RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 DISP1Q96F81 1524 aa3.64□□□□□ -1.83
PRPF39-205ENST00000554081 ATF3P18847 181 aa3.64□□□□□ -1.83
PRPF39-205ENST00000554081 POGKQ9P215 609 aa3.64□□□□□ -1.83
PRPF39-205ENST00000554081 POTEB2H3BUK9 544 aa3.63□□□□□ -1.83
PRPF39-205ENST00000554081 PRXQ9BXM0 1461 aa3.63□□□□□ -1.83
PRPF39-205ENST00000554081 EPRSP07814 1512 aaKnown RBP3.63□□□□□ -1.83
PRPF39-205ENST00000554081 ABCA5Q8WWZ7 1642 aa3.63□□□□□ -1.83
PRPF39-205ENST00000554081 KCNA4P22459 653 aa3.63□□□□□ -1.83
PRPF39-205ENST00000554081 NUTM2GQ5VZR2 741 aa3.63□□□□□ -1.83
PRPF39-205ENST00000554081 ZNF579Q8NAF0 562 aaKnown RBP3.63□□□□□ -1.83
PRPF39-205ENST00000554081 DDX17Q92841 729 aaKnown RBP3.63□□□□□ -1.83
PRPF39-205ENST00000554081 CLASP1Q7Z460 1538 aa3.63□□□□□ -1.83
PRPF39-205ENST00000554081 NUP155O75694 1391 aa3.63□□□□□ -1.83
PRPF39-205ENST00000554081 KANK1Q14678 1352 aa3.63□□□□□ -1.83
PRPF39-205ENST00000554081 PKD2Q13563 968 aa3.63□□□□□ -1.83
PRPF39-205ENST00000554081 CCER1Q8TC90 406 aaPredicted RBP3.63□□□□□ -1.83
PRPF39-205ENST00000554081 CCDC18Q5T9S5 1454 aa3.62□□□□□ -1.83
PRPF39-205ENST00000554081 TMEM132EQ6IEE7 984 aa3.62□□□□□ -1.83
PRPF39-205ENST00000554081 ARHGAP35Q9NRY4 1499 aa3.62□□□□□ -1.83
PRPF39-205ENST00000554081 TRAPPC8Q9Y2L5 1435 aa3.62□□□□□ -1.83
PRPF39-205ENST00000554081 IDI1Q13907 227 aa3.62□□□□□ -1.83
PRPF39-205ENST00000554081 CDAN1Q8IWY9 1227 aa3.62□□□□□ -1.83
PRPF39-205ENST00000554081 CFAP65Q6ZU64 1925 aaKnown RBP3.62□□□□□ -1.83
PRPF39-205ENST00000554081 ZMYM3Q14202 1370 aa3.61□□□□□ -1.83
PRPF39-205ENST00000554081 SPDYE2BA6NHP3 402 aa3.61□□□□□ -1.83
PRPF39-205ENST00000554081 SPDYE6P0CI01 402 aa3.61□□□□□ -1.83
PRPF39-205ENST00000554081 HSPA1LP34931 641 aa3.61□□□□□ -1.83
PRPF39-205ENST00000554081 HDGFP51858 240 aaKnown RBP3.61□□□□□ -1.83
PRPF39-205ENST00000554081 MMRN1Q13201 1228 aa3.61□□□□□ -1.83
PRPF39-205ENST00000554081 SPDYE2Q495Y8 402 aa3.61□□□□□ -1.83
PRPF39-205ENST00000554081 C8orf37Q96NL8 207 aa3.61□□□□□ -1.83
PRPF39-205ENST00000554081 KLHL34Q8N239 644 aa3.61□□□□□ -1.83
PRPF39-205ENST00000554081 TMC1Q8TDI8 760 aa3.61□□□□□ -1.83
PRPF39-205ENST00000554081 FBXO41Q8TF61 875 aa3.61□□□□□ -1.83
PRPF39-205ENST00000554081 NGLY1Q96IV0 654 aa3.61□□□□□ -1.83
PRPF39-205ENST00000554081 NUP153P49790 1475 aaKnown RBP3.61□□□□□ -1.83
PRPF39-205ENST00000554081 TROQ12816 1431 aaPredicted RBP3.61□□□□□ -1.83
PRPF39-205ENST00000554081 ESCO1Q5FWF5 840 aa3.61□□□□□ -1.83
PRPF39-205ENST00000554081 TRAK1Q9UPV9 953 aa3.61□□□□□ -1.83
PRPF39-205ENST00000554081 ADCY10Q96PN6 1610 aa3.6□□□□□ -1.83
PRPF39-205ENST00000554081 BIVM-ERCC5R4GMW8 1640 aa3.6□□□□□ -1.83
PRPF39-205ENST00000554081 CUL7Q14999 1698 aa3.6□□□□□ -1.83
PRPF39-205ENST00000554081 FOXO3O43524 673 aa3.6□□□□□ -1.83
PRPF39-205ENST00000554081 PMFBP1Q8TBY8 1022 aa3.6□□□□□ -1.83
PRPF39-205ENST00000554081 UHRF1BP1Q6BDS2 1440 aa3.6□□□□□ -1.83
PRPF39-205ENST00000554081 PPM1GO15355 546 aaPredicted RBP3.6□□□□□ -1.83
PRPF39-205ENST00000554081 CD44P16070 742 aaKnown RBP3.6□□□□□ -1.83
PRPF39-205ENST00000554081 DCAF11Q8TEB1 546 aa3.6□□□□□ -1.83
PRPF39-205ENST00000554081 KIF15Q9NS87 1388 aa3.6□□□□□ -1.83
PRPF39-205ENST00000554081 KIAA0556O60303 1618 aa3.59□□□□□ -1.83
PRPF39-205ENST00000554081 NGDNQ8NEJ9 315 aaKnown RBP3.59□□□□□ -1.83
PRPF39-205ENST00000554081 WDR97A6NE52 1622 aa3.59□□□□□ -1.84
PRPF39-205ENST00000554081 LTKP29376 864 aa3.59□□□□□ -1.84
PRPF39-205ENST00000554081 STRN4Q9NRL3 753 aa3.59□□□□□ -1.84
PRPF39-205ENST00000554081 KAT6BQ8WYB5 2073 aa3.59□□□□□ -1.84
PRPF39-205ENST00000554081 MINK1Q8N4C8 1332 aaPredicted RBP3.58□□□□□ -1.84
PRPF39-205ENST00000554081 PLCH2O75038 1416 aa3.58□□□□□ -1.84
PRPF39-205ENST00000554081 SRPK2P78362 688 aaKnown RBP3.58□□□□□ -1.84
PRPF39-205ENST00000554081 RSPH4AQ5TD94 716 aa3.58□□□□□ -1.84
PRPF39-205ENST00000554081 PPP1R1BQ9UD71 204 aaPredicted RBP3.58□□□□□ -1.84
PRPF39-205ENST00000554081 ANKRD30AQ9BXX3 1397 aa3.58□□□□□ -1.84
PRPF39-205ENST00000554081 WAPLQ7Z5K2 1190 aa3.58□□□□□ -1.84
PRPF39-205ENST00000554081 CABLES1Q8TDN4 633 aa3.58□□□□□ -1.84
PRPF39-205ENST00000554081 AMOTL2Q9Y2J4 779 aa3.58□□□□□ -1.84
PRPF39-205ENST00000554081 KDM5BQ9UGL1 1544 aa3.58□□□□□ -1.84
PRPF39-205ENST00000554081 PTPRMP28827 1452 aa3.57□□□□□ -1.84
PRPF39-205ENST00000554081 CSB-PGBD3P0DP91 1061 aa3.57□□□□□ -1.84
PRPF39-205ENST00000554081 KCNA6P17658 529 aa3.57□□□□□ -1.84
PRPF39-205ENST00000554081 TNNT2P45379 298 aaPredicted RBP3.57□□□□□ -1.84
PRPF39-205ENST00000554081 PSME1Q06323 249 aa3.57□□□□□ -1.84
PRPF39-205ENST00000554081 LTV1Q96GA3 475 aaPredicted RBP3.57□□□□□ -1.84
PRPF39-205ENST00000554081 SIN3AQ96ST3 1273 aa3.57□□□□□ -1.84
PRPF39-205ENST00000554081 TNRQ92752 1358 aa3.57□□□□□ -1.84
PRPF39-205ENST00000554081 FAM182BQ5T319 152 aa3.57□□□□□ -1.84
PRPF39-205ENST00000554081 WWC3Q9ULE0 1092 aa3.57□□□□□ -1.84
PRPF39-205ENST00000554081 TIMELESSQ9UNS1 1208 aa3.57□□□□□ -1.84
PRPF39-205ENST00000554081 PHLDB1Q86UU1 1377 aa3.57□□□□□ -1.84
PRPF39-205ENST00000554081 UGGT2Q9NYU1 1516 aa3.57□□□□□ -1.84
PRPF39-205ENST00000554081 MYCNP04198 464 aaPredicted RBP3.57□□□□□ -1.84
PRPF39-205ENST00000554081 EVA1CP58658 441 aa3.57□□□□□ -1.84
PRPF39-205ENST00000554081 ILDR2Q71H61 639 aa3.57□□□□□ -1.84
PRPF39-205ENST00000554081 SPNS2Q8IVW8 549 aa3.57□□□□□ -1.84
PRPF39-205ENST00000554081 DIP2BQ9P265 1576 aa3.57□□□□□ -1.84
PRPF39-205ENST00000554081 ZC3H6P61129 1189 aaKnown RBP3.56□□□□□ -1.84
PRPF39-205ENST00000554081 VPS8Q8N3P4 1428 aa3.56□□□□□ -1.84
PRPF39-205ENST00000554081 FAM163AQ96GL9 167 aaPredicted RBP3.56□□□□□ -1.84
PRPF39-205ENST00000554081 ZCCHC11Q5TAX3 1644 aaKnown RBP3.56□□□□□ -1.84
PRPF39-205ENST00000554081 SENP3-EIF4A1A0A087X0R7 540 aa3.56□□□□□ -1.84
PRPF39-205ENST00000554081 ATP10AO60312 1499 aa3.56□□□□□ -1.84
PRPF39-205ENST00000554081 NCOA2Q15596 1464 aa3.56□□□□□ -1.84
PRPF39-205ENST00000554081 CASKIN1Q8WXD9 1431 aa3.56□□□□□ -1.84
PRPF39-205ENST00000554081 MIA2Q96PC5 1412 aa3.56□□□□□ -1.84
PRPF39-205ENST00000554081 RAPGEF6Q8TEU7 1601 aa3.55□□□□□ -1.84
PRPF39-205ENST00000554081 SF3B2Q13435 895 aaKnown RBP3.55□□□□□ -1.84
PRPF39-205ENST00000554081 HOMEZQ8IX15 550 aa3.55□□□□□ -1.84
PRPF39-205ENST00000554081 SYTL4Q96C24 671 aaPredicted RBP3.55□□□□□ -1.84
PRPF39-205ENST00000554081 SLAIN2Q9P270 581 aa3.55□□□□□ -1.84
PRPF39-205ENST00000554081 PLEKHH2Q8IVE3 1493 aa3.55□□□□□ -1.84
PRPF39-205ENST00000554081 ZNF518AQ6AHZ1 1483 aa3.55□□□□□ -1.84
PRPF39-205ENST00000554081 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.55□□□□□ -1.842e-6■■■□□ 14.7
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms