RNA–Protein interactions for RNA: ENST00000535621.6

PDXDC1-205, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 2,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-205ENST00000535621 YEATS2Q9ULM3 1422 aa30.34■■■□□ 2.45
PDXDC1-205ENST00000535621 ANKRD30BQ9BXX2 1392 aa30.33■■■□□ 2.45
PDXDC1-205ENST00000535621 ZNF316A6NFI3 1004 aaPredicted RBP30.32■■■□□ 2.44
PDXDC1-205ENST00000535621 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.32■■■□□ 2.444e-7■■□□□ 12.8
PDXDC1-205ENST00000535621 DIP2CQ9Y2E4 1556 aa30.32■■■□□ 2.44
PDXDC1-205ENST00000535621 DHX29Q7Z478 1369 aaKnown RBP30.3■■■□□ 2.44
PDXDC1-205ENST00000535621 TONSLQ96HA7 1378 aa30.3■■■□□ 2.44
PDXDC1-205ENST00000535621 ZMYM4Q5VZL5 1548 aa30.3■■■□□ 2.44
PDXDC1-205ENST00000535621 A2MP01023 1474 aa30.29■■■□□ 2.44
PDXDC1-205ENST00000535621 FAM135AQ9P2D6 1515 aa30.27■■■□□ 2.44
PDXDC1-205ENST00000535621 MAGI2Q86UL8 1455 aa30.26■■■□□ 2.43
PDXDC1-205ENST00000535621 EIF2AK4Q9P2K8 1649 aaKnown RBP30.25■■■□□ 2.43
PDXDC1-205ENST00000535621 KIF3BO15066 747 aa30.25■■■□□ 2.43
PDXDC1-205ENST00000535621 PPP1R15AO75807 674 aaPredicted RBP30.25■■■□□ 2.43
PDXDC1-205ENST00000535621 DEPDC5O75140 1603 aa30.24■■■□□ 2.43
PDXDC1-205ENST00000535621 PKD2Q13563 968 aa30.24■■■□□ 2.43
PDXDC1-205ENST00000535621 IQGAP3Q86VI3 1631 aa30.23■■■□□ 2.43
PDXDC1-205ENST00000535621 MROH1Q8NDA8 1641 aa30.22■■■□□ 2.43
PDXDC1-205ENST00000535621 RPRD2Q5VT52 1461 aaKnown RBP30.21■■■□□ 2.43
PDXDC1-205ENST00000535621 SIGLEC1Q9BZZ2 1709 aa30.15■■■□□ 2.42
PDXDC1-205ENST00000535621 RNF17Q9BXT8 1623 aaKnown RBP30.14■■■□□ 2.41
PDXDC1-205ENST00000535621 PRDM15P57071 1507 aaPredicted RBP30.13■■■□□ 2.41
PDXDC1-205ENST00000535621 BCORL1Q5H9F3 1711 aa30.11■■■□□ 2.41
PDXDC1-205ENST00000535621 VWDEQ8N2E2 1590 aa30.11■■■□□ 2.41
PDXDC1-205ENST00000535621 CEP152O94986 1710 aa30.1■■■□□ 2.41
PDXDC1-205ENST00000535621 ARHGEF40Q8TER5 1519 aa30.09■■■□□ 2.41
PDXDC1-205ENST00000535621 ATP10AO60312 1499 aa30.09■■■□□ 2.41
PDXDC1-205ENST00000535621 GGT6Q6P531 493 aa30.08■■■□□ 2.41
PDXDC1-205ENST00000535621 E9PCH4 1651 aa30.07■■■□□ 2.4
PDXDC1-205ENST00000535621 L3MBTL2Q969R5 705 aa30.06■■■□□ 2.4
PDXDC1-205ENST00000535621 DIEXFQ68CQ4 756 aaKnown RBP30.05■■■□□ 2.4
PDXDC1-205ENST00000535621 TET3O43151 1660 aa30.04■■■□□ 2.4
PDXDC1-205ENST00000535621 KANK1Q14678 1352 aa30.02■■■□□ 2.4
PDXDC1-205ENST00000535621 REREQ9P2R6 1566 aa30■■■□□ 2.39
PDXDC1-205ENST00000535621 PLA2R1Q13018 1463 aa29.99■■■□□ 2.39
PDXDC1-205ENST00000535621 CFAP65Q6ZU64 1925 aaKnown RBP29.96■■■□□ 2.39
PDXDC1-205ENST00000535621 ABCC3O15438 1527 aa29.94■■■□□ 2.38
PDXDC1-205ENST00000535621 EFCAB6Q5THR3 1501 aa29.94■■■□□ 2.38
PDXDC1-205ENST00000535621 AGLP35573 1532 aa29.92■■■□□ 2.38
PDXDC1-205ENST00000535621 LMTK2Q8IWU2 1503 aa29.92■■■□□ 2.38
PDXDC1-205ENST00000535621 SPHKAPQ2M3C7 1700 aa29.91■■■□□ 2.38
PDXDC1-205ENST00000535621 WASHC2CQ9Y4E1 1318 aa29.9■■■□□ 2.38
PDXDC1-205ENST00000535621 CAMSAP1Q5T5Y3 1602 aa29.89■■■□□ 2.38
PDXDC1-205ENST00000535621 MLECQ14165 292 aa29.88■■■□□ 2.37
PDXDC1-205ENST00000535621 CCDC144AA2RUR9 1427 aa29.88■■■□□ 2.37
PDXDC1-205ENST00000535621 ZC3H13Q5T200 1668 aaKnown RBP29.84■■■□□ 2.37
PDXDC1-205ENST00000535621 NBPF8Q3BBV2 869 aa29.84■■■□□ 2.37
PDXDC1-205ENST00000535621 NPATQ14207 1427 aa29.84■■■□□ 2.37
PDXDC1-205ENST00000535621 UGGT1Q9NYU2 1555 aa29.82■■■□□ 2.36
PDXDC1-205ENST00000535621 TRPM2O94759 1503 aa29.82■■■□□ 2.36
PDXDC1-205ENST00000535621 PTPRTO14522 1441 aa29.81■■■□□ 2.36
PDXDC1-205ENST00000535621 CLTCL1P53675 1640 aa29.81■■■□□ 2.36
PDXDC1-205ENST00000535621 CLTCQ00610 1675 aaKnown RBP29.81■■■□□ 2.36
PDXDC1-205ENST00000535621 ARID4BQ4LE39 1312 aaPredicted RBP29.79■■■□□ 2.36
PDXDC1-205ENST00000535621 UHRF1BP1Q6BDS2 1440 aa29.75■■■□□ 2.35
PDXDC1-205ENST00000535621 HIRIP3Q9BW71 556 aaPredicted RBP29.74■■■□□ 2.35
PDXDC1-205ENST00000535621 RGL3Q3MIN7 710 aa29.71■■■□□ 2.35
PDXDC1-205ENST00000535621 DCAF11Q8TEB1 546 aa29.69■■■□□ 2.34
PDXDC1-205ENST00000535621 SYNMO15061 1565 aa29.68■■■□□ 2.34
PDXDC1-205ENST00000535621 ARHGAP31Q2M1Z3 1444 aa29.68■■■□□ 2.34
PDXDC1-205ENST00000535621 PREX1Q8TCU6 1659 aa29.68■■■□□ 2.34
PDXDC1-205ENST00000535621 EIF4G2P78344 907 aaKnown RBP eCLIP29.66■■■□□ 2.34
PDXDC1-205ENST00000535621 SPATA31E1Q6ZUB1 1445 aa29.65■■■□□ 2.34
PDXDC1-205ENST00000535621 HSPA5P11021 654 aaKnown RBP29.65■■■□□ 2.34
PDXDC1-205ENST00000535621 NOS1P29475 1434 aa29.65■■■□□ 2.34
PDXDC1-205ENST00000535621 ZNF326Q5BKZ1 582 aaKnown RBP29.65■■■□□ 2.34
PDXDC1-205ENST00000535621 FBXO31Q5XUX0 539 aaPredicted RBP29.65■■■□□ 2.34
PDXDC1-205ENST00000535621 MROH2AA6NES4 1674 aa29.64■■■□□ 2.34
PDXDC1-205ENST00000535621 KDM2AQ9Y2K7 1162 aa29.64■■■□□ 2.33
PDXDC1-205ENST00000535621 KIF1BO60333 1816 aa29.63■■■□□ 2.33
PDXDC1-205ENST00000535621 PPP6R1Q9UPN7 881 aa29.62■■■□□ 2.33
PDXDC1-205ENST00000535621 CNTLNQ9NXG0 1405 aa29.62■■■□□ 2.33
PDXDC1-205ENST00000535621 RALGAPBQ86X10 1494 aa29.61■■■□□ 2.33
PDXDC1-205ENST00000535621 PIK3C2BO00750 1634 aa29.59■■■□□ 2.33
PDXDC1-205ENST00000535621 PRAG1Q86YV5 1406 aa29.57■■■□□ 2.32
PDXDC1-205ENST00000535621 ERVK-7P63135 1459 aa29.57■■■□□ 2.32
PDXDC1-205ENST00000535621 MIER1Q8N108 512 aa29.57■■■□□ 2.32
PDXDC1-205ENST00000535621 FER1L4A9Z1Z3 1794 aa29.56■■■□□ 2.32
PDXDC1-205ENST00000535621 ESF1Q9H501 851 aaKnown RBP29.55■■■□□ 2.32
PDXDC1-205ENST00000535621 ZMYM3Q14202 1370 aa29.55■■■□□ 2.32
PDXDC1-205ENST00000535621 NEURL4Q96JN8 1562 aa29.54■■■□□ 2.32
PDXDC1-205ENST00000535621 MYO5BQ9ULV0 1848 aa29.52■■■□□ 2.32
PDXDC1-205ENST00000535621 CHGAP10645 457 aaKnown RBP29.52■■■□□ 2.32
PDXDC1-205ENST00000535621 ADGRB3O60242 1522 aa29.52■■■□□ 2.32
PDXDC1-205ENST00000535621 DDX10Q13206 875 aaKnown RBP29.51■■■□□ 2.31
PDXDC1-205ENST00000535621 TRPM1Q7Z4N2 1603 aa29.5■■■□□ 2.31
PDXDC1-205ENST00000535621 IDI1Q13907 227 aa29.5■■■□□ 2.31
PDXDC1-205ENST00000535621 SPATA31D1Q6ZQQ2 1576 aa29.5■■■□□ 2.31
PDXDC1-205ENST00000535621 USP47Q96K76 1375 aa29.48■■■□□ 2.31
PDXDC1-205ENST00000535621 IFT172Q9UG01 1749 aa29.47■■■□□ 2.31
PDXDC1-205ENST00000535621 CEBPAP49715 358 aaPredicted RBP29.47■■■□□ 2.31
PDXDC1-205ENST00000535621 C3P01024 1663 aa29.46■■■□□ 2.31
PDXDC1-205ENST00000535621 CARD11Q9BXL7 1154 aa29.45■■■□□ 2.31
PDXDC1-205ENST00000535621 MADDQ8WXG6 1647 aa29.45■■■□□ 2.3
PDXDC1-205ENST00000535621 PLPPR3Q6T4P5 718 aa29.45■■■□□ 2.3
PDXDC1-205ENST00000535621 WASHC2AQ641Q2 1341 aa29.44■■■□□ 2.3
PDXDC1-205ENST00000535621 ROCK2O75116 1388 aaKnown RBP29.44■■■□□ 2.3
PDXDC1-205ENST00000535621 STAC3Q96MF2 364 aa29.44■■■□□ 2.3
PDXDC1-205ENST00000535621 TMEM131LA2VDJ0 1609 aa29.41■■■□□ 2.3
PDXDC1-205ENST00000535621 PPLO60437 1756 aa29.41■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms