST00000556113 FOSBP53539 338 aa11.42□□□□□ -0.58
CNIH1-205ENST00000556113 P3H3Q8IVL6 736 aa11.42□□□□□ -0.58
CNIH1-205ENST00000556113 PRXQ9BXM0 1461 aa11.42□□□□□ -0.58
CNIH1-205ENST00000556113 CTTNBP2Q8WZ74 1663 aa11.42□□□□□ -0.58
CNIH1-205ENST00000556113 CARMIL1Q5VZK9 1371 aa11.41□□□□□ -0.58
CNIH1-205ENST00000556113 RAPGEF2Q9Y4G8 1499 aa11.41□□□□□ -0.58
CNIH1-205ENST00000556113 DPYSL4O14531 572 aa11.41□□□□□ -0.58
CNIH1-205ENST00000556113 PDIA6Q15084 440 aa11.41□□□□□ -0.58
CNIH1-205ENST00000556113 ZNF454Q8N9F8 522 aa11.41□□□□□ -0.58
CNIH1-205ENST00000556113 FBXW7Q969H0 707 aa11.41□□□□□ -0.58
CNIH1-205ENST00000556113 RIMBP3CA6NJZ7 1639 aa11.39□□□□□ -0.59
CNIH1-205ENST00000556113 RIMBP3BA6NNM3 1639 aa11.39□□□□□ -0.59
CNIH1-205ENST00000556113 KIF21BO75037 1637 aa11.39□□□□□ -0.59
CNIH1-205ENST00000556113 RIMBP3Q9UFD9 1639 aa11.39□□□□□ -0.59
CNIH1-205ENST00000556113 PHF14O94880 888 aa11.39□□□□□ -0.59
CNIH1-205ENST00000556113 LSM11P83369 360 aaKnown RBP eCLIP11.39□□□□□ -0.59
CNIH1-205ENST00000556113 BCL2L12Q9HB09 334 aa11.39□□□□□ -0.59
CNIH1-205ENST00000556113 ZDHHC16Q969W1 377 aa11.38□□□□□ -0.59
CNIH1-205ENST00000556113 EPAS1Q99814 870 aa11.38□□□□□ -0.59
CNIH1-205ENST00000556113 PLSCR2Q9NRY7 297 aa11.38□□□□□ -0.59
CNIH1-205ENST00000556113 ARHGEF11O15085 1522 aa11.38□□□□□ -0.59
CNIH1-205ENST00000556113 KIAA0586Q9BVV6 1533 aa11.37□□□□□ -0.59
CNIH1-205ENST00000556113 ARHGEF1Q92888 912 aaKnown RBP11.37□□□□□ -0.59
CNIH1-205ENST00000556113 TK2O00142 265 aa11.36□□□□□ -0.59
CNIH1-205ENST00000556113 TYW1BQ6NUM6 668 aa11.36□□□□□ -0.59
CNIH1-205ENST00000556113 SPNS2Q8IVW8 549 aa11.36□□□□□ -0.59
CNIH1-205ENST00000556113 IQGAP2Q13576 1575 aa11.36□□□□□ -0.59
CNIH1-205ENST00000556113 PTPREP23469 700 aa11.34□□□□□ -0.59
CNIH1-205ENST00000556113 HAP1P54257 671 aaPredicted RBP11.32□□□□□ -0.6
CNIH1-205ENST00000556113 UGGT2Q9NYU1 1516 aa11.31□□□□□ -0.6
CNIH1-205ENST00000556113 SLC4A5Q9BY07 1137 aa11.31□□□□□ -0.6
CNIH1-205ENST00000556113 PCDHGA10Q9Y5H3 936 aa11.31□□□□□ -0.6
CNIH1-205ENST00000556113 ANKRD13DQ6ZTN6 518 aa11.3□□□□□ -0.6
CNIH1-205ENST00000556113 KCNK17Q96T54 332 aa11.3□□□□□ -0.6
CNIH1-205ENST00000556113 POTEEQ6S8J3 1075 aa11.29□□□□□ -0.6
CNIH1-205ENST00000556113 ARAP1Q96P48 1450 aa11.29□□□□□ -0.6
CNIH1-205ENST00000556113 MMRN1Q13201 1228 aa11.28□□□□□ -0.6
CNIH1-205ENST00000556113 AXIN2Q9Y2T1 843 aa11.28□□□□□ -0.6
CNIH1-205ENST00000556113 ERCC6L2Q5T890 1561 aa11.28□□□□□ -0.6
CNIH1-205ENST00000556113 VSIG10Q8N0Z9 540 aa11.27□□□□□ -0.61
CNIH1-205ENST00000556113 PPP1R3GB7ZBB8 358 aa11.26□□□□□ -0.61
CNIH1-205ENST00000556113 ADGRD1Q6QNK2 874 aa11.26□□□□□ -0.61
CNIH1-205ENST00000556113 KCNV2Q8TDN2 545 aa11.26□□□□□ -0.61
CNIH1-205ENST00000556113 ADAM33Q9BZ11 813 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms