RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 POLA1P09884 1462 aaPredicted RBP4.49□□□□□ -1.69
CPSF6-207ENST00000551516 ZNF316A6NFI3 1004 aaPredicted RBP4.49□□□□□ -1.69
CPSF6-207ENST00000551516 TMEM92Q6UXU6 159 aa4.49□□□□□ -1.69
CPSF6-207ENST00000551516 OXER1Q8TDS5 423 aa4.49□□□□□ -1.69
CPSF6-207ENST00000551516 DAXXQ9UER7 740 aaPredicted RBP4.49□□□□□ -1.69
CPSF6-207ENST00000551516 METRNQ9UJH8 293 aa4.49□□□□□ -1.69
CPSF6-207ENST00000551516 CLASP1Q7Z460 1538 aa4.49□□□□□ -1.69
CPSF6-207ENST00000551516 RAD54L2Q9Y4B4 1467 aa4.49□□□□□ -1.69
CPSF6-207ENST00000551516 NUTM2FA1L443 756 aa4.48□□□□□ -1.69
CPSF6-207ENST00000551516 PTGER2P43116 358 aa4.48□□□□□ -1.69
CPSF6-207ENST00000551516 TDRD9Q8NDG6 1382 aaKnown RBP4.48□□□□□ -1.69
CPSF6-207ENST00000551516 POTEFA5A3E0 1075 aa4.47□□□□□ -1.69
CPSF6-207ENST00000551516 EVI5O60447 810 aa4.47□□□□□ -1.69
CPSF6-207ENST00000551516 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.47□□□□□ -1.69
CPSF6-207ENST00000551516 DNMBPQ6XZF7 1577 aa4.47□□□□□ -1.69
CPSF6-207ENST00000551516 EIF4G3O43432 1585 aaKnown RBP4.46□□□□□ -1.7
CPSF6-207ENST00000551516 ABCC8Q09428 1581 aa4.46□□□□□ -1.7
CPSF6-207ENST00000551516 OSBPP22059 807 aa4.46□□□□□ -1.7
CPSF6-207ENST00000551516 PTCD2Q8WV60 388 aaKnown RBP4.46□□□□□ -1.7
CPSF6-207ENST00000551516 DDX12PQ92771 950 aa4.46□□□□□ -1.7
CPSF6-207ENST00000551516 MINK1Q8N4C8 1332 aaPredicted RBP4.46□□□□□ -1.7
CPSF6-207ENST00000551516 SLC34A2O95436 690 aa4.45□□□□□ -1.7
CPSF6-207ENST00000551516 CUX1P39880 1505 aa4.45□□□□□ -1.7
CPSF6-207ENST00000551516 SOGA1O94964 1423 aa4.45□□□□□ -1.7
CPSF6-207ENST00000551516 TRIM66O15016 1216 aa4.44□□□□□ -1.7
CPSF6-207ENST00000551516 GNPATO15228 680 aa4.44□□□□□ -1.7
CPSF6-207ENST00000551516 FCHSD2O94868 740 aa4.44□□□□□ -1.7
CPSF6-207ENST00000551516 POTEIP0CG38 1075 aa4.44□□□□□ -1.7
CPSF6-207ENST00000551516 PDE4DQ08499 809 aa4.44□□□□□ -1.7
CPSF6-207ENST00000551516 HIC1Q14526 733 aa4.44□□□□□ -1.7
CPSF6-207ENST00000551516 MAP2K5Q13163 448 aa4.43□□□□□ -1.7
CPSF6-207ENST00000551516 EPAS1Q99814 870 aa4.43□□□□□ -1.7
CPSF6-207ENST00000551516 ANO8Q9HCE9 1232 aaPredicted RBP4.43□□□□□ -1.7
CPSF6-207ENST00000551516 TIMELESSQ9UNS1 1208 aa4.43□□□□□ -1.7
CPSF6-207ENST00000551516 NUP160Q12769 1436 aa4.43□□□□□ -1.7
CPSF6-207ENST00000551516 SNAPC4Q5SXM2 1469 aa4.43□□□□□ -1.7
CPSF6-207ENST00000551516 IRF6O14896 467 aa4.42□□□□□ -1.7
CPSF6-207ENST00000551516 GPR37O15354 613 aa4.42□□□□□ -1.7
CPSF6-207ENST00000551516 PHF14O94880 888 aa4.42□□□□□ -1.7
CPSF6-207ENST00000551516 ERCC6L2Q5T890 1561 aa4.42□□□□□ -1.7
CPSF6-207ENST00000551516 KDM4CQ9H3R0 1056 aa4.42□□□□□ -1.7
CPSF6-207ENST00000551516 GPBP1L1Q9HC44 474 aaPredicted RBP4.42□□□□□ -1.7
CPSF6-207ENST00000551516 SYNJ2O15056 1496 aa4.42□□□□□ -1.7
CPSF6-207ENST00000551516 FGD5Q6ZNL6 1462 aa4.42□□□□□ -1.7
CPSF6-207ENST00000551516 MAGI1Q96QZ7 1491 aaPredicted RBP4.42□□□□□ -1.7
CPSF6-207ENST00000551516 ABCA10Q8WWZ4 1543 aa4.41□□□□□ -1.7
CPSF6-207ENST00000551516 C14orf37Q86TY3 774 aa4.41□□□□□ -1.7
CPSF6-207ENST00000551516 IL27Q8NEV9 243 aa4.41□□□□□ -1.7
CPSF6-207ENST00000551516 CCDC102AQ96A19 550 aa4.41□□□□□ -1.7
CPSF6-207ENST00000551516 PCDHGA4Q9Y5G9 962 aa4.41□□□□□ -1.7
CPSF6-207ENST00000551516 GRIN2BQ13224 1484 aa4.41□□□□□ -1.7
CPSF6-207ENST00000551516 MAP3K7O43318 606 aa4.4□□□□□ -1.71
CPSF6-207ENST00000551516 EN1Q05925 392 aaPredicted RBP4.4□□□□□ -1.71
CPSF6-207ENST00000551516 PTGDRQ13258 359 aa4.4□□□□□ -1.71
CPSF6-207ENST00000551516 SLAIN1Q8ND83 568 aa4.4□□□□□ -1.71
CPSF6-207ENST00000551516 GAPVD1Q14C86 1478 aa4.4□□□□□ -1.71
CPSF6-207ENST00000551516 WDR97A6NE52 1622 aa4.39□□□□□ -1.71
CPSF6-207ENST00000551516 FECHP22830 423 aa4.39□□□□□ -1.71
CPSF6-207ENST00000551516 TYW1BQ6NUM6 668 aa4.39□□□□□ -1.71
CPSF6-207ENST00000551516 FBXW7Q969H0 707 aa4.39□□□□□ -1.71
CPSF6-207ENST00000551516 PCDHGA10Q9Y5H3 936 aa4.39□□□□□ -1.71
CPSF6-207ENST00000551516 CHD1O14646 1710 aa4.38□□□□□ -1.71
CPSF6-207ENST00000551516 RIMBP2O15034 1052 aa4.38□□□□□ -1.71
CPSF6-207ENST00000551516 PRIM1P49642 420 aaKnown RBP4.38□□□□□ -1.71
CPSF6-207ENST00000551516 AMHR2Q16671 573 aa4.38□□□□□ -1.71
CPSF6-207ENST00000551516 DOK7Q18PE1 504 aa4.38□□□□□ -1.71
CPSF6-207ENST00000551516 RBM33Q96EV2 1170 aaKnown RBP4.38□□□□□ -1.71
CPSF6-207ENST00000551516 DDRGK1Q96HY6 314 aa4.38□□□□□ -1.71
CPSF6-207ENST00000551516 PRDM2Q13029 1718 aa4.38□□□□□ -1.71
CPSF6-207ENST00000551516 ABCA5Q8WWZ7 1642 aa4.37□□□□□ -1.71
CPSF6-207ENST00000551516 KDM4FA0A1W2PPD8 638 aa4.37□□□□□ -1.71
CPSF6-207ENST00000551516 TTLL12Q14166 644 aaPredicted RBP4.37□□□□□ -1.71
CPSF6-207ENST00000551516 CERKQ8TCT0 537 aa4.37□□□□□ -1.71
CPSF6-207ENST00000551516 CHMP7Q8WUX9 453 aaPredicted RBP4.37□□□□□ -1.71
CPSF6-207ENST00000551516 JPH4Q96JJ6 628 aa4.37□□□□□ -1.71
CPSF6-207ENST00000551516 CDHR5Q9HBB8 845 aa4.37□□□□□ -1.71
CPSF6-207ENST00000551516 SHROOM2Q13796 1616 aa4.36□□□□□ -1.71
CPSF6-207ENST00000551516 MAMSTRQ6ZN01 415 aa4.36□□□□□ -1.71
CPSF6-207ENST00000551516 PARP9Q8IXQ6 854 aa4.36□□□□□ -1.71
CPSF6-207ENST00000551516 ZNF710Q8N1W2 664 aa4.36□□□□□ -1.71
CPSF6-207ENST00000551516 ZNF454Q8N9F8 522 aa4.36□□□□□ -1.71
CPSF6-207ENST00000551516 ZDHHC16Q969W1 377 aa4.36□□□□□ -1.71
CPSF6-207ENST00000551516 FAM117AQ9C073 453 aa4.36□□□□□ -1.71
CPSF6-207ENST00000551516 ZSWIM6Q9HCJ5 1215 aa4.36□□□□□ -1.71
CPSF6-207ENST00000551516 SCUBE2Q9NQ36 999 aa4.36□□□□□ -1.71
CPSF6-207ENST00000551516 NPDC1Q9NQX5 325 aaPredicted RBP4.36□□□□□ -1.71
CPSF6-207ENST00000551516 GRIN2AQ12879 1464 aa4.36□□□□□ -1.71
CPSF6-207ENST00000551516 CEP170Q5SW79 1584 aa4.36□□□□□ -1.71
CPSF6-207ENST00000551516 NUDT7P0C024 238 aa4.35□□□□□ -1.71
CPSF6-207ENST00000551516 FOSBP53539 338 aa4.35□□□□□ -1.71
CPSF6-207ENST00000551516 TSR1Q2NL82 804 aaKnown RBP4.35□□□□□ -1.71
CPSF6-207ENST00000551516 C6orf132Q5T0Z8 1188 aa4.35□□□□□ -1.71
CPSF6-207ENST00000551516 OATP04181 439 aa4.34□□□□□ -1.71
CPSF6-207ENST00000551516 CLCN1P35523 988 aa4.34□□□□□ -1.71
CPSF6-207ENST00000551516 ARSIQ5FYB1 569 aa4.34□□□□□ -1.71
CPSF6-207ENST00000551516 IGF1RP08069 1367 aa4.34□□□□□ -1.71
CPSF6-207ENST00000551516 FHAD1B1AJZ9 1412 aa4.34□□□□□ -1.71
CPSF6-207ENST00000551516 COL17A1Q9UMD9 1497 aaPredicted RBP4.34□□□□□ -1.71
CPSF6-207ENST00000551516 SYNJ1O43426 1573 aa4.34□□□□□ -1.71
CPSF6-207ENST00000551516 ABCC10Q5T3U5 1492 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms