RNA–Protein interactions for RNA: ENST00000549128.5

CHPT1-204, Transcript of choline phosphotransferase 1, humanhuman

TSL 5

Gene CHPT1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-204ENST00000549128 SETD5Q9C0A6 1442 aa39.52■■■■□ 3.92
CHPT1-204ENST00000549128 KDM4FA0A1W2PPD8 638 aa39.51■■■■□ 3.92
CHPT1-204ENST00000549128 ADAMTSL3P82987 1691 aa39.5■■■■□ 3.91
CHPT1-204ENST00000549128 DEPDC5O75140 1603 aa39.48■■■■□ 3.91
CHPT1-204ENST00000549128 MADDQ8WXG6 1647 aa39.46■■■■□ 3.91
CHPT1-204ENST00000549128 PRDM15P57071 1507 aaPredicted RBP39.43■■■■□ 3.9
CHPT1-204ENST00000549128 RAB3GAP2Q9H2M9 1393 aa39.42■■■■□ 3.9
CHPT1-204ENST00000549128 PCGF6Q9BYE7 350 aa39.42■■■■□ 3.9
CHPT1-204ENST00000549128 PPP6R1Q9UPN7 881 aa39.41■■■■□ 3.9
CHPT1-204ENST00000549128 UNC13BO14795 1591 aa39.4■■■■□ 3.9
CHPT1-204ENST00000549128 FER1L4A9Z1Z3 1794 aa39.4■■■■□ 3.9
CHPT1-204ENST00000549128 WASHC2CQ9Y4E1 1318 aa39.39■■■■□ 3.9
CHPT1-204ENST00000549128 ESF1Q9H501 851 aaKnown RBP39.38■■■■□ 3.89
CHPT1-204ENST00000549128 NUP155O75694 1391 aa39.36■■■■□ 3.89
CHPT1-204ENST00000549128 VWDEQ8N2E2 1590 aa39.35■■■■□ 3.89
CHPT1-204ENST00000549128 CLTCQ00610 1675 aaKnown RBP39.34■■■■□ 3.89
CHPT1-204ENST00000549128 RIMS1Q86UR5 1692 aaKnown RBP39.34■■■■□ 3.89
CHPT1-204ENST00000549128 ABCC3O15438 1527 aa39.34■■■■□ 3.89
CHPT1-204ENST00000549128 KDM5DQ9BY66 1539 aa39.34■■■■□ 3.89
CHPT1-204ENST00000549128 KANK1Q14678 1352 aa39.33■■■■□ 3.89
CHPT1-204ENST00000549128 TRIM52Q96A61 297 aa39.33■■■■□ 3.89
CHPT1-204ENST00000549128 CEP152O94986 1710 aa39.31■■■■□ 3.88
CHPT1-204ENST00000549128 CNTLNQ9NXG0 1405 aa39.29■■■■□ 3.88
CHPT1-204ENST00000549128 CEBPAP49715 358 aaPredicted RBP39.27■■■■□ 3.88
CHPT1-204ENST00000549128 FAM135AQ9P2D6 1515 aa39.27■■■■□ 3.88
CHPT1-204ENST00000549128 ZMYM3Q14202 1370 aa39.27■■■■□ 3.88
CHPT1-204ENST00000549128 PLPPR3Q6T4P5 718 aa39.25■■■■□ 3.87
CHPT1-204ENST00000549128 ZC3H13Q5T200 1668 aaKnown RBP39.25■■■■□ 3.87
CHPT1-204ENST00000549128 PTPRMP28827 1452 aa39.24■■■■□ 3.87
CHPT1-204ENST00000549128 IQGAP3Q86VI3 1631 aa39.24■■■■□ 3.87
CHPT1-204ENST00000549128 LMTK2Q8IWU2 1503 aa39.23■■■■□ 3.87
CHPT1-204ENST00000549128 HRCP23327 699 aa39.22■■■■□ 3.87
CHPT1-204ENST00000549128 MROH2AA6NES4 1674 aa39.2■■■■□ 3.87
CHPT1-204ENST00000549128 PZPP20742 1482 aa39.19■■■■□ 3.86
CHPT1-204ENST00000549128 CAMSAP1Q5T5Y3 1602 aa39.19■■■■□ 3.86
CHPT1-204ENST00000549128 C3P01024 1663 aa39.17■■■■□ 3.86
CHPT1-204ENST00000549128 FBXO31Q5XUX0 539 aaPredicted RBP39.13■■■■□ 3.85
CHPT1-204ENST00000549128 TET3O43151 1660 aa39.13■■■■□ 3.85
CHPT1-204ENST00000549128 SLC4A1APQ9BWU0 796 aaKnown RBP39.12■■■■□ 3.85
CHPT1-204ENST00000549128 NPATQ14207 1427 aa39.12■■■■□ 3.85
CHPT1-204ENST00000549128 EFCAB6Q5THR3 1501 aa39.12■■■■□ 3.85
CHPT1-204ENST00000549128 MPHOSPH9Q99550 1183 aa39.1■■■■□ 3.85
CHPT1-204ENST00000549128 ARHGAP31Q2M1Z3 1444 aa39.1■■■■□ 3.85
CHPT1-204ENST00000549128 ACIN1Q9UKV3 1341 aaKnown RBP39.1■■■■□ 3.85
CHPT1-204ENST00000549128 E9PCH4 1651 aa39.06■■■■□ 3.84
CHPT1-204ENST00000549128 PKD2Q13563 968 aa39.05■■■■□ 3.84
CHPT1-204ENST00000549128 CFAP65Q6ZU64 1925 aaKnown RBP39.04■■■■□ 3.84
CHPT1-204ENST00000549128 FOXD1Q16676 465 aa39.01■■■■□ 3.84
CHPT1-204ENST00000549128 ERVK-7P63135 1459 aa38.98■■■■□ 3.83
CHPT1-204ENST00000549128 RPRD2Q5VT52 1461 aaKnown RBP38.98■■■■□ 3.83
CHPT1-204ENST00000549128 PREX1Q8TCU6 1659 aa38.96■■■■□ 3.83
CHPT1-204ENST00000549128 SPATA31D1Q6ZQQ2 1576 aa38.94■■■■□ 3.82
CHPT1-204ENST00000549128 NOS1P29475 1434 aa38.92■■■■□ 3.82
CHPT1-204ENST00000549128 TNRQ92752 1358 aa38.9■■■■□ 3.82
CHPT1-204ENST00000549128 SYNMO15061 1565 aa38.86■■■■□ 3.81
CHPT1-204ENST00000549128 PLA2R1Q13018 1463 aa38.85■■■■□ 3.81
CHPT1-204ENST00000549128 PTPRTO14522 1441 aa38.84■■■■□ 3.81
CHPT1-204ENST00000549128 SETD1BQ9UPS6 1966 aaKnown RBP38.82■■■■□ 3.81
CHPT1-204ENST00000549128 DHX57Q6P158 1386 aaKnown RBP38.82■■■■□ 3.81
CHPT1-204ENST00000549128 SPHKAPQ2M3C7 1700 aa38.8■■■■□ 3.8
CHPT1-204ENST00000549128 UGGT1Q9NYU2 1555 aa38.8■■■■□ 3.8
CHPT1-204ENST00000549128 AEBP2Q6ZN18 517 aaPredicted RBP38.79■■■■□ 3.8
CHPT1-204ENST00000549128 IDI1Q13907 227 aa38.78■■■■□ 3.8
CHPT1-204ENST00000549128 MYO3AQ8NEV4 1616 aa38.76■■■■□ 3.8
CHPT1-204ENST00000549128 TRPM2O94759 1503 aa38.73■■■■□ 3.79
CHPT1-204ENST00000549128 UHRF1BP1Q6BDS2 1440 aa38.72■■■■□ 3.79
CHPT1-204ENST00000549128 SLC52A1Q9NWF4 448 aa38.72■■■■□ 3.79
CHPT1-204ENST00000549128 ANKRD30BQ9BXX2 1392 aa38.72■■■■□ 3.79
CHPT1-204ENST00000549128 NLRP1Q9C000 1473 aa38.71■■■■□ 3.79
CHPT1-204ENST00000549128 PIK3C2BO00750 1634 aa38.69■■■■□ 3.78
CHPT1-204ENST00000549128 CLTCL1P53675 1640 aa38.67■■■■□ 3.78
CHPT1-204ENST00000549128 CEP170BQ9Y4F5 1589 aaPredicted RBP38.66■■■■□ 3.78
CHPT1-204ENST00000549128 A2ML1A8K2U0 1454 aa38.66■■■■□ 3.78
CHPT1-204ENST00000549128 LMTK3Q96Q04 1460 aa38.65■■■■□ 3.78
CHPT1-204ENST00000549128 ZNF142P52746 1687 aaPredicted RBP38.61■■■■□ 3.77
CHPT1-204ENST00000549128 CCDC144AA2RUR9 1427 aa38.61■■■■□ 3.77
CHPT1-204ENST00000549128 CHGAP10645 457 aaKnown RBP38.59■■■■□ 3.77
CHPT1-204ENST00000549128 HSPA2P54652 639 aa38.58■■■■□ 3.77
CHPT1-204ENST00000549128 STAG3Q9UJ98 1225 aa38.57■■■■□ 3.76
CHPT1-204ENST00000549128 UBR1Q8IWV7 1749 aa38.56■■■■□ 3.76
CHPT1-204ENST00000549128 ADGRB3O60242 1522 aa38.54■■■■□ 3.76
CHPT1-204ENST00000549128 TMEM131LA2VDJ0 1609 aa38.54■■■■□ 3.76
CHPT1-204ENST00000549128 SIN3AQ96ST3 1273 aa38.51■■■■□ 3.76
CHPT1-204ENST00000549128 THEMISQ8N1K5 641 aaPredicted RBP38.5■■■■□ 3.75
CHPT1-204ENST00000549128 MYO5BQ9ULV0 1848 aa38.49■■■■□ 3.75
CHPT1-204ENST00000549128 KIF1BO60333 1816 aa38.46■■■■□ 3.75
CHPT1-204ENST00000549128 KDM5AP29375 1690 aaKnown RBP38.46■■■■□ 3.75
CHPT1-204ENST00000549128 CCER1Q8TC90 406 aaPredicted RBP38.44■■■■□ 3.74
CHPT1-204ENST00000549128 SPATA31E1Q6ZUB1 1445 aa38.43■■■■□ 3.74
CHPT1-204ENST00000549128 RGL3Q3MIN7 710 aa38.41■■■■□ 3.74
CHPT1-204ENST00000549128 TMEM2Q9UHN6 1383 aa38.4■■■■□ 3.74
CHPT1-204ENST00000549128 NEUROD1Q13562 356 aa38.4■■■■□ 3.74
CHPT1-204ENST00000549128 ZNF326Q5BKZ1 582 aaKnown RBP38.4■■■■□ 3.74
CHPT1-204ENST00000549128 ARHGAP23Q9P227 1491 aa38.37■■■■□ 3.73
CHPT1-204ENST00000549128 SLIT1O75093 1534 aa38.36■■■■□ 3.73
CHPT1-204ENST00000549128 LTKP29376 864 aa38.35■■■■□ 3.73
CHPT1-204ENST00000549128 NUTM2DQ5VT03 806 aaPredicted RBP38.35■■■■□ 3.73
CHPT1-204ENST00000549128 ZFYVE9O95405 1425 aa38.33■■■■□ 3.73
CHPT1-204ENST00000549128 RIMS2Q9UQ26 1411 aa38.32■■■■□ 3.73
CHPT1-204ENST00000549128 NCKAP5LQ9HCH0 1330 aa38.32■■■■□ 3.72
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms