RNA–Protein interactions for RNA: ENST00000555737.5

RCCD1-204, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 3,157 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-204ENST00000555737 DNMT1P26358 1616 aaKnown RBP23.37■■□□□ 1.33
RCCD1-204ENST00000555737 CCDC146Q8IYE0 955 aa23.36■■□□□ 1.33
RCCD1-204ENST00000555737 ADAMTS8Q9UP79 889 aa23.36■■□□□ 1.33
RCCD1-204ENST00000555737 BRPF3Q9ULD4 1205 aa23.36■■□□□ 1.33
RCCD1-204ENST00000555737 LRPPRCP42704 1394 aaKnown RBP23.34■■□□□ 1.33
RCCD1-204ENST00000555737 GPATCH8Q9UKJ3 1502 aaKnown RBP23.33■■□□□ 1.33
RCCD1-204ENST00000555737 TROQ12816 1431 aaPredicted RBP23.33■■□□□ 1.33
RCCD1-204ENST00000555737 ARID4BQ4LE39 1312 aaPredicted RBP23.32■■□□□ 1.32
RCCD1-204ENST00000555737 WDR43Q15061 677 aaKnown RBP eCLIP23.32■■□□□ 1.32
RCCD1-204ENST00000555737 KIF21AQ7Z4S6 1674 aa23.31■■□□□ 1.32
RCCD1-204ENST00000555737 JPH4Q96JJ6 628 aa23.31■■□□□ 1.32
RCCD1-204ENST00000555737 ARXQ96QS3 562 aa23.3■■□□□ 1.32
RCCD1-204ENST00000555737 KDM5CP41229 1560 aa23.29■■□□□ 1.32
RCCD1-204ENST00000555737 DISP1Q96F81 1524 aa23.29■■□□□ 1.32
RCCD1-204ENST00000555737 PPM1GO15355 546 aaPredicted RBP23.28■■□□□ 1.32
RCCD1-204ENST00000555737 MBD5Q9P267 1494 aa23.28■■□□□ 1.32
RCCD1-204ENST00000555737 C9orf84Q5VXU9 1444 aa23.27■■□□□ 1.32
RCCD1-204ENST00000555737 PDE3BQ13370 1112 aa23.27■■□□□ 1.32
RCCD1-204ENST00000555737 PER1O15534 1290 aaPredicted RBP23.27■■□□□ 1.32
RCCD1-204ENST00000555737 DISP3Q9P2K9 1392 aa23.27■■□□□ 1.31
RCCD1-204ENST00000555737 TARBP1Q13395 1621 aaKnown RBP23.26■■□□□ 1.31
RCCD1-204ENST00000555737 KIAA0586Q9BVV6 1533 aa23.26■■□□□ 1.31
RCCD1-204ENST00000555737 NFKBIBQ15653 356 aa23.26■■□□□ 1.31
RCCD1-204ENST00000555737 KIF14Q15058 1648 aa23.25■■□□□ 1.31
RCCD1-204ENST00000555737 EIF5BO60841 1220 aaKnown RBP23.25■■□□□ 1.31
RCCD1-204ENST00000555737 RALGAPBQ86X10 1494 aa23.24■■□□□ 1.31
RCCD1-204ENST00000555737 KNSTRNQ9Y448 316 aa23.24■■□□□ 1.31
RCCD1-204ENST00000555737 MS4A1P11836 297 aa23.24■■□□□ 1.31
RCCD1-204ENST00000555737 NEUROD2Q15784 382 aa23.23■■□□□ 1.31
RCCD1-204ENST00000555737 TMF1P82094 1093 aa23.22■■□□□ 1.31
RCCD1-204ENST00000555737 CCDC144AA2RUR9 1427 aa23.22■■□□□ 1.31
RCCD1-204ENST00000555737 ADAMTS12P58397 1594 aa23.22■■□□□ 1.31
RCCD1-204ENST00000555737 DDRGK1Q96HY6 314 aa23.21■■□□□ 1.31
RCCD1-204ENST00000555737 RAPGEF6Q8TEU7 1601 aa23.2■■□□□ 1.3
RCCD1-204ENST00000555737 FRAT1Q92837 279 aaPredicted RBP23.2■■□□□ 1.3
RCCD1-204ENST00000555737 PBRM1Q86U86 1689 aa23.19■■□□□ 1.3
RCCD1-204ENST00000555737 KIAA0556O60303 1618 aa23.19■■□□□ 1.3
RCCD1-204ENST00000555737 PARD3Q8TEW0 1356 aa23.19■■□□□ 1.3
RCCD1-204ENST00000555737 TNNT2P45379 298 aaPredicted RBP23.18■■□□□ 1.3
RCCD1-204ENST00000555737 FRAT2O75474 233 aaPredicted RBP23.17■■□□□ 1.3
RCCD1-204ENST00000555737 GSE1Q14687 1217 aa23.17■■□□□ 1.3
RCCD1-204ENST00000555737 CANXP27824 592 aaKnown RBP23.17■■□□□ 1.3
RCCD1-204ENST00000555737 SENP3Q9H4L4 574 aaPredicted RBP23.17■■□□□ 1.3
RCCD1-204ENST00000555737 BCAR3O75815 825 aa23.17■■□□□ 1.3
RCCD1-204ENST00000555737 TESK2Q96S53 571 aa23.16■■□□□ 1.3
RCCD1-204ENST00000555737 APAF1O14727 1248 aa23.14■■□□□ 1.3
RCCD1-204ENST00000555737 GOLGA2Q08379 1002 aa23.14■■□□□ 1.29
RCCD1-204ENST00000555737 UHRF1BP1Q6BDS2 1440 aa23.14■■□□□ 1.29
RCCD1-204ENST00000555737 POLR1AO95602 1720 aaPredicted RBP23.13■■□□□ 1.29
RCCD1-204ENST00000555737 USP35Q9P2H5 1018 aa23.13■■□□□ 1.29
RCCD1-204ENST00000555737 SLKQ9H2G2 1235 aaPredicted RBP23.12■■□□□ 1.29
RCCD1-204ENST00000555737 PPP2R1AP30153 589 aa23.12■■□□□ 1.29
RCCD1-204ENST00000555737 SPINK5Q9NQ38 1064 aaPredicted RBP23.12■■□□□ 1.29
RCCD1-204ENST00000555737 PLEKHH1Q9ULM0 1364 aa23.12■■□□□ 1.29
RCCD1-204ENST00000555737 FAM161AQ3B820 660 aa23.11■■□□□ 1.29
RCCD1-204ENST00000555737 SPRYD3Q8NCJ5 442 aa23.11■■□□□ 1.29
RCCD1-204ENST00000555737 GRIN2AQ12879 1464 aa23.1■■□□□ 1.29
RCCD1-204ENST00000555737 DUSP27Q5VZP5 1158 aa23.1■■□□□ 1.29
RCCD1-204ENST00000555737 CENPQQ7L2Z9 268 aaPredicted RBP23.09■■□□□ 1.29
RCCD1-204ENST00000555737 CARMIL2Q6F5E8 1435 aa23.07■■□□□ 1.28
RCCD1-204ENST00000555737 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.07■■□□□ 1.28
RCCD1-204ENST00000555737 RRP7AQ9Y3A4 280 aaKnown RBP23.07■■□□□ 1.28
RCCD1-204ENST00000555737 PRAG1Q86YV5 1406 aa23.07■■□□□ 1.28
RCCD1-204ENST00000555737 C8orf34Q49A92 452 aa23.07■■□□□ 1.28
RCCD1-204ENST00000555737 BCL2L13Q9BXK5 485 aa23.06■■□□□ 1.28
RCCD1-204ENST00000555737 MRC2Q9UBG0 1479 aa23.06■■□□□ 1.28
RCCD1-204ENST00000555737 ERBINQ96RT1 1412 aa23.06■■□□□ 1.28
RCCD1-204ENST00000555737 COG6Q9Y2V7 657 aa23.05■■□□□ 1.28
RCCD1-204ENST00000555737 ADGRL2O95490 1459 aa23.04■■□□□ 1.28
RCCD1-204ENST00000555737 PANK1Q8TE04 598 aa23.04■■□□□ 1.28
RCCD1-204ENST00000555737 DMRT2Q9Y5R5 561 aa23.03■■□□□ 1.28
RCCD1-204ENST00000555737 MAGI1Q96QZ7 1491 aaPredicted RBP23.01■■□□□ 1.27
RCCD1-204ENST00000555737 CLUAP1Q96AJ1 413 aa23.01■■□□□ 1.27
RCCD1-204ENST00000555737 KDM2BQ8NHM5 1336 aa23.01■■□□□ 1.27
RCCD1-204ENST00000555737 IGHDP01880 384 aa23.01■■□□□ 1.27
RCCD1-204ENST00000555737 ATP10BO94823 1461 aa23■■□□□ 1.27
RCCD1-204ENST00000555737 SEC24BO95487 1268 aa22.99■■□□□ 1.27
RCCD1-204ENST00000555737 ADGBQ8N7X0 1667 aa22.97■■□□□ 1.27
RCCD1-204ENST00000555737 FAM135AQ9P2D6 1515 aa22.97■■□□□ 1.27
RCCD1-204ENST00000555737 CHGAP10645 457 aaKnown RBP22.97■■□□□ 1.27
RCCD1-204ENST00000555737 IFT140Q96RY7 1462 aa22.97■■□□□ 1.27
RCCD1-204ENST00000555737 WASHC2CQ9Y4E1 1318 aa22.97■■□□□ 1.27
RCCD1-204ENST00000555737 A2MP01023 1474 aa22.96■■□□□ 1.27
RCCD1-204ENST00000555737 ARHGEF12Q9NZN5 1544 aa22.96■■□□□ 1.27
RCCD1-204ENST00000555737 ITSN2Q9NZM3 1697 aa22.96■■□□□ 1.27
RCCD1-204ENST00000555737 ERCC6Q03468 1493 aa22.95■■□□□ 1.26
RCCD1-204ENST00000555737 SLFN5Q08AF3 891 aa22.95■■□□□ 1.26
RCCD1-204ENST00000555737 PLEKHH2Q8IVE3 1493 aa22.94■■□□□ 1.26
RCCD1-204ENST00000555737 AMER1Q5JTC6 1135 aaPredicted RBP22.93■■□□□ 1.26
RCCD1-204ENST00000555737 TNNQ9UQP3 1299 aa22.93■■□□□ 1.26
RCCD1-204ENST00000555737 POGKQ9P215 609 aa22.93■■□□□ 1.26
RCCD1-204ENST00000555737 COL17A1Q9UMD9 1497 aaPredicted RBP22.92■■□□□ 1.26
RCCD1-204ENST00000555737 BLMP54132 1417 aaPredicted RBP22.92■■□□□ 1.26
RCCD1-204ENST00000555737 PLA2R1Q13018 1463 aa22.91■■□□□ 1.26
RCCD1-204ENST00000555737 GZF1Q9H116 711 aaPredicted RBP22.91■■□□□ 1.26
RCCD1-204ENST00000555737 PTPRGP23470 1445 aa22.9■■□□□ 1.26
RCCD1-204ENST00000555737 KDM5DQ9BY66 1539 aa22.89■■□□□ 1.26
RCCD1-204ENST00000555737 MAGI2Q86UL8 1455 aa22.89■■□□□ 1.26
RCCD1-204ENST00000555737 CEP170Q5SW79 1584 aa22.88■■□□□ 1.25
RCCD1-204ENST00000555737 CFAP70Q5T0N1 1121 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms