RNA–Protein interactions for RNA: ENST00000548512.1

LINC02424-201, Transcript of long intergenic non-protein coding RNA 2424, humanhuman

TSL 1 (best) BASIC

Gene LINC02424, Length 1,264 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02424-201ENST00000548512 C6orf132Q5T0Z8 1188 aa15.52■□□□□ 0.08
LINC02424-201ENST00000548512 ZNF687Q8N1G0 1237 aa15.52■□□□□ 0.08
LINC02424-201ENST00000548512 MAP3K7O43318 606 aa15.51■□□□□ 0.07
LINC02424-201ENST00000548512 NPDC1Q9NQX5 325 aaPredicted RBP15.49■□□□□ 0.07
LINC02424-201ENST00000548512 POTEGQ6S5H5 508 aa15.47■□□□□ 0.07
LINC02424-201ENST00000548512 GPIHBP1Q8IV16 184 aa15.46■□□□□ 0.07
LINC02424-201ENST00000548512 DAXXQ9UER7 740 aaPredicted RBP15.46■□□□□ 0.07
LINC02424-201ENST00000548512 COL9A1P20849 921 aa15.45■□□□□ 0.06
LINC02424-201ENST00000548512 NUTM2FA1L443 756 aa15.44■□□□□ 0.06
LINC02424-201ENST00000548512 POTEMA6NI47 508 aa15.44■□□□□ 0.06
LINC02424-201ENST00000548512 PTPREP23469 700 aa15.44■□□□□ 0.06
LINC02424-201ENST00000548512 PTGDRQ13258 359 aa15.44■□□□□ 0.06
LINC02424-201ENST00000548512 PSEN2P49810 448 aa15.43■□□□□ 0.06
LINC02424-201ENST00000548512 ZC3H15Q8WU90 426 aaKnown RBP15.43■□□□□ 0.06
LINC02424-201ENST00000548512 KCNK17Q96T54 332 aa15.42■□□□□ 0.06
LINC02424-201ENST00000548512 AXIN2Q9Y2T1 843 aa15.42■□□□□ 0.06
LINC02424-201ENST00000548512 ARHGAP33O14559 1287 aa15.41■□□□□ 0.06
LINC02424-201ENST00000548512 PBX2P40425 430 aa15.41■□□□□ 0.06
LINC02424-201ENST00000548512 PPP1R3GB7ZBB8 358 aa15.4■□□□□ 0.06
LINC02424-201ENST00000548512 FCHSD2O94868 740 aa15.38■□□□□ 0.05
LINC02424-201ENST00000548512 DMRTA1Q5VZB9 504 aa15.37■□□□□ 0.05
LINC02424-201ENST00000548512 ZMYND10O75800 440 aa15.34■□□□□ 0.05
LINC02424-201ENST00000548512 CERKQ8TCT0 537 aa15.34■□□□□ 0.05
LINC02424-201ENST00000548512 KRTAP3-3Q9BYR6 98 aa15.34■□□□□ 0.05
LINC02424-201ENST00000548512 KRTAP3-2Q9BYR7 98 aa15.34■□□□□ 0.05
LINC02424-201ENST00000548512 HIC1Q14526 733 aa15.33■□□□□ 0.04
LINC02424-201ENST00000548512 TPRNQ4KMQ1 711 aa15.33■□□□□ 0.04
LINC02424-201ENST00000548512 TTC13Q8NBP0 860 aa15.33■□□□□ 0.04
LINC02424-201ENST00000548512 ZBED2Q9BTP6 218 aa15.33■□□□□ 0.04
LINC02424-201ENST00000548512 FECHP22830 423 aa15.32■□□□□ 0.04
LINC02424-201ENST00000548512 GNPATO15228 680 aa15.31■□□□□ 0.04
LINC02424-201ENST00000548512 FAM198AQ9UFP1 575 aa15.31■□□□□ 0.04
LINC02424-201ENST00000548512 PRSS12P56730 875 aa15.3■□□□□ 0.04
LINC02424-201ENST00000548512 BARGINQ6ZT62 677 aa15.3■□□□□ 0.04
LINC02424-201ENST00000548512 RBM27Q9P2N5 1060 aaKnown RBP15.3■□□□□ 0.04
LINC02424-201ENST00000548512 CDAN1Q8IWY9 1227 aa15.29■□□□□ 0.04
LINC02424-201ENST00000548512 CDCA7LQ96GN5 454 aa15.29■□□□□ 0.04
LINC02424-201ENST00000548512 SLC4A5Q9BY07 1137 aa15.29■□□□□ 0.04
LINC02424-201ENST00000548512 PRKCSHP14314 528 aaPredicted RBP15.28■□□□□ 0.04
LINC02424-201ENST00000548512 LSM11P83369 360 aaKnown RBP eCLIP15.28■□□□□ 0.04
LINC02424-201ENST00000548512 PROX2Q3B8N5 592 aa15.28■□□□□ 0.04
LINC02424-201ENST00000548512 PADI6Q6TGC4 694 aa15.28■□□□□ 0.04
LINC02424-201ENST00000548512 KCNH8Q96L42 1107 aa15.28■□□□□ 0.04
LINC02424-201ENST00000548512 TSKSQ9UJT2 592 aa15.28■□□□□ 0.04
LINC02424-201ENST00000548512 TRIM6-TRIM34B2RNG4 842 aa15.25■□□□□ 0.03
LINC02424-201ENST00000548512 VPS9D1Q9Y2B5 631 aa15.24■□□□□ 0.03
LINC02424-201ENST00000548512 C3orf80F5H4A9 247 aa15.23■□□□□ 0.03
LINC02424-201ENST00000548512 ONECUT3O60422 494 aaPredicted RBP15.23■□□□□ 0.03
LINC02424-201ENST00000548512 TK2O00142 265 aa15.22■□□□□ 0.03
LINC02424-201ENST00000548512 MAP2K5Q13163 448 aa15.2■□□□□ 0.02
LINC02424-201ENST00000548512 ADGRD1Q6QNK2 874 aa15.19■□□□□ 0.02
LINC02424-201ENST00000548512 HRO43593 1189 aa15.17■□□□□ 0.02
LINC02424-201ENST00000548512 KIAA1468Q9P260 1216 aa15.17■□□□□ 0.02
LINC02424-201ENST00000548512 RABGEF1Q9UJ41 708 aa15.17■□□□□ 0.02
LINC02424-201ENST00000548512 ADGRG1Q9Y653 693 aa15.17■□□□□ 0.02
LINC02424-201ENST00000548512 MINK1Q8N4C8 1332 aaPredicted RBP15.17■□□□□ 0.02
LINC02424-201ENST00000548512 BHMG1C9JSJ3 638 aaPredicted RBP15.16■□□□□ 0.02
LINC02424-201ENST00000548512 ANKRD13DQ6ZTN6 518 aa15.16■□□□□ 0.02
LINC02424-201ENST00000548512 IRF6O14896 467 aa15.15■□□□□ 0.02
LINC02424-201ENST00000548512 FAM161AQ3B820 660 aa15.15■□□□□ 0.02
LINC02424-201ENST00000548512 SLC24A3Q9HC58 644 aa15.15■□□□□ 0.02
LINC02424-201ENST00000548512 CCDC102AQ96A19 550 aa15.13■□□□□ 0.01
LINC02424-201ENST00000548512 TTBK1Q5TCY1 1321 aaPredicted RBP15.13■□□□□ 0.01
LINC02424-201ENST00000548512 PACS2Q86VP3 889 aa15.12■□□□□ 0.01
LINC02424-201ENST00000548512 EYA1Q99502 592 aa15.12■□□□□ 0.01
LINC02424-201ENST00000548512 KRI1Q8N9T8 703 aaKnown RBP15.11■□□□□ 0.01
LINC02424-201ENST00000548512 TATDN2Q93075 761 aa15.11■□□□□ 0.01
LINC02424-201ENST00000548512 PCDH10Q9P2E7 1040 aa15.11■□□□□ 0.01
LINC02424-201ENST00000548512 NBPF26B4DH59 902 aa15.09■□□□□ 0.01
LINC02424-201ENST00000548512 SMAPO00193 183 aa15.09■□□□□ 0.01
LINC02424-201ENST00000548512 NUDT18Q6ZVK8 323 aa15.09■□□□□ 0.01
LINC02424-201ENST00000548512 PHOX2BQ99453 314 aa15.09■□□□□ 0.01
LINC02424-201ENST00000548512 PNMA3Q9UL41 463 aa15.09■□□□□ 0.01
LINC02424-201ENST00000548512 PXYLP1Q8TE99 480 aa15.08■□□□□ 0
LINC02424-201ENST00000548512 METTL3Q86U44 580 aaKnown RBP15.07■□□□□ 0
LINC02424-201ENST00000548512 AK7Q96M32 723 aa15.06■□□□□ 0
LINC02424-201ENST00000548512 SEPT9Q9UHD8 586 aaPredicted RBP15.06■□□□□ 0
LINC02424-201ENST00000548512 OATP04181 439 aa15.05■□□□□ -0
LINC02424-201ENST00000548512 MYT1Q01538 1121 aa15.05■□□□□ -0
LINC02424-201ENST00000548512 RBM46Q8TBY0 533 aaKnown RBP15.03■□□□□ -0
LINC02424-201ENST00000548512 NBPF3Q9H094 633 aa15.03■□□□□ -0
LINC02424-201ENST00000548512 TRIM66O15016 1216 aa15.02■□□□□ -0
LINC02424-201ENST00000548512 LAPTM4BQ86VI4 370 aa15.01□□□□□ -0.01
LINC02424-201ENST00000548512 FAM98CQ17RN3 349 aaKnown RBP15□□□□□ -0.01
LINC02424-201ENST00000548512 RCCD1A6NED2 376 aa14.98□□□□□ -0.01
LINC02424-201ENST00000548512 MRPL50Q8N5N7 158 aaKnown RBP14.98□□□□□ -0.01
LINC02424-201ENST00000548512 NLRP7Q8WX94 980 aa14.98□□□□□ -0.01
LINC02424-201ENST00000548512 AMHR2Q16671 573 aa14.97□□□□□ -0.01
LINC02424-201ENST00000548512 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.95□□□□□ -0.02
LINC02424-201ENST00000548512 TMUB1Q9BVT8 246 aa14.95□□□□□ -0.02
LINC02424-201ENST00000548512 DNAJB2P25686 324 aa14.94□□□□□ -0.02
LINC02424-201ENST00000548512 ZFRQ96KR1 1074 aaKnown RBP14.94□□□□□ -0.02
LINC02424-201ENST00000548512 TMEM134Q9H6X4 195 aa14.94□□□□□ -0.02
LINC02424-201ENST00000548512 SPNS2Q8IVW8 549 aa14.93□□□□□ -0.02
LINC02424-201ENST00000548512 REPIN1Q9BWE0 567 aaKnown RBP14.93□□□□□ -0.02
LINC02424-201ENST00000548512 PDE4DQ08499 809 aa14.91□□□□□ -0.02
LINC02424-201ENST00000548512 MDM2Q00987 491 aaPredicted RBP14.89□□□□□ -0.03
LINC02424-201ENST00000548512 SWT1Q5T5J6 900 aaKnown RBP14.89□□□□□ -0.03
LINC02424-201ENST00000548512 SAMD7Q7Z3H4 446 aa14.88□□□□□ -0.03
LINC02424-201ENST00000548512 PARP9Q8IXQ6 854 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms