RNA–Protein interactions for RNA: ENST00000539442.1

LEMD3-202, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 932 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-202ENST00000539442 KIF15Q9NS87 1388 aa15.86■□□□□ 0.13
LEMD3-202ENST00000539442 ATP7AQ04656 1500 aa15.85■□□□□ 0.13
LEMD3-202ENST00000539442 MLH3Q9UHC1 1453 aa15.84■□□□□ 0.13
LEMD3-202ENST00000539442 TRHP20396 242 aaPredicted RBP15.84■□□□□ 0.13
LEMD3-202ENST00000539442 ANKRD50Q9ULJ7 1429 aa15.83■□□□□ 0.12
LEMD3-202ENST00000539442 HECW2Q9P2P5 1572 aa15.83■□□□□ 0.12
LEMD3-202ENST00000539442 RICTORQ6R327 1708 aa15.82■□□□□ 0.12
LEMD3-202ENST00000539442 ZMYM4Q5VZL5 1548 aa15.82■□□□□ 0.12
LEMD3-202ENST00000539442 DUOX2Q9NRD8 1548 aa15.82■□□□□ 0.12
LEMD3-202ENST00000539442 FRMPD1Q5SYB0 1578 aa15.81■□□□□ 0.12
LEMD3-202ENST00000539442 ERBINQ96RT1 1412 aa15.8■□□□□ 0.12
LEMD3-202ENST00000539442 MAGI2Q86UL8 1455 aa15.79■□□□□ 0.12
LEMD3-202ENST00000539442 ABCB7O75027 752 aa15.79■□□□□ 0.12
LEMD3-202ENST00000539442 RAPGEF3O95398 923 aa15.79■□□□□ 0.12
LEMD3-202ENST00000539442 KIDINS220Q9ULH0 1771 aa15.79■□□□□ 0.12
LEMD3-202ENST00000539442 KDM6BO15054 1643 aa15.78■□□□□ 0.12
LEMD3-202ENST00000539442 MYT1LQ9UL68 1186 aa15.77■□□□□ 0.12
LEMD3-202ENST00000539442 ZNF219Q9P2Y4 722 aaPredicted RBP15.76■□□□□ 0.11
LEMD3-202ENST00000539442 DHX57Q6P158 1386 aaKnown RBP15.75■□□□□ 0.11
LEMD3-202ENST00000539442 COL17A1Q9UMD9 1497 aaPredicted RBP15.75■□□□□ 0.11
LEMD3-202ENST00000539442 DHX29Q7Z478 1369 aaKnown RBP15.75■□□□□ 0.11
LEMD3-202ENST00000539442 A2MP01023 1474 aa15.73■□□□□ 0.11
LEMD3-202ENST00000539442 ABCA6Q8N139 1617 aa15.73■□□□□ 0.11
LEMD3-202ENST00000539442 CCER1Q8TC90 406 aaPredicted RBP15.73■□□□□ 0.11
LEMD3-202ENST00000539442 DIP2CQ9Y2E4 1556 aa15.73■□□□□ 0.11
LEMD3-202ENST00000539442 EIF2AK4Q9P2K8 1649 aaKnown RBP15.72■□□□□ 0.11
LEMD3-202ENST00000539442 KDM5DQ9BY66 1539 aa15.72■□□□□ 0.11
LEMD3-202ENST00000539442 CLSPNQ9HAW4 1339 aa15.71■□□□□ 0.11
LEMD3-202ENST00000539442 UNC13BO14795 1591 aa15.7■□□□□ 0.1
LEMD3-202ENST00000539442 YEATS2Q9ULM3 1422 aa15.7■□□□□ 0.1
LEMD3-202ENST00000539442 TRIM52Q96A61 297 aa15.7■□□□□ 0.1
LEMD3-202ENST00000539442 REREQ9P2R6 1566 aa15.69■□□□□ 0.1
LEMD3-202ENST00000539442 ARHGEF40Q8TER5 1519 aa15.68■□□□□ 0.1
LEMD3-202ENST00000539442 BCORL1Q5H9F3 1711 aa15.68■□□□□ 0.1
LEMD3-202ENST00000539442 ATP10AO60312 1499 aa15.67■□□□□ 0.1
LEMD3-202ENST00000539442 NUP155O75694 1391 aa15.66■□□□□ 0.1
LEMD3-202ENST00000539442 DEPDC5O75140 1603 aa15.66■□□□□ 0.1
LEMD3-202ENST00000539442 PZPP20742 1482 aa15.65■□□□□ 0.1
LEMD3-202ENST00000539442 MPHOSPH9Q99550 1183 aa15.65■□□□□ 0.1
LEMD3-202ENST00000539442 RNF17Q9BXT8 1623 aaKnown RBP15.65■□□□□ 0.1
LEMD3-202ENST00000539442 PRDM15P57071 1507 aaPredicted RBP15.64■□□□□ 0.09
LEMD3-202ENST00000539442 AGLP35573 1532 aa15.63■□□□□ 0.09
LEMD3-202ENST00000539442 FAM135AQ9P2D6 1515 aa15.63■□□□□ 0.09
LEMD3-202ENST00000539442 KIF3BO15066 747 aa15.63■□□□□ 0.09
LEMD3-202ENST00000539442 SLC4A1APQ9BWU0 796 aaKnown RBP15.63■□□□□ 0.09
LEMD3-202ENST00000539442 IQGAP3Q86VI3 1631 aa15.63■□□□□ 0.09
LEMD3-202ENST00000539442 KANK1Q14678 1352 aa15.62■□□□□ 0.09
LEMD3-202ENST00000539442 VWDEQ8N2E2 1590 aa15.62■□□□□ 0.09
LEMD3-202ENST00000539442 ZEB1P37275 1124 aaPredicted RBP15.61■□□□□ 0.09
LEMD3-202ENST00000539442 MROH1Q8NDA8 1641 aa15.61■□□□□ 0.09
LEMD3-202ENST00000539442 LMTK2Q8IWU2 1503 aa15.58■□□□□ 0.08
LEMD3-202ENST00000539442 PKD2Q13563 968 aa15.56■□□□□ 0.08
LEMD3-202ENST00000539442 TET3O43151 1660 aa15.54■□□□□ 0.08
LEMD3-202ENST00000539442 GGT6Q6P531 493 aa15.54■□□□□ 0.08
LEMD3-202ENST00000539442 ANKRD30BQ9BXX2 1392 aa15.53■□□□□ 0.08
LEMD3-202ENST00000539442 ZC3H13Q5T200 1668 aaKnown RBP15.53■□□□□ 0.08
LEMD3-202ENST00000539442 ABCC3O15438 1527 aa15.52■□□□□ 0.07
LEMD3-202ENST00000539442 SIGLEC1Q9BZZ2 1709 aa15.51■□□□□ 0.07
LEMD3-202ENST00000539442 EFCAB6Q5THR3 1501 aa15.51■□□□□ 0.07
LEMD3-202ENST00000539442 WASHC2CQ9Y4E1 1318 aa15.5■□□□□ 0.07
LEMD3-202ENST00000539442 RPRD2Q5VT52 1461 aaKnown RBP15.5■□□□□ 0.07
LEMD3-202ENST00000539442 NPM3O75607 178 aaKnown RBP15.49■□□□□ 0.07
LEMD3-202ENST00000539442 TIMELESSQ9UNS1 1208 aa15.48■□□□□ 0.07
LEMD3-202ENST00000539442 ARHGAP31Q2M1Z3 1444 aa15.48■□□□□ 0.07
LEMD3-202ENST00000539442 CEP152O94986 1710 aa15.48■□□□□ 0.07
LEMD3-202ENST00000539442 E9PCH4 1651 aa15.48■□□□□ 0.07
LEMD3-202ENST00000539442 ARID4BQ4LE39 1312 aaPredicted RBP15.46■□□□□ 0.07
LEMD3-202ENST00000539442 PTPRTO14522 1441 aa15.46■□□□□ 0.07
LEMD3-202ENST00000539442 SIN3AQ96ST3 1273 aa15.46■□□□□ 0.07
LEMD3-202ENST00000539442 CAMSAP1Q5T5Y3 1602 aa15.46■□□□□ 0.06
LEMD3-202ENST00000539442 NPATQ14207 1427 aa15.45■□□□□ 0.06
LEMD3-202ENST00000539442 TRPM2O94759 1503 aa15.44■□□□□ 0.06
LEMD3-202ENST00000539442 PLA2R1Q13018 1463 aa15.44■□□□□ 0.06
LEMD3-202ENST00000539442 CCDC144AA2RUR9 1427 aa15.43■□□□□ 0.06
LEMD3-202ENST00000539442 CNTLNQ9NXG0 1405 aa15.43■□□□□ 0.06
LEMD3-202ENST00000539442 HAX1O00165 279 aa15.43■□□□□ 0.06
LEMD3-202ENST00000539442 NEUROD1Q13562 356 aa15.43■□□□□ 0.06
LEMD3-202ENST00000539442 TONSLQ96HA7 1378 aa15.42■□□□□ 0.06
LEMD3-202ENST00000539442 MLECQ14165 292 aa15.42■□□□□ 0.06
LEMD3-202ENST00000539442 SPHKAPQ2M3C7 1700 aa15.42■□□□□ 0.06
LEMD3-202ENST00000539442 ESF1Q9H501 851 aaKnown RBP15.41■□□□□ 0.06
LEMD3-202ENST00000539442 NOS1P29475 1434 aa15.4■□□□□ 0.06
LEMD3-202ENST00000539442 CLTCQ00610 1675 aaKnown RBP15.39■□□□□ 0.05
LEMD3-202ENST00000539442 MROH2AA6NES4 1674 aa15.38■□□□□ 0.05
LEMD3-202ENST00000539442 NEURL4Q96JN8 1562 aa15.36■□□□□ 0.05
LEMD3-202ENST00000539442 ZMYM3Q14202 1370 aa15.36■□□□□ 0.05
LEMD3-202ENST00000539442 ERVK-7P63135 1459 aa15.35■□□□□ 0.05
LEMD3-202ENST00000539442 CLTCL1P53675 1640 aa15.35■□□□□ 0.05
LEMD3-202ENST00000539442 SPATA31D1Q6ZQQ2 1576 aa15.34■□□□□ 0.05
LEMD3-202ENST00000539442 PREX1Q8TCU6 1659 aa15.34■□□□□ 0.05
LEMD3-202ENST00000539442 SYNMO15061 1565 aa15.33■□□□□ 0.05
LEMD3-202ENST00000539442 FER1L4A9Z1Z3 1794 aa15.33■□□□□ 0.04
LEMD3-202ENST00000539442 SLC52A1Q9NWF4 448 aa15.32■□□□□ 0.04
LEMD3-202ENST00000539442 SPATA31E1Q6ZUB1 1445 aa15.32■□□□□ 0.04
LEMD3-202ENST00000539442 PIK3C2BO00750 1634 aa15.32■□□□□ 0.04
LEMD3-202ENST00000539442 PPP1R15AO75807 674 aaPredicted RBP15.31■□□□□ 0.04
LEMD3-202ENST00000539442 L3MBTL2Q969R5 705 aa15.31■□□□□ 0.04
LEMD3-202ENST00000539442 ADAMTSL3P82987 1691 aa15.3■□□□□ 0.04
LEMD3-202ENST00000539442 UGGT1Q9NYU2 1555 aa15.3■□□□□ 0.04
LEMD3-202ENST00000539442 ADGRB3O60242 1522 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms