RNA–Protein interactions for RNA: ENST00000540013.5

MRE11-209, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 1 (best) BASIC

Gene MRE11, Length 1,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-209ENST00000540013 PCDHGA10Q9Y5H3 936 aa11.41□□□□□ -0.58
MRE11-209ENST00000540013 OSBPP22059 807 aa11.4□□□□□ -0.58
MRE11-209ENST00000540013 LMOD2Q6P5Q4 547 aa11.4□□□□□ -0.58
MRE11-209ENST00000540013 EN1Q05925 392 aaPredicted RBP11.39□□□□□ -0.59
MRE11-209ENST00000540013 KCNH8Q96L42 1107 aa11.38□□□□□ -0.59
MRE11-209ENST00000540013 MAP3K7O43318 606 aa11.36□□□□□ -0.59
MRE11-209ENST00000540013 VARS2Q5ST30 1063 aaKnown RBP11.35□□□□□ -0.59
MRE11-209ENST00000540013 MYT1LQ9UL68 1186 aa11.35□□□□□ -0.59
MRE11-209ENST00000540013 GPIHBP1Q8IV16 184 aa11.34□□□□□ -0.59
MRE11-209ENST00000540013 BCL2L12Q9HB09 334 aa11.34□□□□□ -0.59
MRE11-209ENST00000540013 RBM26Q5T8P6 1007 aaKnown RBP11.33□□□□□ -0.6
MRE11-209ENST00000540013 CERKQ8TCT0 537 aa11.33□□□□□ -0.6
MRE11-209ENST00000540013 NUTM2FA1L443 756 aa11.32□□□□□ -0.6
MRE11-209ENST00000540013 RBM33Q96EV2 1170 aaKnown RBP11.32□□□□□ -0.6
MRE11-209ENST00000540013 TIMELESSQ9UNS1 1208 aa11.32□□□□□ -0.6
MRE11-209ENST00000540013 PTPREP23469 700 aa11.31□□□□□ -0.6
MRE11-209ENST00000540013 PBX2P40425 430 aa11.31□□□□□ -0.6
MRE11-209ENST00000540013 ADAM33Q9BZ11 813 aa11.31□□□□□ -0.6
MRE11-209ENST00000540013 C6orf132Q5T0Z8 1188 aa11.3□□□□□ -0.6
MRE11-209ENST00000540013 FCHSD2O94868 740 aa11.29□□□□□ -0.6
MRE11-209ENST00000540013 ZNF687Q8N1G0 1237 aa11.29□□□□□ -0.6
MRE11-209ENST00000540013 PRIM1P49642 420 aaKnown RBP11.26□□□□□ -0.61
MRE11-209ENST00000540013 HIC1Q14526 733 aa11.26□□□□□ -0.61
MRE11-209ENST00000540013 PPP1R3GB7ZBB8 358 aa11.25□□□□□ -0.61
MRE11-209ENST00000540013 ARHGAP33O14559 1287 aa11.25□□□□□ -0.61
MRE11-209ENST00000540013 TSR1Q2NL82 804 aaKnown RBP11.25□□□□□ -0.61
MRE11-209ENST00000540013 PTGDRQ13258 359 aa11.24□□□□□ -0.61
MRE11-209ENST00000540013 ZC3H15Q8WU90 426 aaKnown RBP11.23□□□□□ -0.61
MRE11-209ENST00000540013 KCNK17Q96T54 332 aa11.23□□□□□ -0.61
MRE11-209ENST00000540013 RBM27Q9P2N5 1060 aaKnown RBP11.23□□□□□ -0.61
MRE11-209ENST00000540013 GNPATO15228 680 aa11.21□□□□□ -0.61
MRE11-209ENST00000540013 CDHR5Q9HBB8 845 aa11.21□□□□□ -0.61
MRE11-209ENST00000540013 ERICH6Q7L0X2 663 aa11.19□□□□□ -0.62
MRE11-209ENST00000540013 NPDC1Q9NQX5 325 aaPredicted RBP11.19□□□□□ -0.62
MRE11-209ENST00000540013 GPR37O15354 613 aa11.18□□□□□ -0.62
MRE11-209ENST00000540013 ZMYND10O75800 440 aa11.18□□□□□ -0.62
MRE11-209ENST00000540013 ONECUT3O60422 494 aaPredicted RBP11.17□□□□□ -0.62
MRE11-209ENST00000540013 PRSS12P56730 875 aa11.17□□□□□ -0.62
MRE11-209ENST00000540013 SLC4A5Q9BY07 1137 aa11.17□□□□□ -0.62
MRE11-209ENST00000540013 COL9A1P20849 921 aa11.16□□□□□ -0.62
MRE11-209ENST00000540013 BARGINQ6ZT62 677 aa11.16□□□□□ -0.62
MRE11-209ENST00000540013 PSEN2P49810 448 aa11.15□□□□□ -0.62
MRE11-209ENST00000540013 CDCA7LQ96GN5 454 aa11.15□□□□□ -0.62
MRE11-209ENST00000540013 MAP2K5Q13163 448 aa11.14□□□□□ -0.63
MRE11-209ENST00000540013 KRI1Q8N9T8 703 aaKnown RBP11.14□□□□□ -0.63
MRE11-209ENST00000540013 MINK1Q8N4C8 1332 aaPredicted RBP11.13□□□□□ -0.63
MRE11-209ENST00000540013 TK2O00142 265 aa11.13□□□□□ -0.63
MRE11-209ENST00000540013 PACS2Q86VP3 889 aa11.13□□□□□ -0.63
MRE11-209ENST00000540013 ZBED2Q9BTP6 218 aa11.13□□□□□ -0.63
MRE11-209ENST00000540013 AXIN2Q9Y2T1 843 aa11.13□□□□□ -0.63
MRE11-209ENST00000540013 TRIM6-TRIM34B2RNG4 842 aa11.12□□□□□ -0.63
MRE11-209ENST00000540013 LSM11P83369 360 aaKnown RBP eCLIP11.12□□□□□ -0.63
MRE11-209ENST00000540013 POTEEQ6S8J3 1075 aa11.12□□□□□ -0.63
MRE11-209ENST00000540013 PADI6Q6TGC4 694 aa11.11□□□□□ -0.63
MRE11-209ENST00000540013 NBPF26B4DH59 902 aa11.1□□□□□ -0.63
MRE11-209ENST00000540013 HOMEZQ8IX15 550 aa11.1□□□□□ -0.63
MRE11-209ENST00000540013 TTC13Q8NBP0 860 aa11.1□□□□□ -0.63
MRE11-209ENST00000540013 OATP04181 439 aa11.09□□□□□ -0.63
MRE11-209ENST00000540013 DMRTA1Q5VZB9 504 aa11.09□□□□□ -0.63
MRE11-209ENST00000540013 RABGEF1Q9UJ41 708 aa11.09□□□□□ -0.63
MRE11-209ENST00000540013 GTF3C3Q9Y5Q9 886 aa11.09□□□□□ -0.63
MRE11-209ENST00000540013 NBPF3Q9H094 633 aa11.07□□□□□ -0.64
MRE11-209ENST00000540013 VPS9D1Q9Y2B5 631 aa11.07□□□□□ -0.64
MRE11-209ENST00000540013 IRF6O14896 467 aa11.06□□□□□ -0.64
MRE11-209ENST00000540013 PROX2Q3B8N5 592 aa11.06□□□□□ -0.64
MRE11-209ENST00000540013 RBM46Q8TBY0 533 aaKnown RBP11.06□□□□□ -0.64
MRE11-209ENST00000540013 AK7Q96M32 723 aa11.06□□□□□ -0.64
MRE11-209ENST00000540013 TSKSQ9UJT2 592 aa11.06□□□□□ -0.64
MRE11-209ENST00000540013 FECHP22830 423 aa11.05□□□□□ -0.64
MRE11-209ENST00000540013 ADGRD1Q6QNK2 874 aa11.05□□□□□ -0.64
MRE11-209ENST00000540013 PLA2G2EQ9NZK7 142 aa11.05□□□□□ -0.64
MRE11-209ENST00000540013 ANKRD13DQ6ZTN6 518 aa11.04□□□□□ -0.64
MRE11-209ENST00000540013 STAC3Q96MF2 364 aa11.04□□□□□ -0.64
MRE11-209ENST00000540013 KIAA1468Q9P260 1216 aa11.04□□□□□ -0.64
MRE11-209ENST00000540013 ADGRG1Q9Y653 693 aa11.03□□□□□ -0.64
MRE11-209ENST00000540013 LAPTM4BQ86VI4 370 aa11.02□□□□□ -0.65
MRE11-209ENST00000540013 TATDN2Q93075 761 aa11.02□□□□□ -0.65
MRE11-209ENST00000540013 CCDC102AQ96A19 550 aa11.02□□□□□ -0.65
MRE11-209ENST00000540013 SLC24A3Q9HC58 644 aa11.02□□□□□ -0.65
MRE11-209ENST00000540013 PNMA3Q9UL41 463 aa11.02□□□□□ -0.65
MRE11-209ENST00000540013 NUDT18Q6ZVK8 323 aa11□□□□□ -0.65
MRE11-209ENST00000540013 FAM198AQ9UFP1 575 aa11□□□□□ -0.65
MRE11-209ENST00000540013 METTL3Q86U44 580 aaKnown RBP10.99□□□□□ -0.65
MRE11-209ENST00000540013 MRPL50Q8N5N7 158 aaKnown RBP10.99□□□□□ -0.65
MRE11-209ENST00000540013 PXYLP1Q8TE99 480 aa10.99□□□□□ -0.65
MRE11-209ENST00000540013 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.98□□□□□ -0.65
MRE11-209ENST00000540013 FAM98CQ17RN3 349 aaKnown RBP10.98□□□□□ -0.65
MRE11-209ENST00000540013 BHMG1C9JSJ3 638 aaPredicted RBP10.97□□□□□ -0.65
MRE11-209ENST00000540013 HRO43593 1189 aa10.97□□□□□ -0.65
MRE11-209ENST00000540013 HDGFP51858 240 aaKnown RBP10.97□□□□□ -0.65
MRE11-209ENST00000540013 EYA1Q99502 592 aa10.97□□□□□ -0.65
MRE11-209ENST00000540013 DNAJB2P25686 324 aa10.96□□□□□ -0.65
MRE11-209ENST00000540013 GOLGA8CPA6NN73 597 aa10.95□□□□□ -0.66
MRE11-209ENST00000540013 SLC4A3P48751 1232 aa10.95□□□□□ -0.66
MRE11-209ENST00000540013 AMHR2Q16671 573 aa10.95□□□□□ -0.66
MRE11-209ENST00000540013 TRIM66O15016 1216 aa10.94□□□□□ -0.66
MRE11-209ENST00000540013 FAM161AQ3B820 660 aa10.94□□□□□ -0.66
MRE11-209ENST00000540013 CLCN1P35523 988 aa10.93□□□□□ -0.66
MRE11-209ENST00000540013 SEPT9Q9UHD8 586 aaPredicted RBP10.93□□□□□ -0.66
MRE11-209ENST00000540013 RCCD1A6NED2 376 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms