RNA–Protein interactions for RNA: ENST00000553599.5

PSEN1-207, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-207ENST00000553599 DEPDC5O75140 1603 aa28.87■■■□□ 2.21
PSEN1-207ENST00000553599 PCGF6Q9BYE7 350 aa28.87■■■□□ 2.21
PSEN1-207ENST00000553599 FAM135AQ9P2D6 1515 aa28.85■■■□□ 2.21
PSEN1-207ENST00000553599 UNC13BO14795 1591 aa28.84■■■□□ 2.21
PSEN1-207ENST00000553599 RAB3GAP2Q9H2M9 1393 aa28.84■■■□□ 2.21
PSEN1-207ENST00000553599 PRDM15P57071 1507 aaPredicted RBP28.84■■■□□ 2.21
PSEN1-207ENST00000553599 GGT6Q6P531 493 aa28.82■■■□□ 2.2
PSEN1-207ENST00000553599 MROH1Q8NDA8 1641 aa28.81■■■□□ 2.2
PSEN1-207ENST00000553599 KANK1Q14678 1352 aa28.81■■■□□ 2.2
PSEN1-207ENST00000553599 KDM5DQ9BY66 1539 aa28.79■■■□□ 2.2
PSEN1-207ENST00000553599 MLECQ14165 292 aa28.77■■■□□ 2.2
PSEN1-207ENST00000553599 VWDEQ8N2E2 1590 aa28.76■■■□□ 2.19
PSEN1-207ENST00000553599 ZC3H13Q5T200 1668 aaKnown RBP28.75■■■□□ 2.19
PSEN1-207ENST00000553599 NUP155O75694 1391 aa28.75■■■□□ 2.19
PSEN1-207ENST00000553599 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.74■■■□□ 2.192e-7■□□□□ 10.6
PSEN1-207ENST00000553599 CNTLNQ9NXG0 1405 aa28.74■■■□□ 2.19
PSEN1-207ENST00000553599 ESF1Q9H501 851 aaKnown RBP28.73■■■□□ 2.19
PSEN1-207ENST00000553599 ADAMTSL3P82987 1691 aa28.73■■■□□ 2.19
PSEN1-207ENST00000553599 IQGAP3Q86VI3 1631 aa28.72■■■□□ 2.19
PSEN1-207ENST00000553599 WASHC2CQ9Y4E1 1318 aa28.72■■■□□ 2.19
PSEN1-207ENST00000553599 LMTK2Q8IWU2 1503 aa28.71■■■□□ 2.19
PSEN1-207ENST00000553599 TRIM52Q96A61 297 aa28.71■■■□□ 2.19
PSEN1-207ENST00000553599 ABCC3O15438 1527 aa28.7■■■□□ 2.19
PSEN1-207ENST00000553599 FER1L4A9Z1Z3 1794 aa28.68■■■□□ 2.18
PSEN1-207ENST00000553599 MROH2AA6NES4 1674 aa28.65■■■□□ 2.18
PSEN1-207ENST00000553599 MADDQ8WXG6 1647 aa28.65■■■□□ 2.18
PSEN1-207ENST00000553599 TET3O43151 1660 aa28.64■■■□□ 2.17
PSEN1-207ENST00000553599 CLTCQ00610 1675 aaKnown RBP28.64■■■□□ 2.17
PSEN1-207ENST00000553599 CEP152O94986 1710 aa28.63■■■□□ 2.17
PSEN1-207ENST00000553599 PZPP20742 1482 aa28.62■■■□□ 2.17
PSEN1-207ENST00000553599 ARHGAP31Q2M1Z3 1444 aa28.61■■■□□ 2.17
PSEN1-207ENST00000553599 CAMSAP1Q5T5Y3 1602 aa28.61■■■□□ 2.17
PSEN1-207ENST00000553599 EFCAB6Q5THR3 1501 aa28.6■■■□□ 2.17
PSEN1-207ENST00000553599 SLC4A1APQ9BWU0 796 aaKnown RBP28.59■■■□□ 2.17
PSEN1-207ENST00000553599 MPHOSPH9Q99550 1183 aa28.58■■■□□ 2.17
PSEN1-207ENST00000553599 ZMYM3Q14202 1370 aa28.58■■■□□ 2.17
PSEN1-207ENST00000553599 RPRD2Q5VT52 1461 aaKnown RBP28.58■■■□□ 2.17
PSEN1-207ENST00000553599 RIMS1Q86UR5 1692 aaKnown RBP28.57■■■□□ 2.16
PSEN1-207ENST00000553599 KDM4FA0A1W2PPD8 638 aa28.53■■■□□ 2.16
PSEN1-207ENST00000553599 NPATQ14207 1427 aa28.52■■■□□ 2.16
PSEN1-207ENST00000553599 PKD2Q13563 968 aa28.5■■■□□ 2.15
PSEN1-207ENST00000553599 PTPRMP28827 1452 aa28.5■■■□□ 2.15
PSEN1-207ENST00000553599 E9PCH4 1651 aa28.5■■■□□ 2.15
PSEN1-207ENST00000553599 C3P01024 1663 aa28.49■■■□□ 2.15
PSEN1-207ENST00000553599 SPATA31D1Q6ZQQ2 1576 aa28.43■■■□□ 2.14
PSEN1-207ENST00000553599 DHX57Q6P158 1386 aaKnown RBP28.43■■■□□ 2.14
PSEN1-207ENST00000553599 PREX1Q8TCU6 1659 aa28.42■■■□□ 2.14
PSEN1-207ENST00000553599 ERVK-7P63135 1459 aa28.42■■■□□ 2.14
PSEN1-207ENST00000553599 NOS1P29475 1434 aa28.42■■■□□ 2.14
PSEN1-207ENST00000553599 PTPRTO14522 1441 aa28.41■■■□□ 2.14
PSEN1-207ENST00000553599 CEBPAP49715 358 aaPredicted RBP28.4■■■□□ 2.14
PSEN1-207ENST00000553599 SPHKAPQ2M3C7 1700 aa28.38■■■□□ 2.13
PSEN1-207ENST00000553599 FBXO31Q5XUX0 539 aaPredicted RBP28.37■■■□□ 2.13
PSEN1-207ENST00000553599 TRPM2O94759 1503 aa28.35■■■□□ 2.13
PSEN1-207ENST00000553599 TNRQ92752 1358 aa28.35■■■□□ 2.13
PSEN1-207ENST00000553599 CFAP65Q6ZU64 1925 aaKnown RBP28.34■■■□□ 2.13
PSEN1-207ENST00000553599 FOXD1Q16676 465 aa28.33■■■□□ 2.13
PSEN1-207ENST00000553599 SLC52A1Q9NWF4 448 aa28.33■■■□□ 2.13
PSEN1-207ENST00000553599 ANKRD30BQ9BXX2 1392 aa28.33■■■□□ 2.13
PSEN1-207ENST00000553599 SETD1BQ9UPS6 1966 aaKnown RBP28.33■■■□□ 2.13
PSEN1-207ENST00000553599 PLA2R1Q13018 1463 aa28.33■■■□□ 2.13
PSEN1-207ENST00000553599 SYNMO15061 1565 aa28.32■■■□□ 2.12
PSEN1-207ENST00000553599 PLPPR3Q6T4P5 718 aa28.3■■■□□ 2.12
PSEN1-207ENST00000553599 NLRP1Q9C000 1473 aa28.29■■■□□ 2.12
PSEN1-207ENST00000553599 CLSPNQ9HAW4 1339 aa28.28■■■□□ 2.12
PSEN1-207ENST00000553599 PIK3C2BO00750 1634 aa28.28■■■□□ 2.12
PSEN1-207ENST00000553599 CCDC144AA2RUR9 1427 aa28.26■■■□□ 2.12
PSEN1-207ENST00000553599 MYO3AQ8NEV4 1616 aa28.23■■■□□ 2.11
PSEN1-207ENST00000553599 IDI1Q13907 227 aa28.22■■■□□ 2.11
PSEN1-207ENST00000553599 CLTCL1P53675 1640 aa28.21■■■□□ 2.11
PSEN1-207ENST00000553599 UHRF1BP1Q6BDS2 1440 aa28.21■■■□□ 2.11
PSEN1-207ENST00000553599 CCER1Q8TC90 406 aaPredicted RBP28.21■■■□□ 2.11
PSEN1-207ENST00000553599 A2ML1A8K2U0 1454 aa28.2■■■□□ 2.1
PSEN1-207ENST00000553599 KDM5AP29375 1690 aaKnown RBP28.19■■■□□ 2.1
PSEN1-207ENST00000553599 UGGT1Q9NYU2 1555 aa28.19■■■□□ 2.1
PSEN1-207ENST00000553599 ZNF142P52746 1687 aaPredicted RBP28.18■■■□□ 2.1
PSEN1-207ENST00000553599 CEP170BQ9Y4F5 1589 aaPredicted RBP28.16■■■□□ 2.1
PSEN1-207ENST00000553599 NEURL4Q96JN8 1562 aa28.16■■■□□ 2.1
PSEN1-207ENST00000553599 ADGRB3O60242 1522 aa28.15■■■□□ 2.1
PSEN1-207ENST00000553599 KIF1BO60333 1816 aa28.15■■■□□ 2.1
PSEN1-207ENST00000553599 TMEM131LA2VDJ0 1609 aa28.12■■■□□ 2.09
PSEN1-207ENST00000553599 STAG3Q9UJ98 1225 aa28.12■■■□□ 2.09
PSEN1-207ENST00000553599 UBR1Q8IWV7 1749 aa28.11■■■□□ 2.09
PSEN1-207ENST00000553599 THEMISQ8N1K5 641 aaPredicted RBP28.09■■■□□ 2.09
PSEN1-207ENST00000553599 SPATA31E1Q6ZUB1 1445 aa28.09■■■□□ 2.09
PSEN1-207ENST00000553599 CHGAP10645 457 aaKnown RBP28.07■■■□□ 2.08
PSEN1-207ENST00000553599 SIN3AQ96ST3 1273 aa28.05■■■□□ 2.08
PSEN1-207ENST00000553599 LMTK3Q96Q04 1460 aa28.04■■■□□ 2.08
PSEN1-207ENST00000553599 RPGRIP1LQ68CZ1 1315 aa28.03■■■□□ 2.08
PSEN1-207ENST00000553599 AEBP2Q6ZN18 517 aaPredicted RBP28.03■■■□□ 2.08
PSEN1-207ENST00000553599 NEUROD1Q13562 356 aa28.01■■■□□ 2.07
PSEN1-207ENST00000553599 SLIT1O75093 1534 aa28.01■■■□□ 2.07
PSEN1-207ENST00000553599 TMEM2Q9UHN6 1383 aa28■■■□□ 2.07
PSEN1-207ENST00000553599 MYO5BQ9ULV0 1848 aa28■■■□□ 2.07
PSEN1-207ENST00000553599 HDGFP51858 240 aaKnown RBP28■■■□□ 2.07
PSEN1-207ENST00000553599 ZNF326Q5BKZ1 582 aaKnown RBP27.99■■■□□ 2.07
PSEN1-207ENST00000553599 ARHGAP23Q9P227 1491 aa27.99■■■□□ 2.07
PSEN1-207ENST00000553599 STAC3Q96MF2 364 aa27.98■■■□□ 2.07
PSEN1-207ENST00000553599 TIMELESSQ9UNS1 1208 aa27.98■■■□□ 2.07
PSEN1-207ENST00000553599 RGL3Q3MIN7 710 aa27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms