RNA–Protein interactions for RNA: ENST00000546710.2

LINC02404-201, Transcript of long intergenic non-protein coding RNA 2404, humanhuman

TSL 5 BASIC

Gene LINC02404, Length 1,188 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02404-201ENST00000546710 VPS9D1Q9Y2B5 631 aa12.3□□□□□ -0.44
LINC02404-201ENST00000546710 HRO43593 1189 aa12.29□□□□□ -0.44
LINC02404-201ENST00000546710 NBR1Q14596 966 aa12.29□□□□□ -0.44
LINC02404-201ENST00000546710 RBM33Q96EV2 1170 aaKnown RBP12.29□□□□□ -0.44
LINC02404-201ENST00000546710 ZBED2Q9BTP6 218 aa12.28□□□□□ -0.44
LINC02404-201ENST00000546710 GRXCR2A6NFK2 248 aa12.27□□□□□ -0.45
LINC02404-201ENST00000546710 COL9A1P20849 921 aa12.27□□□□□ -0.45
LINC02404-201ENST00000546710 C6orf132Q5T0Z8 1188 aa12.27□□□□□ -0.45
LINC02404-201ENST00000546710 ARHGEF1Q92888 912 aaKnown RBP12.27□□□□□ -0.45
LINC02404-201ENST00000546710 SLC4A5Q9BY07 1137 aa12.27□□□□□ -0.45
LINC02404-201ENST00000546710 PPP1R3GB7ZBB8 358 aa12.26□□□□□ -0.45
LINC02404-201ENST00000546710 HCSTQ9UBK5 93 aa12.25□□□□□ -0.45
LINC02404-201ENST00000546710 EN1Q05925 392 aaPredicted RBP12.24□□□□□ -0.45
LINC02404-201ENST00000546710 MAP3K7O43318 606 aa12.23□□□□□ -0.45
LINC02404-201ENST00000546710 PRIM1P49642 420 aaKnown RBP12.23□□□□□ -0.45
LINC02404-201ENST00000546710 TSR1Q2NL82 804 aaKnown RBP12.22□□□□□ -0.45
LINC02404-201ENST00000546710 PROX2Q3B8N5 592 aa12.22□□□□□ -0.45
LINC02404-201ENST00000546710 P3H3Q8IVL6 736 aa12.22□□□□□ -0.45
LINC02404-201ENST00000546710 PLA2G2EQ9NZK7 142 aa12.22□□□□□ -0.45
LINC02404-201ENST00000546710 STAC3Q96MF2 364 aa12.21□□□□□ -0.45
LINC02404-201ENST00000546710 OSBPP22059 807 aa12.2□□□□□ -0.46
LINC02404-201ENST00000546710 KDM2AQ9Y2K7 1162 aa12.2□□□□□ -0.46
LINC02404-201ENST00000546710 BHMG1C9JSJ3 638 aaPredicted RBP12.19□□□□□ -0.46
LINC02404-201ENST00000546710 MLLT3P42568 568 aaPredicted RBP12.17□□□□□ -0.46
LINC02404-201ENST00000546710 MRPL50Q8N5N7 158 aaKnown RBP12.14□□□□□ -0.47
LINC02404-201ENST00000546710 KCTD12Q96CX2 325 aaKnown RBP12.14□□□□□ -0.47
LINC02404-201ENST00000546710 RABGEF1Q9UJ41 708 aa12.14□□□□□ -0.47
LINC02404-201ENST00000546710 NBPF3Q9H094 633 aa12.13□□□□□ -0.47
LINC02404-201ENST00000546710 CDHR5Q9HBB8 845 aa12.12□□□□□ -0.47
LINC02404-201ENST00000546710 KIAA1468Q9P260 1216 aa12.12□□□□□ -0.47
LINC02404-201ENST00000546710 TRIM6-TRIM34B2RNG4 842 aa12.11□□□□□ -0.47
LINC02404-201ENST00000546710 SEMA3EO15041 775 aa12.1□□□□□ -0.47
LINC02404-201ENST00000546710 GOLGA8CPA6NN73 597 aa12.09□□□□□ -0.47
LINC02404-201ENST00000546710 ONECUT3O60422 494 aaPredicted RBP12.09□□□□□ -0.47
LINC02404-201ENST00000546710 VSIG10Q8N0Z9 540 aa12.09□□□□□ -0.47
LINC02404-201ENST00000546710 CERKQ8TCT0 537 aa12.07□□□□□ -0.48
LINC02404-201ENST00000546710 CDCA7LQ96GN5 454 aa12.07□□□□□ -0.48
LINC02404-201ENST00000546710 TSKSQ9UJT2 592 aa12.07□□□□□ -0.48
LINC02404-201ENST00000546710 PRSS12P56730 875 aa12.06□□□□□ -0.48
LINC02404-201ENST00000546710 SEPT9Q9UHD8 586 aaPredicted RBP12.06□□□□□ -0.48
LINC02404-201ENST00000546710 ABCC9O60706 1549 aa12.06□□□□□ -0.48
LINC02404-201ENST00000546710 WNT2BQ93097 391 aa12.05□□□□□ -0.48
LINC02404-201ENST00000546710 FAM198AQ9UFP1 575 aa12.04□□□□□ -0.48
LINC02404-201ENST00000546710 LAPTM4BQ86VI4 370 aa12.03□□□□□ -0.48
LINC02404-201ENST00000546710 PACS2Q86VP3 889 aa12.03□□□□□ -0.48
LINC02404-201ENST00000546710 NPDC1Q9NQX5 325 aaPredicted RBP12.03□□□□□ -0.48
LINC02404-201ENST00000546710 PTPN5P54829 565 aa12.02□□□□□ -0.49
LINC02404-201ENST00000546710 THSD4Q6ZMP0 1018 aa12.02□□□□□ -0.49
LINC02404-201ENST00000546710 TESPA1A2RU30 521 aaPredicted RBP12□□□□□ -0.49
LINC02404-201ENST00000546710 FAM98CQ17RN3 349 aaKnown RBP11.99□□□□□ -0.49
LINC02404-201ENST00000546710 ANKK1Q8NFD2 765 aa11.99□□□□□ -0.49
LINC02404-201ENST00000546710 ZFRQ96KR1 1074 aaKnown RBP11.99□□□□□ -0.49
LINC02404-201ENST00000546710 C3orf80F5H4A9 247 aa11.98□□□□□ -0.49
LINC02404-201ENST00000546710 SMAPO00193 183 aa11.98□□□□□ -0.49
LINC02404-201ENST00000546710 PADI6Q6TGC4 694 aa11.97□□□□□ -0.49
LINC02404-201ENST00000546710 RBM27Q9P2N5 1060 aaKnown RBP11.97□□□□□ -0.49
LINC02404-201ENST00000546710 NUTM2FA1L443 756 aa11.96□□□□□ -0.49
LINC02404-201ENST00000546710 BCAMP50895 628 aa11.95□□□□□ -0.5
LINC02404-201ENST00000546710 PTGDRQ13258 359 aa11.95□□□□□ -0.5
LINC02404-201ENST00000546710 TTC13Q8NBP0 860 aa11.95□□□□□ -0.5
LINC02404-201ENST00000546710 TATDN2Q93075 761 aa11.95□□□□□ -0.5
LINC02404-201ENST00000546710 PNMA3Q9UL41 463 aa11.95□□□□□ -0.5
LINC02404-201ENST00000546710 NBPF26B4DH59 902 aa11.94□□□□□ -0.5
LINC02404-201ENST00000546710 SOWAHBA6NEL2 793 aa11.93□□□□□ -0.5
LINC02404-201ENST00000546710 RBM26Q5T8P6 1007 aaKnown RBP11.93□□□□□ -0.5
LINC02404-201ENST00000546710 NUDT18Q6ZVK8 323 aa11.93□□□□□ -0.5
LINC02404-201ENST00000546710 SMYD5Q6GMV2 418 aa11.92□□□□□ -0.5
LINC02404-201ENST00000546710 LRCH3Q96II8 777 aa11.89□□□□□ -0.51
LINC02404-201ENST00000546710 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.89□□□□□ -0.51
LINC02404-201ENST00000546710 FCHSD2O94868 740 aa11.88□□□□□ -0.51
LINC02404-201ENST00000546710 SAMD7Q7Z3H4 446 aa11.87□□□□□ -0.51
LINC02404-201ENST00000546710 RGS20O76081 388 aa11.86□□□□□ -0.51
LINC02404-201ENST00000546710 WBP1LQ9NX94 342 aa11.86□□□□□ -0.51
LINC02404-201ENST00000546710 HPS5Q9UPZ3 1129 aa11.85□□□□□ -0.51
LINC02404-201ENST00000546710 IFFO2Q5TF58 517 aa11.83□□□□□ -0.52
LINC02404-201ENST00000546710 EYA1Q99502 592 aa11.83□□□□□ -0.52
LINC02404-201ENST00000546710 TSR3Q9UJK0 312 aaKnown RBP11.83□□□□□ -0.52
LINC02404-201ENST00000546710 FAM161AQ3B820 660 aa11.82□□□□□ -0.52
LINC02404-201ENST00000546710 ADGRG1Q9Y653 693 aa11.81□□□□□ -0.52
LINC02404-201ENST00000546710 GPR37O15354 613 aa11.8□□□□□ -0.52
LINC02404-201ENST00000546710 HIC1Q14526 733 aa11.8□□□□□ -0.52
LINC02404-201ENST00000546710 SWT1Q5T5J6 900 aaKnown RBP11.79□□□□□ -0.52
LINC02404-201ENST00000546710 RNF40O75150 1001 aa11.78□□□□□ -0.52
LINC02404-201ENST00000546710 HDGFP51858 240 aaKnown RBP11.78□□□□□ -0.52
LINC02404-201ENST00000546710 PPP4CP60510 307 aa11.78□□□□□ -0.52
LINC02404-201ENST00000546710 NYAP1Q6ZVC0 841 aa11.78□□□□□ -0.52
LINC02404-201ENST00000546710 RBM46Q8TBY0 533 aaKnown RBP11.78□□□□□ -0.52
LINC02404-201ENST00000546710 GNPATO15228 680 aa11.77□□□□□ -0.53
LINC02404-201ENST00000546710 FECHP22830 423 aa11.77□□□□□ -0.53
LINC02404-201ENST00000546710 GPIHBP1Q8IV16 184 aa11.76□□□□□ -0.53
LINC02404-201ENST00000546710 IRX2Q9BZI1 471 aaPredicted RBP11.76□□□□□ -0.53
LINC02404-201ENST00000546710 A0A0G2JS52 829 aa11.75□□□□□ -0.53
LINC02404-201ENST00000546710 TULP1O00294 542 aaPredicted RBP11.74□□□□□ -0.53
LINC02404-201ENST00000546710 DNAJB2P25686 324 aa11.73□□□□□ -0.53
LINC02404-201ENST00000546710 RCCD1A6NED2 376 aa11.72□□□□□ -0.53
LINC02404-201ENST00000546710 SLF2Q8IX21 1173 aa11.71□□□□□ -0.53
LINC02404-201ENST00000546710 TMEM134Q9H6X4 195 aa11.71□□□□□ -0.53
LINC02404-201ENST00000546710 ITGBL1O95965 494 aaPredicted RBP11.7□□□□□ -0.54
LINC02404-201ENST00000546710 OATP04181 439 aa11.7□□□□□ -0.54
LINC02404-201ENST00000546710 PXYLP1Q8TE99 480 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms