RNA–Protein interactions for RNA: ENST00000539148.3

CLPB-210, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-210ENST00000539148 FAM135AQ9P2D6 1515 aa15.14■□□□□ 0.01
CLPB-210ENST00000539148 ZEB1P37275 1124 aaPredicted RBP15.14■□□□□ 0.01
CLPB-210ENST00000539148 ARID4BQ4LE39 1312 aaPredicted RBP15.14■□□□□ 0.01
CLPB-210ENST00000539148 KIF3BO15066 747 aa15.13■□□□□ 0.01
CLPB-210ENST00000539148 RNF17Q9BXT8 1623 aaKnown RBP15.13■□□□□ 0.01
CLPB-210ENST00000539148 RAB3GAP2Q9H2M9 1393 aa15.12■□□□□ 0.01
CLPB-210ENST00000539148 ESF1Q9H501 851 aaKnown RBP15.12■□□□□ 0.01
CLPB-210ENST00000539148 DEPDC5O75140 1603 aa15.12■□□□□ 0.01
CLPB-210ENST00000539148 UNC13BO14795 1591 aa15.11■□□□□ 0.01
CLPB-210ENST00000539148 TRIM52Q96A61 297 aa15.11■□□□□ 0.01
CLPB-210ENST00000539148 ZC3H13Q5T200 1668 aaKnown RBP15.11■□□□□ 0.01
CLPB-210ENST00000539148 PRDM15P57071 1507 aaPredicted RBP15.08■□□□□ 0.01
CLPB-210ENST00000539148 KDM5DQ9BY66 1539 aa15.08■□□□□ 0.01
CLPB-210ENST00000539148 GGT6Q6P531 493 aa15.07■□□□□ 0
CLPB-210ENST00000539148 IQGAP3Q86VI3 1631 aa15.06■□□□□ 0
CLPB-210ENST00000539148 NUP155O75694 1391 aa15.06■□□□□ 0
CLPB-210ENST00000539148 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.05■□□□□ -0
CLPB-210ENST00000539148 WASHC2CQ9Y4E1 1318 aa15.05■□□□□ -0
CLPB-210ENST00000539148 CNTLNQ9NXG0 1405 aa15.05■□□□□ -0
CLPB-210ENST00000539148 FER1L4A9Z1Z3 1794 aa15.03■□□□□ -0
CLPB-210ENST00000539148 TET3O43151 1660 aa15.03■□□□□ -0
CLPB-210ENST00000539148 SLC4A1APQ9BWU0 796 aaKnown RBP15.02■□□□□ -0
CLPB-210ENST00000539148 MROH2AA6NES4 1674 aa15.02□□□□□ -0.01
CLPB-210ENST00000539148 CEP152O94986 1710 aa15.01□□□□□ -0.01
CLPB-210ENST00000539148 MROH1Q8NDA8 1641 aa15.01□□□□□ -0.01
CLPB-210ENST00000539148 VWDEQ8N2E2 1590 aa15.01□□□□□ -0.01
CLPB-210ENST00000539148 LMTK2Q8IWU2 1503 aa15.01□□□□□ -0.01
CLPB-210ENST00000539148 MLECQ14165 292 aa15□□□□□ -0.01
CLPB-210ENST00000539148 SIGLEC1Q9BZZ2 1709 aa15□□□□□ -0.01
CLPB-210ENST00000539148 CLTCQ00610 1675 aaKnown RBP15□□□□□ -0.01
CLPB-210ENST00000539148 RPRD2Q5VT52 1461 aaKnown RBP14.99□□□□□ -0.01
CLPB-210ENST00000539148 CAMSAP1Q5T5Y3 1602 aa14.99□□□□□ -0.01
CLPB-210ENST00000539148 MPHOSPH9Q99550 1183 aa14.98□□□□□ -0.01
CLPB-210ENST00000539148 ABCC3O15438 1527 aa14.97□□□□□ -0.01
CLPB-210ENST00000539148 EFCAB6Q5THR3 1501 aa14.97□□□□□ -0.01
CLPB-210ENST00000539148 ADAMTSL3P82987 1691 aa14.97□□□□□ -0.01
CLPB-210ENST00000539148 CLSPNQ9HAW4 1339 aa14.96□□□□□ -0.01
CLPB-210ENST00000539148 ARHGAP31Q2M1Z3 1444 aa14.96□□□□□ -0.01
CLPB-210ENST00000539148 PZPP20742 1482 aa14.95□□□□□ -0.02
CLPB-210ENST00000539148 CCER1Q8TC90 406 aaPredicted RBP14.94□□□□□ -0.02
CLPB-210ENST00000539148 CFAP65Q6ZU64 1925 aaKnown RBP14.94□□□□□ -0.02
CLPB-210ENST00000539148 E9PCH4 1651 aa14.93□□□□□ -0.02
CLPB-210ENST00000539148 PKD2Q13563 968 aa14.93□□□□□ -0.02
CLPB-210ENST00000539148 MADDQ8WXG6 1647 aa14.92□□□□□ -0.02
CLPB-210ENST00000539148 SPHKAPQ2M3C7 1700 aa14.92□□□□□ -0.02
CLPB-210ENST00000539148 ILDR1Q86SU0 546 aaPredicted RBP14.92□□□□□ -0.02
CLPB-210ENST00000539148 RIMS1Q86UR5 1692 aaKnown RBP14.92□□□□□ -0.02
CLPB-210ENST00000539148 SETD1BQ9UPS6 1966 aaKnown RBP14.91□□□□□ -0.02
CLPB-210ENST00000539148 ZMYM3Q14202 1370 aa14.9□□□□□ -0.02
CLPB-210ENST00000539148 DHX57Q6P158 1386 aaKnown RBP14.9□□□□□ -0.02
CLPB-210ENST00000539148 C3P01024 1663 aa14.9□□□□□ -0.02
CLPB-210ENST00000539148 PREX1Q8TCU6 1659 aa14.89□□□□□ -0.03
CLPB-210ENST00000539148 NPATQ14207 1427 aa14.87□□□□□ -0.03
CLPB-210ENST00000539148 KIF1BO60333 1816 aa14.87□□□□□ -0.03
CLPB-210ENST00000539148 CCDC144AA2RUR9 1427 aa14.86□□□□□ -0.03
CLPB-210ENST00000539148 SLC52A1Q9NWF4 448 aa14.86□□□□□ -0.03
CLPB-210ENST00000539148 TRPM2O94759 1503 aa14.86□□□□□ -0.03
CLPB-210ENST00000539148 SPATA31D1Q6ZQQ2 1576 aa14.84□□□□□ -0.03
CLPB-210ENST00000539148 PTPRTO14522 1441 aa14.83□□□□□ -0.03
CLPB-210ENST00000539148 ERVK-7P63135 1459 aa14.83□□□□□ -0.03
CLPB-210ENST00000539148 NOS1P29475 1434 aa14.83□□□□□ -0.04
CLPB-210ENST00000539148 ANKRD30BQ9BXX2 1392 aa14.82□□□□□ -0.04
CLPB-210ENST00000539148 PTPRMP28827 1452 aa14.82□□□□□ -0.04
CLPB-210ENST00000539148 KDM5AP29375 1690 aaKnown RBP14.81□□□□□ -0.04
CLPB-210ENST00000539148 TNRQ92752 1358 aa14.81□□□□□ -0.04
CLPB-210ENST00000539148 NLRP1Q9C000 1473 aa14.81□□□□□ -0.04
CLPB-210ENST00000539148 STAG3Q9UJ98 1225 aa14.8□□□□□ -0.04
CLPB-210ENST00000539148 TIMELESSQ9UNS1 1208 aa14.8□□□□□ -0.04
CLPB-210ENST00000539148 PIK3C2BO00750 1634 aa14.79□□□□□ -0.04
CLPB-210ENST00000539148 FOXD1Q16676 465 aa14.79□□□□□ -0.04
CLPB-210ENST00000539148 NEURL4Q96JN8 1562 aa14.78□□□□□ -0.04
CLPB-210ENST00000539148 SYNMO15061 1565 aa14.77□□□□□ -0.04
CLPB-210ENST00000539148 HDGFP51858 240 aaKnown RBP14.77□□□□□ -0.05
CLPB-210ENST00000539148 STAC3Q96MF2 364 aa14.77□□□□□ -0.05
CLPB-210ENST00000539148 FBXO31Q5XUX0 539 aaPredicted RBP14.76□□□□□ -0.05
CLPB-210ENST00000539148 CLTCL1P53675 1640 aa14.76□□□□□ -0.05
CLPB-210ENST00000539148 TONSLQ96HA7 1378 aa14.75□□□□□ -0.05
CLPB-210ENST00000539148 MYO3AQ8NEV4 1616 aa14.75□□□□□ -0.05
CLPB-210ENST00000539148 CEBPAP49715 358 aaPredicted RBP14.75□□□□□ -0.05
CLPB-210ENST00000539148 PLPPR3Q6T4P5 718 aa14.75□□□□□ -0.05
CLPB-210ENST00000539148 PLA2R1Q13018 1463 aa14.75□□□□□ -0.05
CLPB-210ENST00000539148 UHRF1BP1Q6BDS2 1440 aa14.75□□□□□ -0.05
CLPB-210ENST00000539148 ZNF142P52746 1687 aaPredicted RBP14.74□□□□□ -0.05
CLPB-210ENST00000539148 CHGAP10645 457 aaKnown RBP14.73□□□□□ -0.05
CLPB-210ENST00000539148 NEUROD1Q13562 356 aa14.73□□□□□ -0.05
CLPB-210ENST00000539148 ADGRB3O60242 1522 aa14.72□□□□□ -0.05
CLPB-210ENST00000539148 RPGRIP1LQ68CZ1 1315 aa14.72□□□□□ -0.05
CLPB-210ENST00000539148 A2ML1A8K2U0 1454 aa14.72□□□□□ -0.05
CLPB-210ENST00000539148 IDI1Q13907 227 aa14.72□□□□□ -0.05
CLPB-210ENST00000539148 THEMISQ8N1K5 641 aaPredicted RBP14.72□□□□□ -0.05
CLPB-210ENST00000539148 UGGT1Q9NYU2 1555 aa14.71□□□□□ -0.05
CLPB-210ENST00000539148 CEP170BQ9Y4F5 1589 aaPredicted RBP14.71□□□□□ -0.05
CLPB-210ENST00000539148 UBR1Q8IWV7 1749 aa14.71□□□□□ -0.05
CLPB-210ENST00000539148 TMEM131LA2VDJ0 1609 aa14.7□□□□□ -0.06
CLPB-210ENST00000539148 ZNF326Q5BKZ1 582 aaKnown RBP14.7□□□□□ -0.06
CLPB-210ENST00000539148 MYO5BQ9ULV0 1848 aa14.7□□□□□ -0.06
CLPB-210ENST00000539148 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.69□□□□□ -0.06
CLPB-210ENST00000539148 SIN3AQ96ST3 1273 aa14.68□□□□□ -0.06
CLPB-210ENST00000539148 EID1Q9Y6B2 187 aa14.67□□□□□ -0.06
CLPB-210ENST00000539148 SPATA31E1Q6ZUB1 1445 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms