RNA–Protein interactions for RNA: ENST00000548496.1

KRT18-205, Transcript of keratin 18, humanhuman

TSL 2

Gene KRT18, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18-205ENST00000548496 ANKRD50Q9ULJ7 1429 aa18.27■□□□□ 0.52
KRT18-205ENST00000548496 CLTCQ00610 1675 aaKnown RBP18.27■□□□□ 0.52
KRT18-205ENST00000548496 PTPRMP28827 1452 aa18.26■□□□□ 0.51
KRT18-205ENST00000548496 ERBINQ96RT1 1412 aa18.26■□□□□ 0.51
KRT18-205ENST00000548496 EIF2AK4Q9P2K8 1649 aaKnown RBP18.25■□□□□ 0.51
KRT18-205ENST00000548496 WASHC2CQ9Y4E1 1318 aa18.24■□□□□ 0.51
KRT18-205ENST00000548496 CFAP65Q6ZU64 1925 aaKnown RBP18.24■□□□□ 0.51
KRT18-205ENST00000548496 MROH1Q8NDA8 1641 aa18.23■□□□□ 0.51
KRT18-205ENST00000548496 RNF17Q9BXT8 1623 aaKnown RBP18.23■□□□□ 0.51
KRT18-205ENST00000548496 NAIPQ13075 1403 aa18.23■□□□□ 0.51
KRT18-205ENST00000548496 CEP152O94986 1710 aa18.21■□□□□ 0.51
KRT18-205ENST00000548496 ZMYM3Q14202 1370 aa18.2■□□□□ 0.5
KRT18-205ENST00000548496 C3P01024 1663 aa18.2■□□□□ 0.5
KRT18-205ENST00000548496 GCC2Q8IWJ2 1684 aa18.18■□□□□ 0.5
KRT18-205ENST00000548496 PPP6R1Q9UPN7 881 aa18.18■□□□□ 0.5
KRT18-205ENST00000548496 FBXO31Q5XUX0 539 aaPredicted RBP18.17■□□□□ 0.5
KRT18-205ENST00000548496 ABCC3O15438 1527 aa18.17■□□□□ 0.5
KRT18-205ENST00000548496 DEPDC5O75140 1603 aa18.16■□□□□ 0.5
KRT18-205ENST00000548496 HFM1A2PYH4 1435 aa18.16■□□□□ 0.5
KRT18-205ENST00000548496 CNTLNQ9NXG0 1405 aa18.16■□□□□ 0.5
KRT18-205ENST00000548496 TRIM52Q96A61 297 aa18.16■□□□□ 0.5
KRT18-205ENST00000548496 KDM5DQ9BY66 1539 aa18.16■□□□□ 0.5
KRT18-205ENST00000548496 KANK1Q14678 1352 aa18.16■□□□□ 0.5
KRT18-205ENST00000548496 NUP155O75694 1391 aa18.15■□□□□ 0.5
KRT18-205ENST00000548496 PRDM15P57071 1507 aaPredicted RBP18.14■□□□□ 0.49
KRT18-205ENST00000548496 MROH2AA6NES4 1674 aa18.14■□□□□ 0.49
KRT18-205ENST00000548496 UNC13BO14795 1591 aa18.13■□□□□ 0.49
KRT18-205ENST00000548496 CAMSAP1Q5T5Y3 1602 aa18.12■□□□□ 0.49
KRT18-205ENST00000548496 TRIM26Q12899 539 aaPredicted RBP18.11■□□□□ 0.49
KRT18-205ENST00000548496 SETD5Q9C0A6 1442 aa18.11■□□□□ 0.49
KRT18-205ENST00000548496 VWDEQ8N2E2 1590 aa18.1■□□□□ 0.49
KRT18-205ENST00000548496 ZC3H13Q5T200 1668 aaKnown RBP18.09■□□□□ 0.49
KRT18-205ENST00000548496 SETD1BQ9UPS6 1966 aaKnown RBP18.09■□□□□ 0.49
KRT18-205ENST00000548496 RAB3GAP2Q9H2M9 1393 aa18.07■□□□□ 0.48
KRT18-205ENST00000548496 PZPP20742 1482 aa18.06■□□□□ 0.48
KRT18-205ENST00000548496 IQGAP3Q86VI3 1631 aa18.05■□□□□ 0.48
KRT18-205ENST00000548496 FAM135AQ9P2D6 1515 aa18.05■□□□□ 0.48
KRT18-205ENST00000548496 HSPA2P54652 639 aa18.05■□□□□ 0.48
KRT18-205ENST00000548496 NPATQ14207 1427 aa18.05■□□□□ 0.48
KRT18-205ENST00000548496 LMTK2Q8IWU2 1503 aa18.04■□□□□ 0.48
KRT18-205ENST00000548496 TET3O43151 1660 aa18.03■□□□□ 0.48
KRT18-205ENST00000548496 TNRQ92752 1358 aa18.03■□□□□ 0.48
KRT18-205ENST00000548496 E9PCH4 1651 aa18.03■□□□□ 0.48
KRT18-205ENST00000548496 PREX1Q8TCU6 1659 aa18.03■□□□□ 0.48
KRT18-205ENST00000548496 FOXD1Q16676 465 aa18.02■□□□□ 0.48
KRT18-205ENST00000548496 SLC4A1APQ9BWU0 796 aaKnown RBP18.02■□□□□ 0.48
KRT18-205ENST00000548496 EFCAB6Q5THR3 1501 aa18.02■□□□□ 0.47
KRT18-205ENST00000548496 ERVK-7P63135 1459 aa18.01■□□□□ 0.47
KRT18-205ENST00000548496 PKD2Q13563 968 aa18.01■□□□□ 0.47
KRT18-205ENST00000548496 ARHGAP31Q2M1Z3 1444 aa18■□□□□ 0.47
KRT18-205ENST00000548496 MPHOSPH9Q99550 1183 aa17.99■□□□□ 0.47
KRT18-205ENST00000548496 PCGF6Q9BYE7 350 aa17.99■□□□□ 0.47
KRT18-205ENST00000548496 LMTK3Q96Q04 1460 aa17.99■□□□□ 0.47
KRT18-205ENST00000548496 UHRF1BP1Q6BDS2 1440 aa17.98■□□□□ 0.47
KRT18-205ENST00000548496 SPATA31D1Q6ZQQ2 1576 aa17.98■□□□□ 0.47
KRT18-205ENST00000548496 MYO3AQ8NEV4 1616 aa17.98■□□□□ 0.47
KRT18-205ENST00000548496 IDI1Q13907 227 aa17.95■□□□□ 0.46
KRT18-205ENST00000548496 SYNMO15061 1565 aa17.95■□□□□ 0.46
KRT18-205ENST00000548496 NOS1P29475 1434 aa17.94■□□□□ 0.46
KRT18-205ENST00000548496 UGGT1Q9NYU2 1555 aa17.93■□□□□ 0.46
KRT18-205ENST00000548496 CEP170BQ9Y4F5 1589 aaPredicted RBP17.92■□□□□ 0.46
KRT18-205ENST00000548496 CHGAP10645 457 aaKnown RBP17.92■□□□□ 0.46
KRT18-205ENST00000548496 RPRD2Q5VT52 1461 aaKnown RBP17.92■□□□□ 0.46
KRT18-205ENST00000548496 A2ML1A8K2U0 1454 aa17.91■□□□□ 0.46
KRT18-205ENST00000548496 STAG3Q9UJ98 1225 aa17.91■□□□□ 0.46
KRT18-205ENST00000548496 PIK3C2BO00750 1634 aa17.9■□□□□ 0.46
KRT18-205ENST00000548496 SPHKAPQ2M3C7 1700 aa17.9■□□□□ 0.46
KRT18-205ENST00000548496 HRCP23327 699 aa17.9■□□□□ 0.46
KRT18-205ENST00000548496 NLRP1Q9C000 1473 aa17.88■□□□□ 0.45
KRT18-205ENST00000548496 ZNF142P52746 1687 aaPredicted RBP17.88■□□□□ 0.45
KRT18-205ENST00000548496 MYO5BQ9ULV0 1848 aa17.88■□□□□ 0.45
KRT18-205ENST00000548496 PLA2R1Q13018 1463 aa17.88■□□□□ 0.45
KRT18-205ENST00000548496 SENP3Q9H4L4 574 aaPredicted RBP17.87■□□□□ 0.45
KRT18-205ENST00000548496 NCKAP5LQ9HCH0 1330 aa17.87■□□□□ 0.45
KRT18-205ENST00000548496 SLC52A1Q9NWF4 448 aa17.86■□□□□ 0.45
KRT18-205ENST00000548496 PTPRTO14522 1441 aa17.86■□□□□ 0.45
KRT18-205ENST00000548496 UBR1Q8IWV7 1749 aa17.86■□□□□ 0.45
KRT18-205ENST00000548496 THEMISQ8N1K5 641 aaPredicted RBP17.85■□□□□ 0.45
KRT18-205ENST00000548496 CLTCL1P53675 1640 aa17.84■□□□□ 0.45
KRT18-205ENST00000548496 ACIN1Q9UKV3 1341 aaKnown RBP17.84■□□□□ 0.45
KRT18-205ENST00000548496 NUTM2DQ5VT03 806 aaPredicted RBP17.83■□□□□ 0.44
KRT18-205ENST00000548496 STRCQ7RTU9 1775 aa17.83■□□□□ 0.44
KRT18-205ENST00000548496 TRPM2O94759 1503 aa17.81■□□□□ 0.44
KRT18-205ENST00000548496 TMEM131LA2VDJ0 1609 aa17.8■□□□□ 0.44
KRT18-205ENST00000548496 ADGRB3O60242 1522 aa17.79■□□□□ 0.44
KRT18-205ENST00000548496 LTKP29376 864 aa17.79■□□□□ 0.44
KRT18-205ENST00000548496 ZNF326Q5BKZ1 582 aaKnown RBP17.79■□□□□ 0.44
KRT18-205ENST00000548496 TXNDC2Q86VQ3 553 aa17.79■□□□□ 0.44
KRT18-205ENST00000548496 KIF1BO60333 1816 aa17.78■□□□□ 0.44
KRT18-205ENST00000548496 ANKLE2Q86XL3 938 aa17.78■□□□□ 0.44
KRT18-205ENST00000548496 RGL3Q3MIN7 710 aa17.77■□□□□ 0.44
KRT18-205ENST00000548496 ANKRD30BQ9BXX2 1392 aa17.76■□□□□ 0.43
KRT18-205ENST00000548496 TMEM2Q9UHN6 1383 aa17.76■□□□□ 0.43
KRT18-205ENST00000548496 CCDC144AA2RUR9 1427 aa17.75■□□□□ 0.43
KRT18-205ENST00000548496 DHX57Q6P158 1386 aaKnown RBP17.75■□□□□ 0.43
KRT18-205ENST00000548496 POLR1AO95602 1720 aaPredicted RBP17.74■□□□□ 0.43
KRT18-205ENST00000548496 RIMS2Q9UQ26 1411 aa17.73■□□□□ 0.43
KRT18-205ENST00000548496 BCANQ96GW7 911 aa17.73■□□□□ 0.43
KRT18-205ENST00000548496 EID1Q9Y6B2 187 aa17.73■□□□□ 0.43
KRT18-205ENST00000548496 KDM5AP29375 1690 aaKnown RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms