RNA–Protein interactions for RNA: ENST00000549872.5

CHPT1-205, Transcript of choline phosphotransferase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHPT1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-205ENST00000549872 MLH3Q9UHC1 1453 aa38.29■■■■□ 3.72
CHPT1-205ENST00000549872 DHX29Q7Z478 1369 aaKnown RBP38.28■■■■□ 3.72
CHPT1-205ENST00000549872 PPRC1Q5VV67 1664 aaKnown RBP38.27■■■■□ 3.72
CHPT1-205ENST00000549872 KIF13AQ9H1H9 1805 aa38.25■■■■□ 3.71
CHPT1-205ENST00000549872 RICTORQ6R327 1708 aa38.25■■■■□ 3.71
CHPT1-205ENST00000549872 DEPDC5O75140 1603 aa38.24■■■■□ 3.71
CHPT1-205ENST00000549872 EIF2AK4Q9P2K8 1649 aaKnown RBP38.23■■■■□ 3.71
CHPT1-205ENST00000549872 L3MBTL2Q969R5 705 aa38.22■■■■□ 3.71
CHPT1-205ENST00000549872 KIF3BO15066 747 aa38.19■■■■□ 3.7
CHPT1-205ENST00000549872 A2MP01023 1474 aa38.19■■■■□ 3.7
CHPT1-205ENST00000549872 ABCA6Q8N139 1617 aa38.18■■■■□ 3.7
CHPT1-205ENST00000549872 TEX14Q8IWB6 1497 aa38.18■■■■□ 3.7
CHPT1-205ENST00000549872 FRMPD1Q5SYB0 1578 aa38.14■■■■□ 3.7
CHPT1-205ENST00000549872 DIEXFQ68CQ4 756 aaKnown RBP38.12■■■■□ 3.69
CHPT1-205ENST00000549872 MROH1Q8NDA8 1641 aa38.11■■■■□ 3.69
CHPT1-205ENST00000549872 PRDM15P57071 1507 aaPredicted RBP38.08■■■■□ 3.69
CHPT1-205ENST00000549872 VWDEQ8N2E2 1590 aa38.07■■■■□ 3.69
CHPT1-205ENST00000549872 PLA2R1Q13018 1463 aa38.07■■■■□ 3.69
CHPT1-205ENST00000549872 DIP2CQ9Y2E4 1556 aa38.07■■■■□ 3.68
CHPT1-205ENST00000549872 KANK1Q14678 1352 aa38.07■■■■□ 3.68
CHPT1-205ENST00000549872 E9PCH4 1651 aa38.05■■■■□ 3.68
CHPT1-205ENST00000549872 RNF17Q9BXT8 1623 aaKnown RBP38.02■■■■□ 3.68
CHPT1-205ENST00000549872 TET3O43151 1660 aa38.02■■■■□ 3.68
CHPT1-205ENST00000549872 YEATS2Q9ULM3 1422 aa38.01■■■■□ 3.68
CHPT1-205ENST00000549872 CCDC144AA2RUR9 1427 aa38■■■■□ 3.67
CHPT1-205ENST00000549872 ZMYM4Q5VZL5 1548 aa38■■■■□ 3.67
CHPT1-205ENST00000549872 BCORL1Q5H9F3 1711 aa37.97■■■■□ 3.67
CHPT1-205ENST00000549872 ATP10AO60312 1499 aa37.96■■■■□ 3.67
CHPT1-205ENST00000549872 NBPF8Q3BBV2 869 aa37.95■■■■□ 3.67
CHPT1-205ENST00000549872 CEP152O94986 1710 aa37.91■■■■□ 3.66
CHPT1-205ENST00000549872 GGT6Q6P531 493 aa37.9■■■■□ 3.66
CHPT1-205ENST00000549872 HIRIP3Q9BW71 556 aaPredicted RBP37.88■■■■□ 3.66
CHPT1-205ENST00000549872 SPHKAPQ2M3C7 1700 aa37.88■■■■□ 3.65
CHPT1-205ENST00000549872 COL17A1Q9UMD9 1497 aaPredicted RBP37.87■■■■□ 3.65
CHPT1-205ENST00000549872 LMTK2Q8IWU2 1503 aa37.85■■■■□ 3.65
CHPT1-205ENST00000549872 EFCAB6Q5THR3 1501 aa37.85■■■■□ 3.65
CHPT1-205ENST00000549872 TRPM2O94759 1503 aa37.83■■■■□ 3.65
CHPT1-205ENST00000549872 PTPRTO14522 1441 aa37.83■■■■□ 3.65
CHPT1-205ENST00000549872 ZNF326Q5BKZ1 582 aaKnown RBP37.8■■■■□ 3.64
CHPT1-205ENST00000549872 DCAF11Q8TEB1 546 aa37.78■■■■□ 3.64
CHPT1-205ENST00000549872 RGL3Q3MIN7 710 aa37.78■■■■□ 3.64
CHPT1-205ENST00000549872 KDM2AQ9Y2K7 1162 aa37.77■■■■□ 3.64
CHPT1-205ENST00000549872 ABCC3O15438 1527 aa37.75■■■■□ 3.63
CHPT1-205ENST00000549872 UHRF1BP1Q6BDS2 1440 aa37.75■■■■□ 3.63
CHPT1-205ENST00000549872 WASHC2CQ9Y4E1 1318 aa37.75■■■■□ 3.63
CHPT1-205ENST00000549872 CLTCL1P53675 1640 aa37.74■■■■□ 3.63
CHPT1-205ENST00000549872 HSPA5P11021 654 aaKnown RBP37.7■■■■□ 3.63
CHPT1-205ENST00000549872 DNAJC5Q9H3Z4 198 aa37.68■■■■□ 3.62
CHPT1-205ENST00000549872 REREQ9P2R6 1566 aa37.68■■■■□ 3.62
CHPT1-205ENST00000549872 EIF4G2P78344 907 aaKnown RBP eCLIP37.68■■■■□ 3.62
CHPT1-205ENST00000549872 SPATA31E1Q6ZUB1 1445 aa37.68■■■■□ 3.62
CHPT1-205ENST00000549872 CAMSAP1Q5T5Y3 1602 aa37.67■■■■□ 3.62
CHPT1-205ENST00000549872 NPATQ14207 1427 aa37.67■■■■□ 3.62
CHPT1-205ENST00000549872 UGGT1Q9NYU2 1555 aa37.64■■■■□ 3.62
CHPT1-205ENST00000549872 CFAP65Q6ZU64 1925 aaKnown RBP37.64■■■■□ 3.62
CHPT1-205ENST00000549872 ARHGEF40Q8TER5 1519 aa37.64■■■■□ 3.62
CHPT1-205ENST00000549872 ZC3H13Q5T200 1668 aaKnown RBP37.63■■■■□ 3.61
CHPT1-205ENST00000549872 TRHP20396 242 aaPredicted RBP37.63■■■■□ 3.61
CHPT1-205ENST00000549872 SIGLEC1Q9BZZ2 1709 aa37.62■■■■□ 3.61
CHPT1-205ENST00000549872 RALGAPBQ86X10 1494 aa37.61■■■■□ 3.61
CHPT1-205ENST00000549872 AGLP35573 1532 aa37.6■■■■□ 3.61
CHPT1-205ENST00000549872 PRAG1Q86YV5 1406 aa37.59■■■■□ 3.61
CHPT1-205ENST00000549872 MIER1Q8N108 512 aa37.55■■■■□ 3.6
CHPT1-205ENST00000549872 KIF1BO60333 1816 aa37.53■■■■□ 3.6
CHPT1-205ENST00000549872 DDX10Q13206 875 aaKnown RBP37.52■■■■□ 3.6
CHPT1-205ENST00000549872 TRPM1Q7Z4N2 1603 aa37.52■■■■□ 3.6
CHPT1-205ENST00000549872 ARHGAP31Q2M1Z3 1444 aa37.5■■■■□ 3.59
CHPT1-205ENST00000549872 CNTLNQ9NXG0 1405 aa37.5■■■■□ 3.59
CHPT1-205ENST00000549872 NEURL4Q96JN8 1562 aa37.48■■■■□ 3.59
CHPT1-205ENST00000549872 USP47Q96K76 1375 aa37.47■■■■□ 3.59
CHPT1-205ENST00000549872 CARD11Q9BXL7 1154 aa37.47■■■■□ 3.59
CHPT1-205ENST00000549872 NOS1P29475 1434 aa37.46■■■■□ 3.59
CHPT1-205ENST00000549872 MROH2AA6NES4 1674 aa37.45■■■■□ 3.59
CHPT1-205ENST00000549872 ROCK2O75116 1388 aaKnown RBP37.44■■■■□ 3.58
CHPT1-205ENST00000549872 SYNMO15061 1565 aa37.42■■■■□ 3.58
CHPT1-205ENST00000549872 MLECQ14165 292 aa37.42■■■■□ 3.58
CHPT1-205ENST00000549872 MADDQ8WXG6 1647 aa37.4■■■■□ 3.58
CHPT1-205ENST00000549872 WASHC2AQ641Q2 1341 aa37.39■■■■□ 3.58
CHPT1-205ENST00000549872 CLTCQ00610 1675 aaKnown RBP37.39■■■■□ 3.58
CHPT1-205ENST00000549872 NBPF1Q3BBV0 1214 aa37.39■■■■□ 3.58
CHPT1-205ENST00000549872 PPP6R1Q9UPN7 881 aa37.39■■■■□ 3.58
CHPT1-205ENST00000549872 ADGRB3O60242 1522 aa37.38■■■■□ 3.57
CHPT1-205ENST00000549872 C11orf95C9JLR9 678 aaPredicted RBP37.37■■■■□ 3.57
CHPT1-205ENST00000549872 PREX1Q8TCU6 1659 aa37.36■■■■□ 3.57
CHPT1-205ENST00000549872 PIK3C2BO00750 1634 aa37.36■■■■□ 3.57
CHPT1-205ENST00000549872 CHGAP10645 457 aaKnown RBP37.36■■■■□ 3.57
CHPT1-205ENST00000549872 STAC3Q96MF2 364 aa37.34■■■■□ 3.57
CHPT1-205ENST00000549872 IFT172Q9UG01 1749 aa37.33■■■■□ 3.57
CHPT1-205ENST00000549872 GPRASP1Q5JY77 1395 aa37.32■■■■□ 3.56
CHPT1-205ENST00000549872 POLR1AO95602 1720 aaPredicted RBP37.29■■■■□ 3.56
CHPT1-205ENST00000549872 LAMC1P11047 1609 aa37.29■■■■□ 3.56
CHPT1-205ENST00000549872 FBXO31Q5XUX0 539 aaPredicted RBP37.28■■■■□ 3.56
CHPT1-205ENST00000549872 ARID4BQ4LE39 1312 aaPredicted RBP37.28■■■■□ 3.56
CHPT1-205ENST00000549872 CCDC7Q96M83 1385 aa37.28■■■■□ 3.56
CHPT1-205ENST00000549872 MYOM2P54296 1465 aa37.27■■■■□ 3.56
CHPT1-205ENST00000549872 IDI1Q13907 227 aa37.24■■■■□ 3.55
CHPT1-205ENST00000549872 ERVK-7P63135 1459 aa37.24■■■■□ 3.55
CHPT1-205ENST00000549872 ST20-MTHFSA0A0A6YYL1 179 aa37.24■■■■□ 3.55
CHPT1-205ENST00000549872 KIF7Q2M1P5 1343 aa37.22■■■■□ 3.55
CHPT1-205ENST00000549872 ADGRF5Q8IZF2 1346 aa37.22■■■■□ 3.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms