RNA–Protein interactions for RNA: ENST00000555682.1

SEC23A-211, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 2

Gene SEC23A, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-211ENST00000555682 VPS9D1Q9Y2B5 631 aa13.3□□□□□ -0.28
SEC23A-211ENST00000555682 STAC3Q96MF2 364 aa13.28□□□□□ -0.28
SEC23A-211ENST00000555682 PPP1R3GB7ZBB8 358 aa13.27□□□□□ -0.29
SEC23A-211ENST00000555682 ZBED2Q9BTP6 218 aa13.27□□□□□ -0.29
SEC23A-211ENST00000555682 NBR1Q14596 966 aa13.24□□□□□ -0.29
SEC23A-211ENST00000555682 C6orf132Q5T0Z8 1188 aa13.23□□□□□ -0.29
SEC23A-211ENST00000555682 RBM33Q96EV2 1170 aaKnown RBP13.23□□□□□ -0.29
SEC23A-211ENST00000555682 COL9A1P20849 921 aa13.2□□□□□ -0.3
SEC23A-211ENST00000555682 EN1Q05925 392 aaPredicted RBP13.2□□□□□ -0.3
SEC23A-211ENST00000555682 KCNV2Q8TDN2 545 aa13.2□□□□□ -0.3
SEC23A-211ENST00000555682 ARHGEF1Q92888 912 aaKnown RBP13.2□□□□□ -0.3
SEC23A-211ENST00000555682 GRXCR2A6NFK2 248 aa13.19□□□□□ -0.3
SEC23A-211ENST00000555682 MAP3K7O43318 606 aa13.18□□□□□ -0.3
SEC23A-211ENST00000555682 NBPF3Q9H094 633 aa13.18□□□□□ -0.3
SEC23A-211ENST00000555682 BHMG1C9JSJ3 638 aaPredicted RBP13.17□□□□□ -0.3
SEC23A-211ENST00000555682 P3H3Q8IVL6 736 aa13.17□□□□□ -0.3
SEC23A-211ENST00000555682 PROX2Q3B8N5 592 aa13.15□□□□□ -0.3
SEC23A-211ENST00000555682 MRPL50Q8N5N7 158 aaKnown RBP13.15□□□□□ -0.3
SEC23A-211ENST00000555682 RABGEF1Q9UJ41 708 aa13.15□□□□□ -0.3
SEC23A-211ENST00000555682 HAP1P54257 671 aaPredicted RBP13.14□□□□□ -0.31
SEC23A-211ENST00000555682 KCTD12Q96CX2 325 aaKnown RBP13.14□□□□□ -0.31
SEC23A-211ENST00000555682 HCSTQ9UBK5 93 aa13.13□□□□□ -0.31
SEC23A-211ENST00000555682 GOLGA8CPA6NN73 597 aa13.12□□□□□ -0.31
SEC23A-211ENST00000555682 TSR1Q2NL82 804 aaKnown RBP13.12□□□□□ -0.31
SEC23A-211ENST00000555682 ONECUT3O60422 494 aaPredicted RBP13.11□□□□□ -0.31
SEC23A-211ENST00000555682 OSBPP22059 807 aa13.1□□□□□ -0.31
SEC23A-211ENST00000555682 TRIM6-TRIM34B2RNG4 842 aa13.08□□□□□ -0.32
SEC23A-211ENST00000555682 PRIM1P49642 420 aaKnown RBP13.08□□□□□ -0.32
SEC23A-211ENST00000555682 KIAA1468Q9P260 1216 aa13.08□□□□□ -0.32
SEC23A-211ENST00000555682 CERKQ8TCT0 537 aa13.06□□□□□ -0.32
SEC23A-211ENST00000555682 LAPTM4BQ86VI4 370 aa13.05□□□□□ -0.32
SEC23A-211ENST00000555682 WNT2BQ93097 391 aa13.05□□□□□ -0.32
SEC23A-211ENST00000555682 MLLT3P42568 568 aaPredicted RBP13.02□□□□□ -0.33
SEC23A-211ENST00000555682 THSD4Q6ZMP0 1018 aa13.02□□□□□ -0.33
SEC23A-211ENST00000555682 PACS2Q86VP3 889 aa13.01□□□□□ -0.33
SEC23A-211ENST00000555682 CDCA7LQ96GN5 454 aa13.01□□□□□ -0.33
SEC23A-211ENST00000555682 CDHR5Q9HBB8 845 aa13.01□□□□□ -0.33
SEC23A-211ENST00000555682 PTPN5P54829 565 aa13□□□□□ -0.33
SEC23A-211ENST00000555682 PRSS12P56730 875 aa13□□□□□ -0.33
SEC23A-211ENST00000555682 ANKK1Q8NFD2 765 aa13□□□□□ -0.33
SEC23A-211ENST00000555682 SEPT9Q9UHD8 586 aaPredicted RBP13□□□□□ -0.33
SEC23A-211ENST00000555682 TSKSQ9UJT2 592 aa13□□□□□ -0.33
SEC23A-211ENST00000555682 FAM98CQ17RN3 349 aaKnown RBP12.97□□□□□ -0.33
SEC23A-211ENST00000555682 ZFRQ96KR1 1074 aaKnown RBP12.97□□□□□ -0.33
SEC23A-211ENST00000555682 RBM27Q9P2N5 1060 aaKnown RBP12.96□□□□□ -0.33
SEC23A-211ENST00000555682 SEMA3EO15041 775 aa12.95□□□□□ -0.34
SEC23A-211ENST00000555682 KDM2AQ9Y2K7 1162 aa12.95□□□□□ -0.34
SEC23A-211ENST00000555682 NBPF26B4DH59 902 aa12.93□□□□□ -0.34
SEC23A-211ENST00000555682 FAM198AQ9UFP1 575 aa12.93□□□□□ -0.34
SEC23A-211ENST00000555682 VSIG10Q8N0Z9 540 aa12.92□□□□□ -0.34
SEC23A-211ENST00000555682 NPDC1Q9NQX5 325 aaPredicted RBP12.92□□□□□ -0.34
SEC23A-211ENST00000555682 PLA2G2EQ9NZK7 142 aa12.92□□□□□ -0.34
SEC23A-211ENST00000555682 SOWAHBA6NEL2 793 aa12.91□□□□□ -0.34
SEC23A-211ENST00000555682 BCAMP50895 628 aa12.9□□□□□ -0.34
SEC23A-211ENST00000555682 TATDN2Q93075 761 aa12.89□□□□□ -0.35
SEC23A-211ENST00000555682 PNMA3Q9UL41 463 aa12.89□□□□□ -0.35
SEC23A-211ENST00000555682 SMAPO00193 183 aa12.88□□□□□ -0.35
SEC23A-211ENST00000555682 PADI6Q6TGC4 694 aa12.88□□□□□ -0.35
SEC23A-211ENST00000555682 LRCH3Q96II8 777 aa12.88□□□□□ -0.35
SEC23A-211ENST00000555682 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.87□□□□□ -0.35
SEC23A-211ENST00000555682 TESPA1A2RU30 521 aaPredicted RBP12.86□□□□□ -0.35
SEC23A-211ENST00000555682 SMYD5Q6GMV2 418 aa12.86□□□□□ -0.35
SEC23A-211ENST00000555682 TTC13Q8NBP0 860 aa12.86□□□□□ -0.35
SEC23A-211ENST00000555682 NUTM2FA1L443 756 aa12.85□□□□□ -0.35
SEC23A-211ENST00000555682 PTGDRQ13258 359 aa12.85□□□□□ -0.35
SEC23A-211ENST00000555682 NUDT18Q6ZVK8 323 aa12.85□□□□□ -0.35
SEC23A-211ENST00000555682 C3orf80F5H4A9 247 aa12.84□□□□□ -0.35
SEC23A-211ENST00000555682 NYAP1Q6ZVC0 841 aa12.83□□□□□ -0.36
SEC23A-211ENST00000555682 WBP1LQ9NX94 342 aa12.81□□□□□ -0.36
SEC23A-211ENST00000555682 TSR3Q9UJK0 312 aaKnown RBP12.81□□□□□ -0.36
SEC23A-211ENST00000555682 HPS5Q9UPZ3 1129 aa12.81□□□□□ -0.36
SEC23A-211ENST00000555682 FCHSD2O94868 740 aa12.8□□□□□ -0.36
SEC23A-211ENST00000555682 SAMD7Q7Z3H4 446 aa12.8□□□□□ -0.36
SEC23A-211ENST00000555682 HDGFP51858 240 aaKnown RBP12.79□□□□□ -0.36
SEC23A-211ENST00000555682 RBM26Q5T8P6 1007 aaKnown RBP12.76□□□□□ -0.37
SEC23A-211ENST00000555682 PPP4CP60510 307 aa12.75□□□□□ -0.37
SEC23A-211ENST00000555682 IFFO2Q5TF58 517 aa12.74□□□□□ -0.37
SEC23A-211ENST00000555682 EYA1Q99502 592 aa12.73□□□□□ -0.37
SEC23A-211ENST00000555682 RNF40O75150 1001 aa12.72□□□□□ -0.37
SEC23A-211ENST00000555682 HIC1Q14526 733 aa12.71□□□□□ -0.37
SEC23A-211ENST00000555682 RBM46Q8TBY0 533 aaKnown RBP12.71□□□□□ -0.37
SEC23A-211ENST00000555682 ADGRG1Q9Y653 693 aa12.71□□□□□ -0.37
SEC23A-211ENST00000555682 ITGBL1O95965 494 aaPredicted RBP12.7□□□□□ -0.38
SEC23A-211ENST00000555682 SWT1Q5T5J6 900 aaKnown RBP12.7□□□□□ -0.38
SEC23A-211ENST00000555682 SLC4A3P48751 1232 aa12.69□□□□□ -0.38
SEC23A-211ENST00000555682 SLF2Q8IX21 1173 aa12.69□□□□□ -0.38
SEC23A-211ENST00000555682 NECTIN2Q92692 538 aa12.69□□□□□ -0.38
SEC23A-211ENST00000555682 DNAJB2P25686 324 aa12.68□□□□□ -0.38
SEC23A-211ENST00000555682 TULP1O00294 542 aaPredicted RBP12.67□□□□□ -0.38
SEC23A-211ENST00000555682 GNPATO15228 680 aa12.64□□□□□ -0.39
SEC23A-211ENST00000555682 GPR37O15354 613 aa12.64□□□□□ -0.39
SEC23A-211ENST00000555682 KCNC4Q03721 635 aa12.64□□□□□ -0.39
SEC23A-211ENST00000555682 FAM161AQ3B820 660 aa12.64□□□□□ -0.39
SEC23A-211ENST00000555682 GPIHBP1Q8IV16 184 aa12.64□□□□□ -0.39
SEC23A-211ENST00000555682 OATP04181 439 aa12.63□□□□□ -0.39
SEC23A-211ENST00000555682 A0A0G2JS52 829 aa12.62□□□□□ -0.39
SEC23A-211ENST00000555682 RCCD1A6NED2 376 aa12.62□□□□□ -0.39
SEC23A-211ENST00000555682 TMEM134Q9H6X4 195 aa12.62□□□□□ -0.39
SEC23A-211ENST00000555682 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.6□□□□□ -0.39
SEC23A-211ENST00000555682 PXYLP1Q8TE99 480 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms