RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 SKAP1Q86WV1 359 aa13.01□□□□□ -0.33
SMARCC2-209ENST00000550164 PNNQ9H307 717 aaKnown RBP13.01□□□□□ -0.33
SMARCC2-209ENST00000550164 ADAMTS8Q9UP79 889 aa13.01□□□□□ -0.33
SMARCC2-209ENST00000550164 PMFBP1Q8TBY8 1022 aa13□□□□□ -0.33
SMARCC2-209ENST00000550164 TPRNQ4KMQ1 711 aa13□□□□□ -0.33
SMARCC2-209ENST00000550164 GOLGA6L3A6NEY3 463 aa13□□□□□ -0.33
SMARCC2-209ENST00000550164 ITPRIPQ8IWB1 547 aa12.99□□□□□ -0.33
SMARCC2-209ENST00000550164 ANKRD50Q9ULJ7 1429 aa12.99□□□□□ -0.33
SMARCC2-209ENST00000550164 NBPF1Q3BBV0 1214 aa12.98□□□□□ -0.33
SMARCC2-209ENST00000550164 ERCC6Q03468 1493 aa12.97□□□□□ -0.33
SMARCC2-209ENST00000550164 FRAT2O75474 233 aaPredicted RBP12.97□□□□□ -0.33
SMARCC2-209ENST00000550164 NCOA1Q15788 1441 aa12.96□□□□□ -0.33
SMARCC2-209ENST00000550164 PTMAP06454 111 aaKnown RBP12.96□□□□□ -0.33
SMARCC2-209ENST00000550164 EHBP1L1Q8N3D4 1523 aa12.96□□□□□ -0.33
SMARCC2-209ENST00000550164 PTPRKQ15262 1439 aa12.96□□□□□ -0.33
SMARCC2-209ENST00000550164 E9PSI1 815 aa12.96□□□□□ -0.33
SMARCC2-209ENST00000550164 SMC4Q9NTJ3 1288 aa12.96□□□□□ -0.33
SMARCC2-209ENST00000550164 PEG3Q9GZU2 1588 aa12.96□□□□□ -0.34
SMARCC2-209ENST00000550164 CGNL1Q0VF96 1302 aa12.95□□□□□ -0.34
SMARCC2-209ENST00000550164 POLA1P09884 1462 aaPredicted RBP12.95□□□□□ -0.34
SMARCC2-209ENST00000550164 POGKQ9P215 609 aa12.95□□□□□ -0.34
SMARCC2-209ENST00000550164 ANKRD30BQ9BXX2 1392 aa12.95□□□□□ -0.34
SMARCC2-209ENST00000550164 SRPK2P78362 688 aaKnown RBP12.95□□□□□ -0.34
SMARCC2-209ENST00000550164 MIA2Q96PC5 1412 aa12.95□□□□□ -0.34
SMARCC2-209ENST00000550164 RSPH4AQ5TD94 716 aa12.94□□□□□ -0.34
SMARCC2-209ENST00000550164 KANK1Q14678 1352 aa12.94□□□□□ -0.34
SMARCC2-209ENST00000550164 BIVM-ERCC5R4GMW8 1640 aa12.94□□□□□ -0.34
SMARCC2-209ENST00000550164 FOXD4L1Q9NU39 408 aa12.94□□□□□ -0.34
SMARCC2-209ENST00000550164 AQRO60306 1485 aaKnown RBP eCLIP12.94□□□□□ -0.341e-7■■■■□ 24.9
SMARCC2-209ENST00000550164 HMGXB3Q12766 1538 aa12.94□□□□□ -0.34
SMARCC2-209ENST00000550164 EFCAB2Q5VUJ9 269 aa12.93□□□□□ -0.34
SMARCC2-209ENST00000550164 KIAA1107Q9UPP5 1409 aa12.93□□□□□ -0.34
SMARCC2-209ENST00000550164 NESP48681 1621 aa12.93□□□□□ -0.34
SMARCC2-209ENST00000550164 DNTTIP2Q5QJE6 756 aaKnown RBP12.93□□□□□ -0.34
SMARCC2-209ENST00000550164 PANK1Q8TE04 598 aa12.93□□□□□ -0.34
SMARCC2-209ENST00000550164 KIF3BO15066 747 aa12.92□□□□□ -0.34
SMARCC2-209ENST00000550164 STK26Q9P289 416 aa12.92□□□□□ -0.34
SMARCC2-209ENST00000550164 SUPT6HQ7KZ85 1726 aaKnown RBP12.92□□□□□ -0.34
SMARCC2-209ENST00000550164 CASC1Q6TDU7 716 aa12.92□□□□□ -0.34
SMARCC2-209ENST00000550164 GBP4Q96PP9 640 aa12.92□□□□□ -0.34
SMARCC2-209ENST00000550164 PTPN23Q9H3S7 1636 aa12.92□□□□□ -0.34
SMARCC2-209ENST00000550164 ESF1Q9H501 851 aaKnown RBP12.92□□□□□ -0.34
SMARCC2-209ENST00000550164 APBB1O00213 710 aa12.91□□□□□ -0.34
SMARCC2-209ENST00000550164 TOPBP1Q92547 1522 aa12.91□□□□□ -0.34
SMARCC2-209ENST00000550164 EIF3AQ14152 1382 aaKnown RBP12.91□□□□□ -0.34
SMARCC2-209ENST00000550164 GGT6Q6P531 493 aa12.91□□□□□ -0.34
SMARCC2-209ENST00000550164 RSPH6AQ9H0K4 717 aa12.91□□□□□ -0.34
SMARCC2-209ENST00000550164 PRDM2Q13029 1718 aa12.91□□□□□ -0.34
SMARCC2-209ENST00000550164 DAPK1P53355 1430 aa12.91□□□□□ -0.34
SMARCC2-209ENST00000550164 IPO8O15397 1037 aaKnown RBP12.91□□□□□ -0.34
SMARCC2-209ENST00000550164 TRAK1Q9UPV9 953 aa12.91□□□□□ -0.34
SMARCC2-209ENST00000550164 MSNP26038 577 aaKnown RBP12.9□□□□□ -0.34
SMARCC2-209ENST00000550164 CHMP4BQ9H444 224 aaKnown RBP12.9□□□□□ -0.34
SMARCC2-209ENST00000550164 CDK13Q14004 1512 aaKnown RBP12.89□□□□□ -0.35
SMARCC2-209ENST00000550164 C20orf194Q5TEA3 1177 aa12.89□□□□□ -0.35
SMARCC2-209ENST00000550164 BCAR3O75815 825 aa12.89□□□□□ -0.35
SMARCC2-209ENST00000550164 PPP2R1AP30153 589 aa12.89□□□□□ -0.35
SMARCC2-209ENST00000550164 PLPPR3Q6T4P5 718 aa12.89□□□□□ -0.35
SMARCC2-209ENST00000550164 PLCB2Q00722 1185 aa12.88□□□□□ -0.35
SMARCC2-209ENST00000550164 NUTM2DQ5VT03 806 aaPredicted RBP12.87□□□□□ -0.35
SMARCC2-209ENST00000550164 PRG4Q92954 1404 aaPredicted RBP12.87□□□□□ -0.35
SMARCC2-209ENST00000550164 SPAG9O60271 1321 aaKnown RBP12.87□□□□□ -0.35
SMARCC2-209ENST00000550164 EPRSP07814 1512 aaKnown RBP12.86□□□□□ -0.35
SMARCC2-209ENST00000550164 ZBTB7CA1YPR0 619 aa12.86□□□□□ -0.35
SMARCC2-209ENST00000550164 ZKSCAN2Q63HK3 967 aa12.86□□□□□ -0.35
SMARCC2-209ENST00000550164 RPRD2Q5VT52 1461 aaKnown RBP12.85□□□□□ -0.35
SMARCC2-209ENST00000550164 ARID3AQ99856 593 aa12.84□□□□□ -0.35
SMARCC2-209ENST00000550164 WASHC2CQ9Y4E1 1318 aa12.84□□□□□ -0.35
SMARCC2-209ENST00000550164 ABCA10Q8WWZ4 1543 aa12.84□□□□□ -0.35
SMARCC2-209ENST00000550164 ROCK1Q13464 1354 aa12.83□□□□□ -0.35
SMARCC2-209ENST00000550164 ABCC5O15440 1437 aa12.83□□□□□ -0.36
SMARCC2-209ENST00000550164 DDX11L8A8MPP1 907 aa12.82□□□□□ -0.36
SMARCC2-209ENST00000550164 ELL2O00472 640 aaPredicted RBP12.82□□□□□ -0.36
SMARCC2-209ENST00000550164 CHMP5Q9NZZ3 219 aa12.82□□□□□ -0.36
SMARCC2-209ENST00000550164 HSP90AA2PQ14568 343 aaPredicted RBP12.81□□□□□ -0.36
SMARCC2-209ENST00000550164 SOX12O15370 315 aa12.81□□□□□ -0.36
SMARCC2-209ENST00000550164 DZIP1LQ8IYY4 767 aaKnown RBP12.81□□□□□ -0.36
SMARCC2-209ENST00000550164 PTPRGP23470 1445 aa12.81□□□□□ -0.36
SMARCC2-209ENST00000550164 HECW1Q76N89 1606 aa12.81□□□□□ -0.36
SMARCC2-209ENST00000550164 PLEKHG5O94827 1062 aa12.81□□□□□ -0.36
SMARCC2-209ENST00000550164 ANKRD45Q5TZF3 282 aa12.81□□□□□ -0.36
SMARCC2-209ENST00000550164 C22orf23Q9BZE7 217 aa12.81□□□□□ -0.36
SMARCC2-209ENST00000550164 C9orf84Q5VXU9 1444 aa12.8□□□□□ -0.36
SMARCC2-209ENST00000550164 DNMBPQ6XZF7 1577 aa12.8□□□□□ -0.36
SMARCC2-209ENST00000550164 CALD1Q05682 793 aaKnown RBP12.8□□□□□ -0.36
SMARCC2-209ENST00000550164 NGEFQ8N5V2 710 aa12.8□□□□□ -0.36
SMARCC2-209ENST00000550164 RUNDC1Q96C34 613 aa12.8□□□□□ -0.36
SMARCC2-209ENST00000550164 TROQ12816 1431 aaPredicted RBP12.79□□□□□ -0.36
SMARCC2-209ENST00000550164 HDGFL2Q7Z4V5 671 aaPredicted RBP12.79□□□□□ -0.36
SMARCC2-209ENST00000550164 TCP11L2Q8N4U5 519 aa12.79□□□□□ -0.36
SMARCC2-209ENST00000550164 PDZRN3Q9UPQ7 1066 aa12.79□□□□□ -0.36
SMARCC2-209ENST00000550164 DDX49Q9Y6V7 483 aaKnown RBP12.79□□□□□ -0.36
SMARCC2-209ENST00000550164 PTMSP20962 102 aa12.78□□□□□ -0.36
SMARCC2-209ENST00000550164 LNPKQ9C0E8 428 aa12.78□□□□□ -0.36
SMARCC2-209ENST00000550164 PRKCSHP14314 528 aaPredicted RBP12.78□□□□□ -0.36
SMARCC2-209ENST00000550164 VSIG10Q8N0Z9 540 aa12.77□□□□□ -0.36
SMARCC2-209ENST00000550164 PDE3AQ14432 1141 aa12.77□□□□□ -0.36
SMARCC2-209ENST00000550164 CFAP70Q5T0N1 1121 aa12.77□□□□□ -0.37
SMARCC2-209ENST00000550164 FOXD4L5Q5VV16 416 aaPredicted RBP12.77□□□□□ -0.37
SMARCC2-209ENST00000550164 FOXD4L4Q8WXT5 416 aaPredicted RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms