RNA–Protein interactions for RNA: ENST00000540838.1

KDM5A-207, Transcript of lysine demethylase 5A, humanhuman

TSL 2

Gene KDM5A, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5A-207ENST00000540838 SPNS2Q8IVW8 549 aa10.23□□□□□ -0.77
KDM5A-207ENST00000540838 OXER1Q8TDS5 423 aa10.23□□□□□ -0.77
KDM5A-207ENST00000540838 MFSD10Q14728 455 aa10.22□□□□□ -0.77
KDM5A-207ENST00000540838 URB2Q14146 1524 aaKnown RBP10.21□□□□□ -0.78
KDM5A-207ENST00000540838 KDM4FA0A1W2PPD8 638 aa10.19□□□□□ -0.78
KDM5A-207ENST00000540838 MAP3K9P80192 1104 aa10.18□□□□□ -0.78
KDM5A-207ENST00000540838 CCDC88BA6NC98 1476 aa10.17□□□□□ -0.78
KDM5A-207ENST00000540838 PSDA5PKW4 1024 aaPredicted RBP10.16□□□□□ -0.78
KDM5A-207ENST00000540838 ANKRD13DQ6ZTN6 518 aa10.16□□□□□ -0.78
KDM5A-207ENST00000540838 EMILIN3Q9NT22 766 aa10.16□□□□□ -0.78
KDM5A-207ENST00000540838 AXIN2Q9Y2T1 843 aa10.16□□□□□ -0.78
KDM5A-207ENST00000540838 MMRN1Q13201 1228 aa10.15□□□□□ -0.78
KDM5A-207ENST00000540838 IFT140Q96RY7 1462 aa10.15□□□□□ -0.78
KDM5A-207ENST00000540838 ABCC8Q09428 1581 aa10.14□□□□□ -0.79
KDM5A-207ENST00000540838 EVI5O60447 810 aa10.14□□□□□ -0.79
KDM5A-207ENST00000540838 PPP4R3BQ5MIZ7 849 aa10.13□□□□□ -0.79
KDM5A-207ENST00000540838 P3H3Q8IVL6 736 aa10.13□□□□□ -0.79
KDM5A-207ENST00000540838 POTEEQ6S8J3 1075 aa10.12□□□□□ -0.79
KDM5A-207ENST00000540838 ZNF454Q8N9F8 522 aa10.12□□□□□ -0.79
KDM5A-207ENST00000540838 PRDM2Q13029 1718 aa10.12□□□□□ -0.79
KDM5A-207ENST00000540838 PBX2P40425 430 aa10.11□□□□□ -0.79
KDM5A-207ENST00000540838 LSM11P83369 360 aaKnown RBP eCLIP10.11□□□□□ -0.79
KDM5A-207ENST00000540838 WDR70Q9NW82 654 aa10.11□□□□□ -0.79
KDM5A-207ENST00000540838 TIMELESSQ9UNS1 1208 aa10.11□□□□□ -0.79
KDM5A-207ENST00000540838 TOPBP1Q92547 1522 aa10.1□□□□□ -0.79
KDM5A-207ENST00000540838 ZNF608Q9ULD9 1512 aaPredicted RBP10.09□□□□□ -0.79
KDM5A-207ENST00000540838 ARHGAP33O14559 1287 aa10.09□□□□□ -0.79
KDM5A-207ENST00000540838 PSEN2P49810 448 aa10.08□□□□□ -0.8
KDM5A-207ENST00000540838 CAMK2BQ13554 666 aa10.08□□□□□ -0.8
KDM5A-207ENST00000540838 ANO8Q9HCE9 1232 aaPredicted RBP10.08□□□□□ -0.8
KDM5A-207ENST00000540838 DPYSL4O14531 572 aa10.07□□□□□ -0.8
KDM5A-207ENST00000540838 KCNV2Q8TDN2 545 aa10.07□□□□□ -0.8
KDM5A-207ENST00000540838 FOSBP53539 338 aa10.05□□□□□ -0.8
KDM5A-207ENST00000540838 KCNH8Q96L42 1107 aa10.05□□□□□ -0.8
KDM5A-207ENST00000540838 KCNK17Q96T54 332 aa10.05□□□□□ -0.8
KDM5A-207ENST00000540838 DNMBPQ6XZF7 1577 aa10.05□□□□□ -0.8
KDM5A-207ENST00000540838 TULP1O00294 542 aaPredicted RBP10.04□□□□□ -0.8
KDM5A-207ENST00000540838 DMRTA1Q5VZB9 504 aa10.04□□□□□ -0.8
KDM5A-207ENST00000540838 MYT1LQ9UL68 1186 aa10.04□□□□□ -0.8
KDM5A-207ENST00000540838 RIMBP3CA6NJZ7 1639 aa10.04□□□□□ -0.8
KDM5A-207ENST00000540838 RIMBP3BA6NNM3 1639 aa10.04□□□□□ -0.8
KDM5A-207ENST00000540838 RIMBP3Q9UFD9 1639 aa10.04□□□□□ -0.8
KDM5A-207ENST00000540838 E2F4Q16254 413 aa10.03□□□□□ -0.8
KDM5A-207ENST00000540838 GTF3C3Q9Y5Q9 886 aa10.03□□□□□ -0.8
KDM5A-207ENST00000540838 ARHGEF11O15085 1522 aa10.02□□□□□ -0.8
KDM5A-207ENST00000540838 TMEM132AQ24JP5 1023 aa10.02□□□□□ -0.81
KDM5A-207ENST00000540838 CYB5RLQ6IPT4 315 aa10.02□□□□□ -0.81
KDM5A-207ENST00000540838 JPH4Q96JJ6 628 aa10.02□□□□□ -0.81
KDM5A-207ENST00000540838 AQRO60306 1485 aaKnown RBP eCLIP10.02□□□□□ -0.81
KDM5A-207ENST00000540838 ZDHHC16Q969W1 377 aa10.01□□□□□ -0.81
KDM5A-207ENST00000540838 RNF166Q96A37 237 aaPredicted RBP10.01□□□□□ -0.81
KDM5A-207ENST00000540838 EIF4G3O43432 1585 aaKnown RBP10.01□□□□□ -0.81
KDM5A-207ENST00000540838 ADGRD1Q6QNK2 874 aa10□□□□□ -0.81
KDM5A-207ENST00000540838 BCL2L12Q9HB09 334 aa10□□□□□ -0.81
KDM5A-207ENST00000540838 TARBP1Q13395 1621 aaKnown RBP10□□□□□ -0.81
KDM5A-207ENST00000540838 POLA1P09884 1462 aaPredicted RBP9.99□□□□□ -0.81
KDM5A-207ENST00000540838 PTPREP23469 700 aa9.99□□□□□ -0.81
KDM5A-207ENST00000540838 PTGER2P43116 358 aa9.99□□□□□ -0.81
KDM5A-207ENST00000540838 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.99□□□□□ -0.81
KDM5A-207ENST00000540838 ADAM33Q9BZ11 813 aa9.99□□□□□ -0.81
KDM5A-207ENST00000540838 PCDHGA10Q9Y5H3 936 aa9.99□□□□□ -0.81
KDM5A-207ENST00000540838 SOGA1O94964 1423 aa9.99□□□□□ -0.81
KDM5A-207ENST00000540838 LMOD2Q6P5Q4 547 aa9.98□□□□□ -0.81
KDM5A-207ENST00000540838 PHF14O94880 888 aa9.96□□□□□ -0.82
KDM5A-207ENST00000540838 DDX12PQ92771 950 aa9.96□□□□□ -0.82
KDM5A-207ENST00000540838 STAC3Q96MF2 364 aa9.96□□□□□ -0.82
KDM5A-207ENST00000540838 TDRD9Q8NDG6 1382 aaKnown RBP9.96□□□□□ -0.82
KDM5A-207ENST00000540838 TK2O00142 265 aa9.95□□□□□ -0.82
KDM5A-207ENST00000540838 TYW1BQ6NUM6 668 aa9.95□□□□□ -0.82
KDM5A-207ENST00000540838 CHMP7Q8WUX9 453 aaPredicted RBP9.95□□□□□ -0.82
KDM5A-207ENST00000540838 RAD54L2Q9Y4B4 1467 aa9.95□□□□□ -0.82
KDM5A-207ENST00000540838 WDR97A6NE52 1622 aa9.93□□□□□ -0.82
KDM5A-207ENST00000540838 SPDYE16A6NNV3 312 aaPredicted RBP9.93□□□□□ -0.82
KDM5A-207ENST00000540838 PDIA6Q15084 440 aa9.93□□□□□ -0.82
KDM5A-207ENST00000540838 RBM33Q96EV2 1170 aaKnown RBP9.93□□□□□ -0.82
KDM5A-207ENST00000540838 CHD1O14646 1710 aa9.93□□□□□ -0.82
KDM5A-207ENST00000540838 FBXW7Q969H0 707 aa9.92□□□□□ -0.82
KDM5A-207ENST00000540838 EPAS1Q99814 870 aa9.92□□□□□ -0.82
KDM5A-207ENST00000540838 ERICH6Q7L0X2 663 aa9.91□□□□□ -0.82
KDM5A-207ENST00000540838 VPS9D1Q9Y2B5 631 aa9.91□□□□□ -0.82
KDM5A-207ENST00000540838 FGD5Q6ZNL6 1462 aa9.91□□□□□ -0.82
KDM5A-207ENST00000540838 ARAP1Q96P48 1450 aa9.91□□□□□ -0.82
KDM5A-207ENST00000540838 HRO43593 1189 aa9.9□□□□□ -0.82
KDM5A-207ENST00000540838 GRIN2BQ13224 1484 aa9.9□□□□□ -0.83
KDM5A-207ENST00000540838 MAGI1Q96QZ7 1491 aaPredicted RBP9.9□□□□□ -0.83
KDM5A-207ENST00000540838 GRXCR2A6NFK2 248 aa9.89□□□□□ -0.83
KDM5A-207ENST00000540838 ARHGEF1Q92888 912 aaKnown RBP9.89□□□□□ -0.83
KDM5A-207ENST00000540838 ZBED2Q9BTP6 218 aa9.89□□□□□ -0.83
KDM5A-207ENST00000540838 SNAPC4Q5SXM2 1469 aa9.89□□□□□ -0.83
KDM5A-207ENST00000540838 C6orf132Q5T0Z8 1188 aa9.88□□□□□ -0.83
KDM5A-207ENST00000540838 CUX1P39880 1505 aa9.87□□□□□ -0.83
KDM5A-207ENST00000540838 SYNJ2O15056 1496 aa9.87□□□□□ -0.83
KDM5A-207ENST00000540838 COL9A1P20849 921 aa9.87□□□□□ -0.83
KDM5A-207ENST00000540838 SLC4A5Q9BY07 1137 aa9.87□□□□□ -0.83
KDM5A-207ENST00000540838 ARIH1Q9Y4X5 557 aaPredicted RBP9.87□□□□□ -0.83
KDM5A-207ENST00000540838 SYNJ1O43426 1573 aa9.87□□□□□ -0.83
KDM5A-207ENST00000540838 PPP1R3GB7ZBB8 358 aa9.86□□□□□ -0.83
KDM5A-207ENST00000540838 MAP3K7O43318 606 aa9.85□□□□□ -0.83
KDM5A-207ENST00000540838 BRPF1P55201 1214 aaPredicted RBP9.85□□□□□ -0.83
KDM5A-207ENST00000540838 CLASP1Q7Z460 1538 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms