RNA–Protein interactions for RNA: ENST00000544907.6

TNFAIP1-202, Transcript of TNF alpha induced protein 1, humanhuman

TSL 2 BASIC

Gene TNFAIP1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-202ENST00000544907 SYCP2Q9BX26 1530 aa25.18■■□□□ 1.62
TNFAIP1-202ENST00000544907 EFCAB2Q5VUJ9 269 aa25.17■■□□□ 1.62
TNFAIP1-202ENST00000544907 UNC13BO14795 1591 aa25.17■■□□□ 1.62
TNFAIP1-202ENST00000544907 ARID4BQ4LE39 1312 aaPredicted RBP25.15■■□□□ 1.62
TNFAIP1-202ENST00000544907 FAM135AQ9P2D6 1515 aa25.13■■□□□ 1.61
TNFAIP1-202ENST00000544907 ADGRL1O94910 1474 aa25.12■■□□□ 1.61
TNFAIP1-202ENST00000544907 RALGAPBQ86X10 1494 aa25.12■■□□□ 1.61
TNFAIP1-202ENST00000544907 DUOX2Q9NRD8 1548 aa25.11■■□□□ 1.61
TNFAIP1-202ENST00000544907 ABCC1P33527 1531 aa25.09■■□□□ 1.61
TNFAIP1-202ENST00000544907 ERBINQ96RT1 1412 aa25.09■■□□□ 1.61
TNFAIP1-202ENST00000544907 MAGI2Q86UL8 1455 aa25.08■■□□□ 1.6
TNFAIP1-202ENST00000544907 IQGAP3Q86VI3 1631 aa25.05■■□□□ 1.6
TNFAIP1-202ENST00000544907 SCAPERQ9BY12 1400 aa25.05■■□□□ 1.6
TNFAIP1-202ENST00000544907 ATP10AO60312 1499 aa25.04■■□□□ 1.6
TNFAIP1-202ENST00000544907 KDM5CP41229 1560 aa25.04■■□□□ 1.6
TNFAIP1-202ENST00000544907 USP47Q96K76 1375 aa25.03■■□□□ 1.6
TNFAIP1-202ENST00000544907 KIF7Q2M1P5 1343 aa25.03■■□□□ 1.6
TNFAIP1-202ENST00000544907 SUPT16HQ9Y5B9 1047 aaKnown RBP25.03■■□□□ 1.6
TNFAIP1-202ENST00000544907 COL17A1Q9UMD9 1497 aaPredicted RBP25.02■■□□□ 1.6
TNFAIP1-202ENST00000544907 RTEL1-TNFRSF6BF6WH68 1400 aa25.02■■□□□ 1.6
TNFAIP1-202ENST00000544907 C11orf95C9JLR9 678 aaPredicted RBP25.02■■□□□ 1.6
TNFAIP1-202ENST00000544907 RICTORQ6R327 1708 aa25.01■■□□□ 1.59
TNFAIP1-202ENST00000544907 POGZQ7Z3K3 1410 aa25■■□□□ 1.59
TNFAIP1-202ENST00000544907 FRMPD1Q5SYB0 1578 aa24.99■■□□□ 1.59
TNFAIP1-202ENST00000544907 ZNF518AQ6AHZ1 1483 aa24.98■■□□□ 1.59
TNFAIP1-202ENST00000544907 ROCK2O75116 1388 aaKnown RBP24.98■■□□□ 1.59
TNFAIP1-202ENST00000544907 CCDC144AA2RUR9 1427 aa24.97■■□□□ 1.59
TNFAIP1-202ENST00000544907 PRKRIP1Q9H875 184 aaPredicted RBP24.96■■□□□ 1.59
TNFAIP1-202ENST00000544907 RAPGEF3O95398 923 aa24.95■■□□□ 1.58
TNFAIP1-202ENST00000544907 TRAPPC8Q9Y2L5 1435 aa24.95■■□□□ 1.58
TNFAIP1-202ENST00000544907 PLA2R1Q13018 1463 aa24.92■■□□□ 1.58
TNFAIP1-202ENST00000544907 ZMYM4Q5VZL5 1548 aa24.92■■□□□ 1.58
TNFAIP1-202ENST00000544907 AFAP1Q8N556 730 aa24.9■■□□□ 1.58
TNFAIP1-202ENST00000544907 PRAG1Q86YV5 1406 aa24.89■■□□□ 1.57
TNFAIP1-202ENST00000544907 BCORL1Q5H9F3 1711 aa24.88■■□□□ 1.57
TNFAIP1-202ENST00000544907 HECW2Q9P2P5 1572 aa24.88■■□□□ 1.57
TNFAIP1-202ENST00000544907 LAMC1P11047 1609 aa24.88■■□□□ 1.57
TNFAIP1-202ENST00000544907 GPRASP1Q5JY77 1395 aa24.87■■□□□ 1.57
TNFAIP1-202ENST00000544907 CARD11Q9BXL7 1154 aa24.87■■□□□ 1.57
TNFAIP1-202ENST00000544907 ZFYVE16Q7Z3T8 1539 aa24.86■■□□□ 1.57
TNFAIP1-202ENST00000544907 DHX29Q7Z478 1369 aaKnown RBP24.85■■□□□ 1.57
TNFAIP1-202ENST00000544907 DCAF11Q8TEB1 546 aa24.85■■□□□ 1.57
TNFAIP1-202ENST00000544907 TRPM1Q7Z4N2 1603 aa24.84■■□□□ 1.57
TNFAIP1-202ENST00000544907 EIF2AK4Q9P2K8 1649 aaKnown RBP24.83■■□□□ 1.57
TNFAIP1-202ENST00000544907 INO80Q9ULG1 1556 aaPredicted RBP24.83■■□□□ 1.57
TNFAIP1-202ENST00000544907 SPAG9O60271 1321 aaKnown RBP24.83■■□□□ 1.57
TNFAIP1-202ENST00000544907 MYT1LQ9UL68 1186 aa24.83■■□□□ 1.57
TNFAIP1-202ENST00000544907 MLH3Q9UHC1 1453 aa24.83■■□□□ 1.56
TNFAIP1-202ENST00000544907 ZNF326Q5BKZ1 582 aaKnown RBP24.82■■□□□ 1.56
TNFAIP1-202ENST00000544907 ATP7AQ04656 1500 aa24.82■■□□□ 1.56
TNFAIP1-202ENST00000544907 DEPDC5O75140 1603 aa24.82■■□□□ 1.56
TNFAIP1-202ENST00000544907 ARHGEF40Q8TER5 1519 aa24.81■■□□□ 1.56
TNFAIP1-202ENST00000544907 KIDINS220Q9ULH0 1771 aa24.81■■□□□ 1.56
TNFAIP1-202ENST00000544907 KTN1Q86UP2 1357 aaKnown RBP24.8■■□□□ 1.56
TNFAIP1-202ENST00000544907 STAC3Q96MF2 364 aa24.8■■□□□ 1.56
TNFAIP1-202ENST00000544907 A2MP01023 1474 aa24.8■■□□□ 1.56
TNFAIP1-202ENST00000544907 NEFLP07196 543 aa24.78■■□□□ 1.56
TNFAIP1-202ENST00000544907 YEATS2Q9ULM3 1422 aa24.77■■□□□ 1.56
TNFAIP1-202ENST00000544907 HNRNPUQ00839 825 aaKnown RBP eCLIP24.77■■□□□ 1.56
TNFAIP1-202ENST00000544907 ABCA6Q8N139 1617 aa24.77■■□□□ 1.56
TNFAIP1-202ENST00000544907 PTPRTO14522 1441 aa24.75■■□□□ 1.55
TNFAIP1-202ENST00000544907 VWDEQ8N2E2 1590 aa24.75■■□□□ 1.55
TNFAIP1-202ENST00000544907 NEURL4Q96JN8 1562 aa24.75■■□□□ 1.55
TNFAIP1-202ENST00000544907 DIP2CQ9Y2E4 1556 aa24.75■■□□□ 1.55
TNFAIP1-202ENST00000544907 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.75■■□□□ 1.55
TNFAIP1-202ENST00000544907 TRPM2O94759 1503 aa24.74■■□□□ 1.55
TNFAIP1-202ENST00000544907 MRS2Q9HD23 443 aa24.74■■□□□ 1.55
TNFAIP1-202ENST00000544907 KDM2AQ9Y2K7 1162 aa24.74■■□□□ 1.55
TNFAIP1-202ENST00000544907 PRDM15P57071 1507 aaPredicted RBP24.74■■□□□ 1.55
TNFAIP1-202ENST00000544907 ST20-MTHFSA0A0A6YYL1 179 aa24.72■■□□□ 1.55
TNFAIP1-202ENST00000544907 ZBED9Q6R2W3 1325 aa24.71■■□□□ 1.55
TNFAIP1-202ENST00000544907 TET3O43151 1660 aa24.7■■□□□ 1.54
TNFAIP1-202ENST00000544907 E9PCH4 1651 aa24.69■■□□□ 1.54
TNFAIP1-202ENST00000544907 FKBP8Q14318 412 aa24.69■■□□□ 1.54
TNFAIP1-202ENST00000544907 KANK1Q14678 1352 aa24.68■■□□□ 1.54
TNFAIP1-202ENST00000544907 CCDC184Q52MB2 194 aa24.68■■□□□ 1.54
TNFAIP1-202ENST00000544907 RNF17Q9BXT8 1623 aaKnown RBP24.67■■□□□ 1.54
TNFAIP1-202ENST00000544907 REREQ9P2R6 1566 aa24.65■■□□□ 1.54
TNFAIP1-202ENST00000544907 ERICH6BQ5W0A0 696 aa24.65■■□□□ 1.54
TNFAIP1-202ENST00000544907 RALBP1Q15311 655 aa24.63■■□□□ 1.53
TNFAIP1-202ENST00000544907 SPHKAPQ2M3C7 1700 aa24.63■■□□□ 1.53
TNFAIP1-202ENST00000544907 WASHC2CQ9Y4E1 1318 aa24.63■■□□□ 1.53
TNFAIP1-202ENST00000544907 CEP152O94986 1710 aa24.61■■□□□ 1.53
TNFAIP1-202ENST00000544907 RGL3Q3MIN7 710 aa24.61■■□□□ 1.53
TNFAIP1-202ENST00000544907 SIGLEC1Q9BZZ2 1709 aa24.6■■□□□ 1.53
TNFAIP1-202ENST00000544907 LMTK2Q8IWU2 1503 aa24.59■■□□□ 1.53
TNFAIP1-202ENST00000544907 BRD4O60885 1362 aaPredicted RBP24.58■■□□□ 1.53
TNFAIP1-202ENST00000544907 FAM9BQ8IZU0 186 aa24.58■■□□□ 1.53
TNFAIP1-202ENST00000544907 MROH1Q8NDA8 1641 aa24.58■■□□□ 1.52
TNFAIP1-202ENST00000544907 MADDQ8WXG6 1647 aa24.58■■□□□ 1.52
TNFAIP1-202ENST00000544907 NBPF1Q3BBV0 1214 aa24.56■■□□□ 1.52
TNFAIP1-202ENST00000544907 AGLP35573 1532 aa24.56■■□□□ 1.52
TNFAIP1-202ENST00000544907 TESK2Q96S53 571 aa24.56■■□□□ 1.52
TNFAIP1-202ENST00000544907 MYBBP1AQ9BQG0 1328 aaKnown RBP24.55■■□□□ 1.52
TNFAIP1-202ENST00000544907 CLTCL1P53675 1640 aa24.54■■□□□ 1.52
TNFAIP1-202ENST00000544907 POLR3GLQ9BT43 218 aa24.53■■□□□ 1.52
TNFAIP1-202ENST00000544907 KIAA1210Q9ULL0 1709 aa24.52■■□□□ 1.52
TNFAIP1-202ENST00000544907 EFCAB6Q5THR3 1501 aa24.51■■□□□ 1.51
TNFAIP1-202ENST00000544907 PNISRQ8TF01 805 aaKnown RBP24.51■■□□□ 1.51
TNFAIP1-202ENST00000544907 LRPPRCP42704 1394 aaKnown RBP24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms