RNA–Protein interactions for RNA: ENST00000540182.5

NLRC5-219, Transcript of NLR family CARD domain containing 5, humanhuman

TSL 1 (best)

Gene NLRC5, Length 3,617 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC5-219ENST00000540182 DHX29Q7Z478 1369 aaKnown RBP12.42□□□□□ -0.42
NLRC5-219ENST00000540182 IGHDP01880 384 aa12.41□□□□□ -0.42
NLRC5-219ENST00000540182 PDE3BQ13370 1112 aa12.41□□□□□ -0.42
NLRC5-219ENST00000540182 PTPN23Q9H3S7 1636 aa12.41□□□□□ -0.42
NLRC5-219ENST00000540182 NUP155O75694 1391 aa12.41□□□□□ -0.42
NLRC5-219ENST00000540182 PLEKHG5O94827 1062 aa12.41□□□□□ -0.42
NLRC5-219ENST00000540182 MPNDQ8N594 471 aa12.4□□□□□ -0.42
NLRC5-219ENST00000540182 ANP32BQ92688 251 aaKnown RBP12.39□□□□□ -0.43
NLRC5-219ENST00000540182 FGD5Q6ZNL6 1462 aa12.39□□□□□ -0.43
NLRC5-219ENST00000540182 TRAK2O60296 914 aa12.38□□□□□ -0.43
NLRC5-219ENST00000540182 FOXD4L5Q5VV16 416 aaPredicted RBP12.38□□□□□ -0.43
NLRC5-219ENST00000540182 FOXD4L4Q8WXT5 416 aaPredicted RBP12.38□□□□□ -0.43
NLRC5-219ENST00000540182 HSP90AB1P08238 724 aaKnown RBP12.37□□□□□ -0.43
NLRC5-219ENST00000540182 TNNQ9UQP3 1299 aa12.37□□□□□ -0.43
NLRC5-219ENST00000540182 TSPY4P0CV99 314 aa12.37□□□□□ -0.43
NLRC5-219ENST00000540182 TSPY10P0CW01 314 aa12.37□□□□□ -0.43
NLRC5-219ENST00000540182 PODXL2Q9NZ53 605 aa12.37□□□□□ -0.43
NLRC5-219ENST00000540182 BRD4O60885 1362 aaPredicted RBP12.36□□□□□ -0.43
NLRC5-219ENST00000540182 CASKIN1Q8WXD9 1431 aa12.36□□□□□ -0.43
NLRC5-219ENST00000540182 ANKRD30BQ9BXX2 1392 aa12.36□□□□□ -0.43
NLRC5-219ENST00000540182 PRDM10Q9NQV6 1147 aa12.36□□□□□ -0.43
NLRC5-219ENST00000540182 CC2D2AQ9P2K1 1620 aa12.36□□□□□ -0.43
NLRC5-219ENST00000540182 FTSJ3Q8IY81 847 aaKnown RBP12.35□□□□□ -0.43
NLRC5-219ENST00000540182 TBC1D2Q9BYX2 928 aa12.35□□□□□ -0.43
NLRC5-219ENST00000540182 HSCBQ8IWL3 235 aa12.35□□□□□ -0.43
NLRC5-219ENST00000540182 SPINK5Q9NQ38 1064 aaPredicted RBP12.35□□□□□ -0.43
NLRC5-219ENST00000540182 FOXD4L6Q3SYB3 417 aaPredicted RBP12.34□□□□□ -0.43
NLRC5-219ENST00000540182 FOXD4L3Q6VB84 417 aaPredicted RBP12.34□□□□□ -0.43
NLRC5-219ENST00000540182 ESPNB1AK53 854 aa12.33□□□□□ -0.44
NLRC5-219ENST00000540182 CHGAP10645 457 aaKnown RBP12.33□□□□□ -0.44
NLRC5-219ENST00000540182 MCM4P33991 863 aa12.33□□□□□ -0.44
NLRC5-219ENST00000540182 DNTTIP2Q5QJE6 756 aaKnown RBP12.33□□□□□ -0.44
NLRC5-219ENST00000540182 BCL11BQ9C0K0 894 aaPredicted RBP12.33□□□□□ -0.44
NLRC5-219ENST00000540182 MSNP26038 577 aaKnown RBP12.32□□□□□ -0.44
NLRC5-219ENST00000540182 HNRNPMP52272 730 aaKnown RBP eCLIP12.32□□□□□ -0.44
NLRC5-219ENST00000540182 TMF1P82094 1093 aa12.32□□□□□ -0.44
NLRC5-219ENST00000540182 R3HCC1Q9Y3T6 440 aaKnown RBP12.32□□□□□ -0.44
NLRC5-219ENST00000540182 APBB1O00213 710 aa12.31□□□□□ -0.44
NLRC5-219ENST00000540182 DUSP27Q5VZP5 1158 aa12.31□□□□□ -0.44
NLRC5-219ENST00000540182 KIAA1211Q6ZU35 1233 aa12.31□□□□□ -0.44
NLRC5-219ENST00000540182 CENPJQ9HC77 1338 aaPredicted RBP12.31□□□□□ -0.44
NLRC5-219ENST00000540182 KDM6BO15054 1643 aa12.31□□□□□ -0.44
NLRC5-219ENST00000540182 PDZRN3Q9UPQ7 1066 aa12.31□□□□□ -0.44
NLRC5-219ENST00000540182 GRPEL1Q9HAV7 217 aa12.3□□□□□ -0.44
NLRC5-219ENST00000540182 FYCO1Q9BQS8 1478 aa12.3□□□□□ -0.44
NLRC5-219ENST00000540182 PLCB2Q00722 1185 aa12.3□□□□□ -0.44
NLRC5-219ENST00000540182 DMRT2Q9Y5R5 561 aa12.3□□□□□ -0.44
NLRC5-219ENST00000540182 ITPRIPQ8IWB1 547 aa12.28□□□□□ -0.44
NLRC5-219ENST00000540182 C22orf23Q9BZE7 217 aa12.28□□□□□ -0.44
NLRC5-219ENST00000540182 PTMAP06454 111 aaKnown RBP12.28□□□□□ -0.44
NLRC5-219ENST00000540182 ZHX1Q9UKY1 873 aaPredicted RBP12.28□□□□□ -0.44
NLRC5-219ENST00000540182 PLEKHH1Q9ULM0 1364 aa12.27□□□□□ -0.45
NLRC5-219ENST00000540182 KDM2BQ8NHM5 1336 aa12.27□□□□□ -0.45
NLRC5-219ENST00000540182 PPP2R1AP30153 589 aa12.27□□□□□ -0.45
NLRC5-219ENST00000540182 KDM5BQ9UGL1 1544 aa12.27□□□□□ -0.45
NLRC5-219ENST00000540182 RPRD2Q5VT52 1461 aaKnown RBP12.26□□□□□ -0.45
NLRC5-219ENST00000540182 RRP9O43818 475 aaKnown RBP12.26□□□□□ -0.45
NLRC5-219ENST00000540182 CDK13Q14004 1512 aaKnown RBP12.26□□□□□ -0.45
NLRC5-219ENST00000540182 NOL8Q76FK4 1167 aaKnown RBP12.26□□□□□ -0.45
NLRC5-219ENST00000540182 DDX49Q9Y6V7 483 aaKnown RBP12.26□□□□□ -0.45
NLRC5-219ENST00000540182 LNPKQ9C0E8 428 aa12.26□□□□□ -0.45
NLRC5-219ENST00000540182 CHMP5Q9NZZ3 219 aa12.26□□□□□ -0.45
NLRC5-219ENST00000540182 MRE11P49959 708 aa12.25□□□□□ -0.45
NLRC5-219ENST00000540182 RNF214Q8ND24 703 aa12.25□□□□□ -0.45
NLRC5-219ENST00000540182 U2SURPO15042 1029 aaKnown RBP12.25□□□□□ -0.45
NLRC5-219ENST00000540182 MAPK8IP2Q13387 824 aaPredicted RBP12.24□□□□□ -0.45
NLRC5-219ENST00000540182 ERBB4Q15303 1308 aa12.24□□□□□ -0.45
NLRC5-219ENST00000540182 SAFB2Q14151 953 aaKnown RBP eCLIP12.24□□□□□ -0.45
NLRC5-219ENST00000540182 PCDHB15Q9Y5E8 787 aa12.24□□□□□ -0.45
NLRC5-219ENST00000540182 CLCN1P35523 988 aa12.23□□□□□ -0.45
NLRC5-219ENST00000540182 XPCQ01831 940 aaPredicted RBP12.23□□□□□ -0.45
NLRC5-219ENST00000540182 DENND4BO75064 1496 aaPredicted RBP12.23□□□□□ -0.45
NLRC5-219ENST00000540182 SPATA31E1Q6ZUB1 1445 aa12.23□□□□□ -0.45
NLRC5-219ENST00000540182 MAPK8IP3Q9UPT6 1336 aa12.23□□□□□ -0.45
NLRC5-219ENST00000540182 LRPPRCP42704 1394 aaKnown RBP12.22□□□□□ -0.45
NLRC5-219ENST00000540182 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.22□□□□□ -0.45
NLRC5-219ENST00000540182 ELL2O00472 640 aaPredicted RBP12.22□□□□□ -0.45
NLRC5-219ENST00000540182 RWDD1Q9H446 243 aaPredicted RBP12.22□□□□□ -0.45
NLRC5-219ENST00000540182 GOLGA6L22H0YM25 854 aa12.22□□□□□ -0.45
NLRC5-219ENST00000540182 SLFN5Q08AF3 891 aa12.22□□□□□ -0.45
NLRC5-219ENST00000540182 RLBP1P12271 317 aa12.21□□□□□ -0.45
NLRC5-219ENST00000540182 NASPP49321 788 aaPredicted RBP12.21□□□□□ -0.45
NLRC5-219ENST00000540182 TSR2Q969E8 191 aaKnown RBP12.21□□□□□ -0.45
NLRC5-219ENST00000540182 SMC4Q9NTJ3 1288 aa12.21□□□□□ -0.46
NLRC5-219ENST00000540182 DISP3Q9P2K9 1392 aa12.2□□□□□ -0.46
NLRC5-219ENST00000540182 GAS2L3Q86XJ1 694 aa12.2□□□□□ -0.46
NLRC5-219ENST00000540182 GBP4Q96PP9 640 aa12.2□□□□□ -0.46
NLRC5-219ENST00000540182 FAM177BA6PVY3 158 aa12.2□□□□□ -0.46
NLRC5-219ENST00000540182 USP19O94966 1318 aa12.2□□□□□ -0.46
NLRC5-219ENST00000540182 CGNL1Q0VF96 1302 aa12.2□□□□□ -0.46
NLRC5-219ENST00000540182 CAVIN1Q6NZI2 390 aaKnown RBP12.2□□□□□ -0.46
NLRC5-219ENST00000540182 RBM42Q9BTD8 480 aaKnown RBP12.2□□□□□ -0.46
NLRC5-219ENST00000540182 C1orf115Q9H7X2 142 aa12.2□□□□□ -0.46
NLRC5-219ENST00000540182 MIA2Q96PC5 1412 aa12.19□□□□□ -0.46
NLRC5-219ENST00000540182 PDS5BQ9NTI5 1447 aa12.19□□□□□ -0.46
NLRC5-219ENST00000540182 CADPSQ9ULU8 1353 aa12.19□□□□□ -0.46
NLRC5-219ENST00000540182 U2AF1L5P0DN76 240 aaPredicted RBP12.19□□□□□ -0.46
NLRC5-219ENST00000540182 U2AF1Q01081 240 aaKnown RBP eCLIP12.19□□□□□ -0.46
NLRC5-219ENST00000540182 MCTP1Q6DN14 999 aa12.19□□□□□ -0.46
NLRC5-219ENST00000540182 PMFBP1Q8TBY8 1022 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms