RNA–Protein interactions for RNA: ENST00000553249.2

Metazoa_SRP.12-201, humanhuman

BASIC

Gene Metazoa_SRP, Length 268 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Metazoa_SRP.12-201ENST00000553249 AEBP2Q6ZN18 517 aaPredicted RBP34.93■■■■□ 3.18
Metazoa_SRP.12-201ENST00000553249 CHIC1Q5VXU3 224 aa34.73■■■■□ 3.15
Metazoa_SRP.12-201ENST00000553249 PHF23Q9BUL5 403 aaPredicted RBP30.66■■■□□ 2.5
Metazoa_SRP.12-201ENST00000553249 SENP3Q9H4L4 574 aaPredicted RBP29.47■■■□□ 2.31
Metazoa_SRP.12-201ENST00000553249 PLPPR3Q6T4P5 718 aa28.46■■■□□ 2.15
Metazoa_SRP.12-201ENST00000553249 FOXD1Q16676 465 aa27.31■■□□□ 1.96
Metazoa_SRP.12-201ENST00000553249 PPP6R1Q9UPN7 881 aa26.83■■□□□ 1.89
Metazoa_SRP.12-201ENST00000553249 ADRA2BP18089 450 aa26.82■■□□□ 1.88
Metazoa_SRP.12-201ENST00000553249 PIAS4Q8N2W9 510 aaPredicted RBP25.87■■□□□ 1.73
Metazoa_SRP.12-201ENST00000553249 KCNA4P22459 653 aa25.36■■□□□ 1.65
Metazoa_SRP.12-201ENST00000553249 PPP4R3CPQ6ZMV5 832 aa25.18■■□□□ 1.62
Metazoa_SRP.12-201ENST00000553249 MSH5O43196 834 aa24.87■■□□□ 1.57
Metazoa_SRP.12-201ENST00000553249 NCBP3Q53F19 620 aaKnown RBP24.67■■□□□ 1.54
Metazoa_SRP.12-201ENST00000553249 SCAF1Q9H7N4 1312 aaKnown RBP24.47■■□□□ 1.51
Metazoa_SRP.12-201ENST00000553249 NPM3O75607 178 aaKnown RBP24.37■■□□□ 1.49
Metazoa_SRP.12-201ENST00000553249 CNKSR2Q8WXI2 1034 aa24.32■■□□□ 1.48
Metazoa_SRP.12-201ENST00000553249 EHMT2Q96KQ7 1210 aa24.28■■□□□ 1.48
Metazoa_SRP.12-201ENST00000553249 SLC4A1APQ9BWU0 796 aaKnown RBP24.23■■□□□ 1.47
Metazoa_SRP.12-201ENST00000553249 MAPK8IP2Q13387 824 aaPredicted RBP24.15■■□□□ 1.46
Metazoa_SRP.12-201ENST00000553249 CSRNP3Q8WYN3 585 aa23.78■■□□□ 1.4
Metazoa_SRP.12-201ENST00000553249 RNF216Q9NWF9 866 aaPredicted RBP23.69■■□□□ 1.38
Metazoa_SRP.12-201ENST00000553249 DMRT2Q9Y5R5 561 aa23.66■■□□□ 1.38
Metazoa_SRP.12-201ENST00000553249 DNAJC5BQ9UF47 199 aa23.61■■□□□ 1.37
Metazoa_SRP.12-201ENST00000553249 HOXD11P31277 338 aaPredicted RBP23.45■■□□□ 1.34
Metazoa_SRP.12-201ENST00000553249 ZBTB22O15209 634 aa23.38■■□□□ 1.33
Metazoa_SRP.12-201ENST00000553249 FOXD4L1Q9NU39 408 aa23.12■■□□□ 1.29
Metazoa_SRP.12-201ENST00000553249 SLC4A2P04920 1241 aa22.88■■□□□ 1.25
Metazoa_SRP.12-201ENST00000553249 DCAF8L1A6NGE4 600 aa22.52■■□□□ 1.2
Metazoa_SRP.12-201ENST00000553249 MYCNP04198 464 aaPredicted RBP22.46■■□□□ 1.19
Metazoa_SRP.12-201ENST00000553249 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.28■■□□□ 1.16
Metazoa_SRP.12-201ENST00000553249 ATXN8OSP0DMR3 200 aa22.27■■□□□ 1.16
Metazoa_SRP.12-201ENST00000553249 U3KPZ7 1027 aaPredicted RBP22.05■■□□□ 1.12
Metazoa_SRP.12-201ENST00000553249 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.93■■□□□ 1.1
Metazoa_SRP.12-201ENST00000553249 HNRNPUL2Q1KMD3 747 aaKnown RBP21.93■■□□□ 1.1
Metazoa_SRP.12-201ENST00000553249 SAMD1Q6SPF0 538 aaPredicted RBP21.89■■□□□ 1.09
Metazoa_SRP.12-201ENST00000553249 ATF5Q9Y2D1 282 aaPredicted RBP21.87■■□□□ 1.09
Metazoa_SRP.12-201ENST00000553249 POTEDQ86YR6 584 aa21.53■■□□□ 1.04
Metazoa_SRP.12-201ENST00000553249 APLP2Q06481 763 aa21.52■■□□□ 1.04
Metazoa_SRP.12-201ENST00000553249 RNF39Q9H2S5 420 aa21.42■■□□□ 1.02
Metazoa_SRP.12-201ENST00000553249 ZNF219Q9P2Y4 722 aaPredicted RBP21.42■■□□□ 1.02
Metazoa_SRP.12-201ENST00000553249 FKBP8Q14318 412 aa21.4■■□□□ 1.02
Metazoa_SRP.12-201ENST00000553249 SPINK5Q9NQ38 1064 aaPredicted RBP21.24■□□□□ 0.99
Metazoa_SRP.12-201ENST00000553249 C1QBPQ07021 282 aaKnown RBP21.18■□□□□ 0.98
Metazoa_SRP.12-201ENST00000553249 TRHP20396 242 aaPredicted RBP21.13■□□□□ 0.97
Metazoa_SRP.12-201ENST00000553249 NISCHQ9Y2I1 1504 aa21.12■□□□□ 0.97
Metazoa_SRP.12-201ENST00000553249 CAPN15O75808 1086 aa21.06■□□□□ 0.96
Metazoa_SRP.12-201ENST00000553249 POLA2Q14181 598 aa20.97■□□□□ 0.95
Metazoa_SRP.12-201ENST00000553249 MKRN4PQ13434 485 aaPredicted RBP20.96■□□□□ 0.95
Metazoa_SRP.12-201ENST00000553249 FBLN2P98095 1184 aa20.82■□□□□ 0.92
Metazoa_SRP.12-201ENST00000553249 SPDYE4A6NLX3 237 aa20.75■□□□□ 0.91
Metazoa_SRP.12-201ENST00000553249 ABCB7O75027 752 aa20.74■□□□□ 0.91
Metazoa_SRP.12-201ENST00000553249 AMER1Q5JTC6 1135 aaPredicted RBP20.65■□□□□ 0.9
Metazoa_SRP.12-201ENST00000553249 RTN4Q9NQC3 1192 aaKnown RBP20.65■□□□□ 0.9
Metazoa_SRP.12-201ENST00000553249 ZBTB12Q9Y330 459 aaPredicted RBP20.62■□□□□ 0.89
Metazoa_SRP.12-201ENST00000553249 DSG3P32926 999 aa20.61■□□□□ 0.89
Metazoa_SRP.12-201ENST00000553249 PROM2Q8N271 834 aa20.57■□□□□ 0.88
Metazoa_SRP.12-201ENST00000553249 FBXO3Q9UK99 471 aa20.44■□□□□ 0.86
Metazoa_SRP.12-201ENST00000553249 CACNB1Q02641 598 aaPredicted RBP20.33■□□□□ 0.85
Metazoa_SRP.12-201ENST00000553249 OSCARQ8IYS5 282 aa20.21■□□□□ 0.83
Metazoa_SRP.12-201ENST00000553249 ZNF692Q9BU19 519 aaPredicted RBP20.18■□□□□ 0.82
Metazoa_SRP.12-201ENST00000553249 VASPP50552 380 aaPredicted RBP20.17■□□□□ 0.82
Metazoa_SRP.12-201ENST00000553249 SPDYE2BA6NHP3 402 aa20.16■□□□□ 0.82
Metazoa_SRP.12-201ENST00000553249 SPDYE6P0CI01 402 aa20.16■□□□□ 0.82
Metazoa_SRP.12-201ENST00000553249 SPDYE2Q495Y8 402 aa20.16■□□□□ 0.82
Metazoa_SRP.12-201ENST00000553249 SSUH2Q9Y2M2 353 aa20.1■□□□□ 0.81
Metazoa_SRP.12-201ENST00000553249 IFNLR1Q8IU57 520 aaPredicted RBP19.98■□□□□ 0.79
Metazoa_SRP.12-201ENST00000553249 PABPN1Q86U42 306 aaKnown RBP eCLIP19.94■□□□□ 0.78
Metazoa_SRP.12-201ENST00000553249 STAG3Q9UJ98 1225 aa19.85■□□□□ 0.77
Metazoa_SRP.12-201ENST00000553249 SLC24A1O60721 1099 aa19.69■□□□□ 0.74
Metazoa_SRP.12-201ENST00000553249 KLHL34Q8N239 644 aa19.63■□□□□ 0.73
Metazoa_SRP.12-201ENST00000553249 PLCD3Q8N3E9 789 aa19.62■□□□□ 0.73
Metazoa_SRP.12-201ENST00000553249 MIER1Q8N108 512 aa19.59■□□□□ 0.73
Metazoa_SRP.12-201ENST00000553249 SPOCK2Q92563 424 aa19.59■□□□□ 0.73
Metazoa_SRP.12-201ENST00000553249 PKD2Q13563 968 aa19.57■□□□□ 0.72
Metazoa_SRP.12-201ENST00000553249 RBM42Q9BTD8 480 aaKnown RBP19.56■□□□□ 0.72
Metazoa_SRP.12-201ENST00000553249 AKT1S1Q96B36 256 aa19.5■□□□□ 0.71
Metazoa_SRP.12-201ENST00000553249 SPDYE1Q8NFV5 336 aaPredicted RBP19.39■□□□□ 0.69
Metazoa_SRP.12-201ENST00000553249 PLEKHG5O94827 1062 aa19.38■□□□□ 0.69
Metazoa_SRP.12-201ENST00000553249 ZBTB47Q9UFB7 747 aaPredicted RBP19.35■□□□□ 0.69
Metazoa_SRP.12-201ENST00000553249 REM2Q8IYK8 340 aaPredicted RBP19.32■□□□□ 0.68
Metazoa_SRP.12-201ENST00000553249 ECM2O94769 699 aaPredicted RBP19.28■□□□□ 0.68
Metazoa_SRP.12-201ENST00000553249 DCAF8L2P0C7V8 631 aa19.26■□□□□ 0.67
Metazoa_SRP.12-201ENST00000553249 CLEC11AQ9Y240 323 aa19.25■□□□□ 0.67
Metazoa_SRP.12-201ENST00000553249 PRR29P0C7W0 189 aa19.19■□□□□ 0.66
Metazoa_SRP.12-201ENST00000553249 CREBZFQ9NS37 354 aa19.15■□□□□ 0.66
Metazoa_SRP.12-201ENST00000553249 CIZ1Q9ULV3 898 aaPredicted RBP19.15■□□□□ 0.66
Metazoa_SRP.12-201ENST00000553249 PLCB2Q00722 1185 aa19.11■□□□□ 0.65
Metazoa_SRP.12-201ENST00000553249 RGL2O15211 777 aa19.1■□□□□ 0.65
Metazoa_SRP.12-201ENST00000553249 PITPNM1O00562 1244 aa19.09■□□□□ 0.65
Metazoa_SRP.12-201ENST00000553249 NUBP1P53384 320 aa19.08■□□□□ 0.64
Metazoa_SRP.12-201ENST00000553249 MNX1P50219 401 aaPredicted RBP19.06■□□□□ 0.64
Metazoa_SRP.12-201ENST00000553249 TRIM41Q8WV44 630 aa19■□□□□ 0.63
Metazoa_SRP.12-201ENST00000553249 GSE1Q14687 1217 aa18.99■□□□□ 0.63
Metazoa_SRP.12-201ENST00000553249 NPM1P06748 294 aaKnown RBP eCLIP18.98■□□□□ 0.63
Metazoa_SRP.12-201ENST00000553249 BBXQ8WY36 941 aaPredicted RBP18.92■□□□□ 0.62
Metazoa_SRP.12-201ENST00000553249 DCAF8Q5TAQ9 597 aa18.91■□□□□ 0.62
Metazoa_SRP.12-201ENST00000553249 FAM212AQ96EL1 285 aa18.84■□□□□ 0.61
Metazoa_SRP.12-201ENST00000553249 RASEFQ8IZ41 740 aa18.83■□□□□ 0.6
Metazoa_SRP.12-201ENST00000553249 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.82■□□□□ 0.6
Metazoa_SRP.12-201ENST00000553249 RNF25Q96BH1 459 aaPredicted RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms