RNA–Protein interactions for RNA: ENST00000535643.5

LINC01089-204, Transcript of long intergenic non-protein coding RNA 1089, humanhuman

TSL 1 (best)

Gene LINC01089, Length 1,014 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01089-204ENST00000535643 EP400Q96L91 3159 aa19.3■□□□□ 0.68
LINC01089-204ENST00000535643 XIRP1Q702N8 1843 aaKnown RBP19.3■□□□□ 0.68
LINC01089-204ENST00000535643 DEPDC5O75140 1603 aa19.29■□□□□ 0.68
LINC01089-204ENST00000535643 SUPT5HO00267 1087 aaKnown RBP19.29■□□□□ 0.68
LINC01089-204ENST00000535643 POTEDQ86YR6 584 aa19.29■□□□□ 0.68
LINC01089-204ENST00000535643 ABCC1P33527 1531 aa19.29■□□□□ 0.68
LINC01089-204ENST00000535643 PHLPP1O60346 1717 aa19.27■□□□□ 0.68
LINC01089-204ENST00000535643 RBM6P78332 1123 aaKnown RBP19.24■□□□□ 0.67
LINC01089-204ENST00000535643 AFF2P51816 1311 aa19.23■□□□□ 0.67
LINC01089-204ENST00000535643 HRCP23327 699 aa19.22■□□□□ 0.67
LINC01089-204ENST00000535643 THEMISQ8N1K5 641 aaPredicted RBP19.22■□□□□ 0.67
LINC01089-204ENST00000535643 ITSN2Q9NZM3 1697 aa19.2■□□□□ 0.66
LINC01089-204ENST00000535643 FGD6Q6ZV73 1430 aa19.19■□□□□ 0.66
LINC01089-204ENST00000535643 COL16A1Q07092 1604 aaPredicted RBP19.19■□□□□ 0.66
LINC01089-204ENST00000535643 KDM5DQ9BY66 1539 aa19.19■□□□□ 0.66
LINC01089-204ENST00000535643 TNRQ92752 1358 aa19.18■□□□□ 0.66
LINC01089-204ENST00000535643 LRRC9Q6ZRR7 1453 aa19.17■□□□□ 0.66
LINC01089-204ENST00000535643 CCDC125Q86Z20 511 aa19.17■□□□□ 0.66
LINC01089-204ENST00000535643 PIAS4Q8N2W9 510 aaPredicted RBP19.17■□□□□ 0.66
LINC01089-204ENST00000535643 QTRT2Q9H974 415 aaKnown RBP19.17■□□□□ 0.66
LINC01089-204ENST00000535643 NHSL1Q5SYE7 1610 aa19.16■□□□□ 0.66
LINC01089-204ENST00000535643 KIDINS220Q9ULH0 1771 aa19.16■□□□□ 0.66
LINC01089-204ENST00000535643 TMEM94Q12767 1356 aa19.15■□□□□ 0.66
LINC01089-204ENST00000535643 MYO5CQ9NQX4 1742 aa19.14■□□□□ 0.66
LINC01089-204ENST00000535643 CEP350Q5VT06 3117 aa19.14■□□□□ 0.66
LINC01089-204ENST00000535643 FBXO31Q5XUX0 539 aaPredicted RBP19.13■□□□□ 0.65
LINC01089-204ENST00000535643 FAM135AQ9P2D6 1515 aa19.13■□□□□ 0.65
LINC01089-204ENST00000535643 GGT6Q6P531 493 aa19.12■□□□□ 0.65
LINC01089-204ENST00000535643 ZC3H13Q5T200 1668 aaKnown RBP19.11■□□□□ 0.65
LINC01089-204ENST00000535643 UGGT1Q9NYU2 1555 aa19.11■□□□□ 0.65
LINC01089-204ENST00000535643 ARHGAP5Q13017 1502 aa19.11■□□□□ 0.65
LINC01089-204ENST00000535643 NGLY1Q96IV0 654 aa19.08■□□□□ 0.64
LINC01089-204ENST00000535643 MAP3K1Q13233 1512 aa19.08■□□□□ 0.64
LINC01089-204ENST00000535643 NWD1Q149M9 1564 aa19.07■□□□□ 0.64
LINC01089-204ENST00000535643 C1QTNF8P60827 252 aa19.07■□□□□ 0.64
LINC01089-204ENST00000535643 SLAIN2Q9P270 581 aa19.07■□□□□ 0.64
LINC01089-204ENST00000535643 SHPRHQ149N8 1683 aa19.07■□□□□ 0.64
LINC01089-204ENST00000535643 ATP7AQ04656 1500 aa19.06■□□□□ 0.64
LINC01089-204ENST00000535643 PSDA5PKW4 1024 aaPredicted RBP19.06■□□□□ 0.64
LINC01089-204ENST00000535643 SAMD9Q5K651 1589 aa19.06■□□□□ 0.64
LINC01089-204ENST00000535643 SLC34A2O95436 690 aa19.03■□□□□ 0.64
LINC01089-204ENST00000535643 BCL9LQ86UU0 1499 aa19.03■□□□□ 0.64
LINC01089-204ENST00000535643 DEFB132Q7Z7B7 95 aa19.02■□□□□ 0.64
LINC01089-204ENST00000535643 NLRP1Q9C000 1473 aa19.02■□□□□ 0.63
LINC01089-204ENST00000535643 ZNF784Q8NCA9 323 aaPredicted RBP19.01■□□□□ 0.63
LINC01089-204ENST00000535643 C8orf37Q96NL8 207 aa19■□□□□ 0.63
LINC01089-204ENST00000535643 PLXNC1O60486 1568 aa18.99■□□□□ 0.63
LINC01089-204ENST00000535643 MIA2Q96PC5 1412 aa18.98■□□□□ 0.63
LINC01089-204ENST00000535643 PZPP20742 1482 aa18.96■□□□□ 0.63
LINC01089-204ENST00000535643 BLMP54132 1417 aaPredicted RBP18.95■□□□□ 0.62
LINC01089-204ENST00000535643 KIF14Q15058 1648 aa18.95■□□□□ 0.62
LINC01089-204ENST00000535643 ADRA2BP18089 450 aa18.94■□□□□ 0.62
LINC01089-204ENST00000535643 PROSER2Q86WR7 435 aaPredicted RBP18.94■□□□□ 0.62
LINC01089-204ENST00000535643 MSH6P52701 1360 aa18.93■□□□□ 0.62
LINC01089-204ENST00000535643 A2MP01023 1474 aa18.93■□□□□ 0.62
LINC01089-204ENST00000535643 SCAF11Q99590 1463 aaKnown RBP18.91■□□□□ 0.62
LINC01089-204ENST00000535643 SAMD9LQ8IVG5 1584 aa18.91■□□□□ 0.62
LINC01089-204ENST00000535643 AHDC1Q5TGY3 1603 aaPredicted RBP18.91■□□□□ 0.62
LINC01089-204ENST00000535643 UTRNP46939 3433 aa18.91■□□□□ 0.62
LINC01089-204ENST00000535643 TIAM1Q13009 1591 aa18.9■□□□□ 0.62
LINC01089-204ENST00000535643 DIP2AQ14689 1571 aa18.9■□□□□ 0.62
LINC01089-204ENST00000535643 LTKP29376 864 aa18.88■□□□□ 0.61
LINC01089-204ENST00000535643 SPAG9O60271 1321 aaKnown RBP18.87■□□□□ 0.61
LINC01089-204ENST00000535643 KCNA6P17658 529 aa18.87■□□□□ 0.61
LINC01089-204ENST00000535643 PRDM15P57071 1507 aaPredicted RBP18.87■□□□□ 0.61
LINC01089-204ENST00000535643 CDC42BPBQ9Y5S2 1711 aa18.86■□□□□ 0.61
LINC01089-204ENST00000535643 TRPC5Q9UL62 973 aaPredicted RBP18.83■□□□□ 0.6
LINC01089-204ENST00000535643 ABCC3O15438 1527 aa18.83■□□□□ 0.6
LINC01089-204ENST00000535643 PRXQ9BXM0 1461 aa18.83■□□□□ 0.6
LINC01089-204ENST00000535643 TXNDC2Q86VQ3 553 aa18.82■□□□□ 0.6
LINC01089-204ENST00000535643 DCAF8L1A6NGE4 600 aa18.8■□□□□ 0.6
LINC01089-204ENST00000535643 SF3B2Q13435 895 aaKnown RBP18.8■□□□□ 0.6
LINC01089-204ENST00000535643 EHMT2Q96KQ7 1210 aa18.79■□□□□ 0.6
LINC01089-204ENST00000535643 PCDH10Q9P2E7 1040 aa18.79■□□□□ 0.6
LINC01089-204ENST00000535643 USP21Q9UK80 565 aa18.79■□□□□ 0.6
LINC01089-204ENST00000535643 NCOA2Q15596 1464 aa18.78■□□□□ 0.6
LINC01089-204ENST00000535643 R3HDM1Q15032 1099 aaKnown RBP18.76■□□□□ 0.59
LINC01089-204ENST00000535643 NKTRP30414 1462 aaKnown RBP18.76■□□□□ 0.59
LINC01089-204ENST00000535643 KDM5AP29375 1690 aaKnown RBP18.76■□□□□ 0.59
LINC01089-204ENST00000535643 ADGBQ8N7X0 1667 aa18.76■□□□□ 0.59
LINC01089-204ENST00000535643 ATRNO75882 1429 aa18.75■□□□□ 0.59
LINC01089-204ENST00000535643 RANGAP1P46060 587 aaPredicted RBP18.75■□□□□ 0.59
LINC01089-204ENST00000535643 ARHGAP23Q9P227 1491 aa18.75■□□□□ 0.59
LINC01089-204ENST00000535643 PREX2Q70Z35 1606 aa18.74■□□□□ 0.59
LINC01089-204ENST00000535643 ADAMTS2O95450 1211 aa18.74■□□□□ 0.59
LINC01089-204ENST00000535643 TROQ12816 1431 aaPredicted RBP18.74■□□□□ 0.59
LINC01089-204ENST00000535643 SETD5Q9C0A6 1442 aa18.73■□□□□ 0.59
LINC01089-204ENST00000535643 INO80Q9ULG1 1556 aaPredicted RBP18.72■□□□□ 0.59
LINC01089-204ENST00000535643 CDK11AQ9UQ88 783 aaPredicted RBP18.72■□□□□ 0.59
LINC01089-204ENST00000535643 SLIT1O75093 1534 aa18.72■□□□□ 0.59
LINC01089-204ENST00000535643 RTEL1-TNFRSF6BF6WH68 1400 aa18.72■□□□□ 0.59
LINC01089-204ENST00000535643 WASHC2CQ9Y4E1 1318 aa18.71■□□□□ 0.59
LINC01089-204ENST00000535643 PCGF6Q9BYE7 350 aa18.7■□□□□ 0.58
LINC01089-204ENST00000535643 UBR1Q8IWV7 1749 aa18.69■□□□□ 0.58
LINC01089-204ENST00000535643 CAPN15O75808 1086 aa18.69■□□□□ 0.58
LINC01089-204ENST00000535643 SYCP2Q9BX26 1530 aa18.69■□□□□ 0.58
LINC01089-204ENST00000535643 MAST1Q9Y2H9 1570 aa18.68■□□□□ 0.58
LINC01089-204ENST00000535643 HNRNPMP52272 730 aaKnown RBP eCLIP18.68■□□□□ 0.58
LINC01089-204ENST00000535643 BRINP3Q76B58 766 aa18.68■□□□□ 0.58
LINC01089-204ENST00000535643 EID1Q9Y6B2 187 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms