RNA–Protein interactions for RNA: ENST00000553249.2

Metazoa_SRP.12-201, humanhuman

BASIC

Gene Metazoa_SRP, Length 268 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Metazoa_SRP.12-201ENST00000553249 PDE4DQ08499 809 aa16.28■□□□□ 0.2
Metazoa_SRP.12-201ENST00000553249 GPBP1L1Q9HC44 474 aaPredicted RBP16.28■□□□□ 0.2
Metazoa_SRP.12-201ENST00000553249 TYW1BQ6NUM6 668 aa16.27■□□□□ 0.2
Metazoa_SRP.12-201ENST00000553249 MAMSTRQ6ZN01 415 aa16.27■□□□□ 0.2
Metazoa_SRP.12-201ENST00000553249 CCDC102AQ96A19 550 aa16.27■□□□□ 0.2
Metazoa_SRP.12-201ENST00000553249 JPH4Q96JJ6 628 aa16.27■□□□□ 0.2
Metazoa_SRP.12-201ENST00000553249 CDHR5Q9HBB8 845 aa16.27■□□□□ 0.2
Metazoa_SRP.12-201ENST00000553249 SCUBE2Q9NQ36 999 aa16.27■□□□□ 0.2
Metazoa_SRP.12-201ENST00000553249 NPDC1Q9NQX5 325 aaPredicted RBP16.27■□□□□ 0.2
Metazoa_SRP.12-201ENST00000553249 MAP3K7O43318 606 aa16.25■□□□□ 0.19
Metazoa_SRP.12-201ENST00000553249 RBM33Q96EV2 1170 aaKnown RBP16.25■□□□□ 0.19
Metazoa_SRP.12-201ENST00000553249 FOSBP53539 338 aa16.24■□□□□ 0.19
Metazoa_SRP.12-201ENST00000553249 ARSIQ5FYB1 569 aa16.24■□□□□ 0.19
Metazoa_SRP.12-201ENST00000553249 KHSRPQ92945 711 aaKnown RBP eCLIP16.24■□□□□ 0.19
Metazoa_SRP.12-201ENST00000553249 SMARCA4P51532 1647 aa16.23■□□□□ 0.19
Metazoa_SRP.12-201ENST00000553249 GPR153Q6NV75 609 aa16.23■□□□□ 0.19
Metazoa_SRP.12-201ENST00000553249 FBXW7Q969H0 707 aa16.23■□□□□ 0.19
Metazoa_SRP.12-201ENST00000553249 ZSWIM6Q9HCJ5 1215 aa16.23■□□□□ 0.19
Metazoa_SRP.12-201ENST00000553249 NUDT7P0C024 238 aa16.22■□□□□ 0.19
Metazoa_SRP.12-201ENST00000553249 KDM4CQ9H3R0 1056 aa16.22■□□□□ 0.19
Metazoa_SRP.12-201ENST00000553249 TSR1Q2NL82 804 aaKnown RBP16.21■□□□□ 0.19
Metazoa_SRP.12-201ENST00000553249 RIMBP2O15034 1052 aa16.19■□□□□ 0.18
Metazoa_SRP.12-201ENST00000553249 WIZO95785 1651 aa16.18■□□□□ 0.18
Metazoa_SRP.12-201ENST00000553249 AMHR2Q16671 573 aa16.18■□□□□ 0.18
Metazoa_SRP.12-201ENST00000553249 ZNF454Q8N9F8 522 aa16.16■□□□□ 0.18
Metazoa_SRP.12-201ENST00000553249 ZDHHC16Q969W1 377 aa16.15■□□□□ 0.18
Metazoa_SRP.12-201ENST00000553249 C6orf132Q5T0Z8 1188 aa16.13■□□□□ 0.17
Metazoa_SRP.12-201ENST00000553249 ZNF710Q8N1W2 664 aa16.13■□□□□ 0.17
Metazoa_SRP.12-201ENST00000553249 PARP9Q8IXQ6 854 aa16.1■□□□□ 0.17
Metazoa_SRP.12-201ENST00000553249 IL27Q8NEV9 243 aa16.1■□□□□ 0.17
Metazoa_SRP.12-201ENST00000553249 ADAM33Q9BZ11 813 aa16.1■□□□□ 0.17
Metazoa_SRP.12-201ENST00000553249 DAXXQ9UER7 740 aaPredicted RBP16.09■□□□□ 0.17
Metazoa_SRP.12-201ENST00000553249 LHX6Q9UPM6 363 aa16.09■□□□□ 0.17
Metazoa_SRP.12-201ENST00000553249 CERKQ8TCT0 537 aa16.08■□□□□ 0.16
Metazoa_SRP.12-201ENST00000553249 SNPHO15079 494 aa16.05■□□□□ 0.16
Metazoa_SRP.12-201ENST00000553249 FAM117AQ9C073 453 aa16.05■□□□□ 0.16
Metazoa_SRP.12-201ENST00000553249 PEG3Q9GZU2 1588 aa16.04■□□□□ 0.16
Metazoa_SRP.12-201ENST00000553249 TIMELESSQ9UNS1 1208 aa16.04■□□□□ 0.16
Metazoa_SRP.12-201ENST00000553249 TOP2AP11388 1531 aaKnown RBP16.02■□□□□ 0.15
Metazoa_SRP.12-201ENST00000553249 HOXB1P14653 301 aaPredicted RBP16.01■□□□□ 0.15
Metazoa_SRP.12-201ENST00000553249 PADI6Q6TGC4 694 aa16.01■□□□□ 0.15
Metazoa_SRP.12-201ENST00000553249 TTC13Q8NBP0 860 aa16.01■□□□□ 0.15
Metazoa_SRP.12-201ENST00000553249 OTUD5Q96G74 571 aa16.01■□□□□ 0.15
Metazoa_SRP.12-201ENST00000553249 PSDA5PKW4 1024 aaPredicted RBP16■□□□□ 0.15
Metazoa_SRP.12-201ENST00000553249 TTLL12Q14166 644 aaPredicted RBP16■□□□□ 0.15
Metazoa_SRP.12-201ENST00000553249 PHOX2BQ99453 314 aa16■□□□□ 0.15
Metazoa_SRP.12-201ENST00000553249 REPIN1Q9BWE0 567 aaKnown RBP16■□□□□ 0.15
Metazoa_SRP.12-201ENST00000553249 RBM27Q9P2N5 1060 aaKnown RBP16■□□□□ 0.15
Metazoa_SRP.12-201ENST00000553249 PPP4R3BQ5MIZ7 849 aa15.99■□□□□ 0.15
Metazoa_SRP.12-201ENST00000553249 EIF4G1Q04637 1599 aaKnown RBP15.98■□□□□ 0.15
Metazoa_SRP.12-201ENST00000553249 TMUB1Q9BVT8 246 aa15.98■□□□□ 0.15
Metazoa_SRP.12-201ENST00000553249 SMARCA2P51531 1590 aa15.97■□□□□ 0.15
Metazoa_SRP.12-201ENST00000553249 PLEKHG3A1L390 1219 aa15.97■□□□□ 0.15
Metazoa_SRP.12-201ENST00000553249 FAM161AQ3B820 660 aa15.97■□□□□ 0.15
Metazoa_SRP.12-201ENST00000553249 BCL2L12Q9HB09 334 aa15.97■□□□□ 0.15
Metazoa_SRP.12-201ENST00000553249 PRSS12P56730 875 aa15.96■□□□□ 0.15
Metazoa_SRP.12-201ENST00000553249 GIGYF2Q6Y7W6 1299 aaKnown RBP15.96■□□□□ 0.15
Metazoa_SRP.12-201ENST00000553249 DDRGK1Q96HY6 314 aa15.96■□□□□ 0.15
Metazoa_SRP.12-201ENST00000553249 ADGRG1Q9Y653 693 aa15.96■□□□□ 0.15
Metazoa_SRP.12-201ENST00000553249 ATAD2BQ9ULI0 1458 aa15.96■□□□□ 0.14
Metazoa_SRP.12-201ENST00000553249 OATP04181 439 aa15.95■□□□□ 0.14
Metazoa_SRP.12-201ENST00000553249 METTL3Q86U44 580 aaKnown RBP15.94■□□□□ 0.14
Metazoa_SRP.12-201ENST00000553249 COL9A1P20849 921 aa15.93■□□□□ 0.14
Metazoa_SRP.12-201ENST00000553249 ERICH6Q7L0X2 663 aa15.93■□□□□ 0.14
Metazoa_SRP.12-201ENST00000553249 CDCA7LQ96GN5 454 aa15.93■□□□□ 0.14
Metazoa_SRP.12-201ENST00000553249 MS4A1P11836 297 aa15.92■□□□□ 0.14
Metazoa_SRP.12-201ENST00000553249 CLCN1P35523 988 aa15.92■□□□□ 0.14
Metazoa_SRP.12-201ENST00000553249 PXYLP1Q8TE99 480 aa15.92■□□□□ 0.14
Metazoa_SRP.12-201ENST00000553249 MDM2Q00987 491 aaPredicted RBP15.91■□□□□ 0.14
Metazoa_SRP.12-201ENST00000553249 GPCPD1Q9NPB8 672 aa15.91■□□□□ 0.14
Metazoa_SRP.12-201ENST00000553249 FAM198AQ9UFP1 575 aa15.89■□□□□ 0.13
Metazoa_SRP.12-201ENST00000553249 PTPREP23469 700 aa15.88■□□□□ 0.13
Metazoa_SRP.12-201ENST00000553249 BAZ1BQ9UIG0 1483 aaKnown RBP15.88■□□□□ 0.13
Metazoa_SRP.12-201ENST00000553249 PPP1R3GB7ZBB8 358 aa15.87■□□□□ 0.13
Metazoa_SRP.12-201ENST00000553249 CCDC88BA6NC98 1476 aa15.85■□□□□ 0.13
Metazoa_SRP.12-201ENST00000553249 LHX8Q68G74 356 aa15.85■□□□□ 0.13
Metazoa_SRP.12-201ENST00000553249 NLRP7Q8WX94 980 aa15.85■□□□□ 0.13
Metazoa_SRP.12-201ENST00000553249 NCAPD3P42695 1498 aa15.84■□□□□ 0.13
Metazoa_SRP.12-201ENST00000553249 SSTR3P32745 418 aaPredicted RBP15.83■□□□□ 0.12
Metazoa_SRP.12-201ENST00000553249 RBM46Q8TBY0 533 aaKnown RBP15.83■□□□□ 0.12
Metazoa_SRP.12-201ENST00000553249 TSKSQ9UJT2 592 aa15.83■□□□□ 0.12
Metazoa_SRP.12-201ENST00000553249 HMGXB3Q12766 1538 aa15.81■□□□□ 0.12
Metazoa_SRP.12-201ENST00000553249 C14orf37Q86TY3 774 aa15.81■□□□□ 0.12
Metazoa_SRP.12-201ENST00000553249 FAM217BQ9NTX9 383 aaPredicted RBP15.81■□□□□ 0.12
Metazoa_SRP.12-201ENST00000553249 EYA1Q99502 592 aa15.8■□□□□ 0.12
Metazoa_SRP.12-201ENST00000553249 GOPCQ9HD26 462 aa15.8■□□□□ 0.12
Metazoa_SRP.12-201ENST00000553249 TRIM6-TRIM34B2RNG4 842 aa15.77■□□□□ 0.12
Metazoa_SRP.12-201ENST00000553249 C3orf80F5H4A9 247 aa15.77■□□□□ 0.12
Metazoa_SRP.12-201ENST00000553249 KCNK17Q96T54 332 aa15.75■□□□□ 0.11
Metazoa_SRP.12-201ENST00000553249 CC2D2AQ9P2K1 1620 aa15.75■□□□□ 0.11
Metazoa_SRP.12-201ENST00000553249 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.74■□□□□ 0.11
Metazoa_SRP.12-201ENST00000553249 RCCD1A6NED2 376 aa15.74■□□□□ 0.11
Metazoa_SRP.12-201ENST00000553249 NUDT18Q6ZVK8 323 aa15.74■□□□□ 0.11
Metazoa_SRP.12-201ENST00000553249 ONECUT3O60422 494 aaPredicted RBP15.73■□□□□ 0.11
Metazoa_SRP.12-201ENST00000553249 BEGAINQ9BUH8 593 aa15.73■□□□□ 0.11
Metazoa_SRP.12-201ENST00000553249 PROX2Q3B8N5 592 aa15.72■□□□□ 0.11
Metazoa_SRP.12-201ENST00000553249 PACS2Q86VP3 889 aa15.72■□□□□ 0.11
Metazoa_SRP.12-201ENST00000553249 TATDN2Q93075 761 aa15.72■□□□□ 0.11
Metazoa_SRP.12-201ENST00000553249 NBPF26B4DH59 902 aa15.7■□□□□ 0.1
Metazoa_SRP.12-201ENST00000553249 ST18O60284 1047 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms