RNA–Protein interactions for RNA: ENST00000541025.2

TTR-203, Transcript of transthyretin, humanhuman

TSL 2

Gene TTR, Length 956 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTR-203ENST00000541025 STAC3Q96MF2 364 aa13.33□□□□□ -0.28
TTR-203ENST00000541025 PDIA6Q15084 440 aa13.32□□□□□ -0.28
TTR-203ENST00000541025 VPS9D1Q9Y2B5 631 aa13.32□□□□□ -0.28
TTR-203ENST00000541025 ZBED2Q9BTP6 218 aa13.29□□□□□ -0.28
TTR-203ENST00000541025 PPP1R3GB7ZBB8 358 aa13.25□□□□□ -0.29
TTR-203ENST00000541025 DDX12PQ92771 950 aa13.25□□□□□ -0.29
TTR-203ENST00000541025 BHMG1C9JSJ3 638 aaPredicted RBP13.24□□□□□ -0.29
TTR-203ENST00000541025 C6orf132Q5T0Z8 1188 aa13.24□□□□□ -0.29
TTR-203ENST00000541025 PLCB2Q00722 1185 aa13.21□□□□□ -0.29
TTR-203ENST00000541025 HCSTQ9UBK5 93 aa13.21□□□□□ -0.29
TTR-203ENST00000541025 ONECUT3O60422 494 aaPredicted RBP13.19□□□□□ -0.3
TTR-203ENST00000541025 COL9A1P20849 921 aa13.19□□□□□ -0.3
TTR-203ENST00000541025 RBM33Q96EV2 1170 aaKnown RBP13.18□□□□□ -0.3
TTR-203ENST00000541025 NBPF3Q9H094 633 aa13.18□□□□□ -0.3
TTR-203ENST00000541025 EN1Q05925 392 aaPredicted RBP13.17□□□□□ -0.3
TTR-203ENST00000541025 NBR1Q14596 966 aa13.17□□□□□ -0.3
TTR-203ENST00000541025 MRPL50Q8N5N7 158 aaKnown RBP13.17□□□□□ -0.3
TTR-203ENST00000541025 ARHGEF1Q92888 912 aaKnown RBP13.17□□□□□ -0.3
TTR-203ENST00000541025 RABGEF1Q9UJ41 708 aa13.17□□□□□ -0.3
TTR-203ENST00000541025 KCTD12Q96CX2 325 aaKnown RBP13.15□□□□□ -0.3
TTR-203ENST00000541025 GRXCR2A6NFK2 248 aa13.14□□□□□ -0.31
TTR-203ENST00000541025 GOLGA8CPA6NN73 597 aa13.14□□□□□ -0.31
TTR-203ENST00000541025 MAP3K7O43318 606 aa13.13□□□□□ -0.31
TTR-203ENST00000541025 PROX2Q3B8N5 592 aa13.13□□□□□ -0.31
TTR-203ENST00000541025 OSBPP22059 807 aa13.09□□□□□ -0.31
TTR-203ENST00000541025 CERKQ8TCT0 537 aa13.09□□□□□ -0.31
TTR-203ENST00000541025 KIAA1468Q9P260 1216 aa13.09□□□□□ -0.31
TTR-203ENST00000541025 LAPTM4BQ86VI4 370 aa13.08□□□□□ -0.32
TTR-203ENST00000541025 KCNV2Q8TDN2 545 aa13.08□□□□□ -0.32
TTR-203ENST00000541025 TRIM6-TRIM34B2RNG4 842 aa13.07□□□□□ -0.32
TTR-203ENST00000541025 TSR1Q2NL82 804 aaKnown RBP13.07□□□□□ -0.32
TTR-203ENST00000541025 P3H3Q8IVL6 736 aa13.07□□□□□ -0.32
TTR-203ENST00000541025 WNT2BQ93097 391 aa13.07□□□□□ -0.32
TTR-203ENST00000541025 THSD4Q6ZMP0 1018 aa13.04□□□□□ -0.32
TTR-203ENST00000541025 PRIM1P49642 420 aaKnown RBP13.03□□□□□ -0.32
TTR-203ENST00000541025 PACS2Q86VP3 889 aa13.03□□□□□ -0.32
TTR-203ENST00000541025 PTPN5P54829 565 aa13.02□□□□□ -0.33
TTR-203ENST00000541025 ANKK1Q8NFD2 765 aa13.01□□□□□ -0.33
TTR-203ENST00000541025 PRSS12P56730 875 aa13□□□□□ -0.33
TTR-203ENST00000541025 CDCA7LQ96GN5 454 aa13□□□□□ -0.33
TTR-203ENST00000541025 TSKSQ9UJT2 592 aa12.99□□□□□ -0.33
TTR-203ENST00000541025 FAM98CQ17RN3 349 aaKnown RBP12.98□□□□□ -0.33
TTR-203ENST00000541025 ZFRQ96KR1 1074 aaKnown RBP12.98□□□□□ -0.33
TTR-203ENST00000541025 HAP1P54257 671 aaPredicted RBP12.97□□□□□ -0.33
TTR-203ENST00000541025 PLA2G2EQ9NZK7 142 aa12.97□□□□□ -0.33
TTR-203ENST00000541025 SEPT9Q9UHD8 586 aaPredicted RBP12.96□□□□□ -0.33
TTR-203ENST00000541025 MLLT3P42568 568 aaPredicted RBP12.95□□□□□ -0.34
TTR-203ENST00000541025 RBM27Q9P2N5 1060 aaKnown RBP12.95□□□□□ -0.34
TTR-203ENST00000541025 SOWAHBA6NEL2 793 aa12.94□□□□□ -0.34
TTR-203ENST00000541025 CDHR5Q9HBB8 845 aa12.93□□□□□ -0.34
TTR-203ENST00000541025 NPDC1Q9NQX5 325 aaPredicted RBP12.92□□□□□ -0.34
TTR-203ENST00000541025 FAM198AQ9UFP1 575 aa12.91□□□□□ -0.34
TTR-203ENST00000541025 RB1CC1Q8TDY2 1594 aa12.9□□□□□ -0.35
TTR-203ENST00000541025 NBPF26B4DH59 902 aa12.89□□□□□ -0.35
TTR-203ENST00000541025 TATDN2Q93075 761 aa12.89□□□□□ -0.35
TTR-203ENST00000541025 BCAMP50895 628 aa12.88□□□□□ -0.35
TTR-203ENST00000541025 NYAP1Q6ZVC0 841 aa12.88□□□□□ -0.35
TTR-203ENST00000541025 SEMA3EO15041 775 aa12.87□□□□□ -0.35
TTR-203ENST00000541025 TTC13Q8NBP0 860 aa12.87□□□□□ -0.35
TTR-203ENST00000541025 LRCH3Q96II8 777 aa12.87□□□□□ -0.35
TTR-203ENST00000541025 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.87□□□□□ -0.35
TTR-203ENST00000541025 PNMA3Q9UL41 463 aa12.87□□□□□ -0.35
TTR-203ENST00000541025 NACADO15069 1562 aa12.86□□□□□ -0.35
TTR-203ENST00000541025 IFFO2Q5TF58 517 aa12.85□□□□□ -0.35
TTR-203ENST00000541025 SMAPO00193 183 aa12.84□□□□□ -0.35
TTR-203ENST00000541025 VSIG10Q8N0Z9 540 aa12.84□□□□□ -0.35
TTR-203ENST00000541025 TSR3Q9UJK0 312 aaKnown RBP12.84□□□□□ -0.35
TTR-203ENST00000541025 KDM2AQ9Y2K7 1162 aa12.84□□□□□ -0.35
TTR-203ENST00000541025 SMYD5Q6GMV2 418 aa12.83□□□□□ -0.36
TTR-203ENST00000541025 NUDT18Q6ZVK8 323 aa12.83□□□□□ -0.36
TTR-203ENST00000541025 ZCCHC6Q5VYS8 1495 aaKnown RBP12.83□□□□□ -0.36
TTR-203ENST00000541025 HDGFP51858 240 aaKnown RBP12.82□□□□□ -0.36
TTR-203ENST00000541025 PADI6Q6TGC4 694 aa12.82□□□□□ -0.36
TTR-203ENST00000541025 C3orf80F5H4A9 247 aa12.81□□□□□ -0.36
TTR-203ENST00000541025 PTGDRQ13258 359 aa12.81□□□□□ -0.36
TTR-203ENST00000541025 WBP1LQ9NX94 342 aa12.81□□□□□ -0.36
TTR-203ENST00000541025 NUTM2FA1L443 756 aa12.8□□□□□ -0.36
TTR-203ENST00000541025 TESPA1A2RU30 521 aaPredicted RBP12.8□□□□□ -0.36
TTR-203ENST00000541025 HPS5Q9UPZ3 1129 aa12.8□□□□□ -0.36
TTR-203ENST00000541025 UNC13AQ9UPW8 1703 aa12.79□□□□□ -0.36
TTR-203ENST00000541025 PPP4CP60510 307 aa12.78□□□□□ -0.36
TTR-203ENST00000541025 SAMD7Q7Z3H4 446 aa12.78□□□□□ -0.36
TTR-203ENST00000541025 MYO15BQ96JP2 1530 aa12.76□□□□□ -0.37
TTR-203ENST00000541025 FCHSD2O94868 740 aa12.75□□□□□ -0.37
TTR-203ENST00000541025 ITGBL1O95965 494 aaPredicted RBP12.75□□□□□ -0.37
TTR-203ENST00000541025 EYA1Q99502 592 aa12.75□□□□□ -0.37
TTR-203ENST00000541025 DCAF1Q9Y4B6 1507 aa12.72□□□□□ -0.37
TTR-203ENST00000541025 NECTIN2Q92692 538 aa12.71□□□□□ -0.37
TTR-203ENST00000541025 RBM46Q8TBY0 533 aaKnown RBP12.69□□□□□ -0.38
TTR-203ENST00000541025 SLC4A3P48751 1232 aa12.68□□□□□ -0.38
TTR-203ENST00000541025 KCNC4Q03721 635 aa12.68□□□□□ -0.38
TTR-203ENST00000541025 SWT1Q5T5J6 900 aaKnown RBP12.68□□□□□ -0.38
TTR-203ENST00000541025 RBM26Q5T8P6 1007 aaKnown RBP12.68□□□□□ -0.38
TTR-203ENST00000541025 SLF2Q8IX21 1173 aa12.68□□□□□ -0.38
TTR-203ENST00000541025 ADGRG1Q9Y653 693 aa12.68□□□□□ -0.38
TTR-203ENST00000541025 HIC1Q14526 733 aa12.67□□□□□ -0.38
TTR-203ENST00000541025 A0A0G2JS52 829 aa12.66□□□□□ -0.38
TTR-203ENST00000541025 RGS20O76081 388 aa12.66□□□□□ -0.38
TTR-203ENST00000541025 DNAJB2P25686 324 aa12.65□□□□□ -0.38
TTR-203ENST00000541025 RNF40O75150 1001 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms