RNA–Protein interactions for RNA: ENST00000534131.1

CTSC-209, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-209ENST00000534131 ERBINQ96RT1 1412 aa17.69■□□□□ 0.42
CTSC-209ENST00000534131 AGLP35573 1532 aa17.68■□□□□ 0.42
CTSC-209ENST00000534131 BCORL1Q5H9F3 1711 aa17.67■□□□□ 0.42
CTSC-209ENST00000534131 ANKRD50Q9ULJ7 1429 aa17.66■□□□□ 0.42
CTSC-209ENST00000534131 KIF3BO15066 747 aa17.66■□□□□ 0.42
CTSC-209ENST00000534131 NCBP3Q53F19 620 aaKnown RBP17.66■□□□□ 0.42
CTSC-209ENST00000534131 HFM1A2PYH4 1435 aa17.64■□□□□ 0.42
CTSC-209ENST00000534131 ESF1Q9H501 851 aaKnown RBP17.64■□□□□ 0.41
CTSC-209ENST00000534131 ACIN1Q9UKV3 1341 aaKnown RBP17.64■□□□□ 0.41
CTSC-209ENST00000534131 SIGLEC1Q9BZZ2 1709 aa17.63■□□□□ 0.41
CTSC-209ENST00000534131 MLECQ14165 292 aa17.62■□□□□ 0.41
CTSC-209ENST00000534131 GGT6Q6P531 493 aa17.62■□□□□ 0.41
CTSC-209ENST00000534131 NAIPQ13075 1403 aa17.62■□□□□ 0.41
CTSC-209ENST00000534131 ADAMTSL3P82987 1691 aa17.61■□□□□ 0.41
CTSC-209ENST00000534131 MAPK8IP2Q13387 824 aaPredicted RBP17.61■□□□□ 0.41
CTSC-209ENST00000534131 KANK1Q14678 1352 aa17.6■□□□□ 0.41
CTSC-209ENST00000534131 SETD5Q9C0A6 1442 aa17.6■□□□□ 0.41
CTSC-209ENST00000534131 RNF17Q9BXT8 1623 aaKnown RBP17.6■□□□□ 0.41
CTSC-209ENST00000534131 FER1L4A9Z1Z3 1794 aa17.6■□□□□ 0.41
CTSC-209ENST00000534131 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.57■□□□□ 0.4
CTSC-209ENST00000534131 DEPDC5O75140 1603 aa17.57■□□□□ 0.4
CTSC-209ENST00000534131 PTPRMP28827 1452 aa17.56■□□□□ 0.4
CTSC-209ENST00000534131 ZC3H13Q5T200 1668 aaKnown RBP17.56■□□□□ 0.4
CTSC-209ENST00000534131 MADDQ8WXG6 1647 aa17.56■□□□□ 0.4
CTSC-209ENST00000534131 TRIM52Q96A61 297 aa17.55■□□□□ 0.4
CTSC-209ENST00000534131 FAM135AQ9P2D6 1515 aa17.55■□□□□ 0.4
CTSC-209ENST00000534131 UNC13BO14795 1591 aa17.54■□□□□ 0.4
CTSC-209ENST00000534131 WASHC2CQ9Y4E1 1318 aa17.54■□□□□ 0.4
CTSC-209ENST00000534131 PCGF6Q9BYE7 350 aa17.54■□□□□ 0.4
CTSC-209ENST00000534131 CLTCQ00610 1675 aaKnown RBP17.54■□□□□ 0.4
CTSC-209ENST00000534131 CEP152O94986 1710 aa17.53■□□□□ 0.4
CTSC-209ENST00000534131 CNTLNQ9NXG0 1405 aa17.53■□□□□ 0.4
CTSC-209ENST00000534131 PRDM15P57071 1507 aaPredicted RBP17.52■□□□□ 0.4
CTSC-209ENST00000534131 RIMS1Q86UR5 1692 aaKnown RBP17.52■□□□□ 0.4
CTSC-209ENST00000534131 HRCP23327 699 aa17.52■□□□□ 0.4
CTSC-209ENST00000534131 CNKSR2Q8WXI2 1034 aa17.52■□□□□ 0.4
CTSC-209ENST00000534131 KDM5DQ9BY66 1539 aa17.52■□□□□ 0.39
CTSC-209ENST00000534131 MROH2AA6NES4 1674 aa17.52■□□□□ 0.39
CTSC-209ENST00000534131 NUP155O75694 1391 aa17.51■□□□□ 0.39
CTSC-209ENST00000534131 RAB3GAP2Q9H2M9 1393 aa17.51■□□□□ 0.39
CTSC-209ENST00000534131 CFAP65Q6ZU64 1925 aaKnown RBP17.5■□□□□ 0.39
CTSC-209ENST00000534131 MROH1Q8NDA8 1641 aa17.5■□□□□ 0.39
CTSC-209ENST00000534131 IQGAP3Q86VI3 1631 aa17.49■□□□□ 0.39
CTSC-209ENST00000534131 CAMSAP1Q5T5Y3 1602 aa17.47■□□□□ 0.39
CTSC-209ENST00000534131 TET3O43151 1660 aa17.46■□□□□ 0.39
CTSC-209ENST00000534131 VWDEQ8N2E2 1590 aa17.46■□□□□ 0.39
CTSC-209ENST00000534131 ABCC3O15438 1527 aa17.46■□□□□ 0.39
CTSC-209ENST00000534131 LMTK2Q8IWU2 1503 aa17.44■□□□□ 0.38
CTSC-209ENST00000534131 C3P01024 1663 aa17.44■□□□□ 0.38
CTSC-209ENST00000534131 ZMYM3Q14202 1370 aa17.42■□□□□ 0.38
CTSC-209ENST00000534131 SLC4A1APQ9BWU0 796 aaKnown RBP17.42■□□□□ 0.38
CTSC-209ENST00000534131 SETD1BQ9UPS6 1966 aaKnown RBP17.42■□□□□ 0.38
CTSC-209ENST00000534131 NPM3O75607 178 aaKnown RBP17.4■□□□□ 0.38
CTSC-209ENST00000534131 EFCAB6Q5THR3 1501 aa17.39■□□□□ 0.37
CTSC-209ENST00000534131 E9PCH4 1651 aa17.39■□□□□ 0.37
CTSC-209ENST00000534131 ARHGAP31Q2M1Z3 1444 aa17.38■□□□□ 0.37
CTSC-209ENST00000534131 MPHOSPH9Q99550 1183 aa17.38■□□□□ 0.37
CTSC-209ENST00000534131 PZPP20742 1482 aa17.37■□□□□ 0.37
CTSC-209ENST00000534131 RPRD2Q5VT52 1461 aaKnown RBP17.37■□□□□ 0.37
CTSC-209ENST00000534131 PREX1Q8TCU6 1659 aa17.37■□□□□ 0.37
CTSC-209ENST00000534131 LMTK3Q96Q04 1460 aa17.36■□□□□ 0.37
CTSC-209ENST00000534131 CEBPAP49715 358 aaPredicted RBP17.35■□□□□ 0.37
CTSC-209ENST00000534131 PKD2Q13563 968 aa17.35■□□□□ 0.37
CTSC-209ENST00000534131 SPHKAPQ2M3C7 1700 aa17.35■□□□□ 0.37
CTSC-209ENST00000534131 NPATQ14207 1427 aa17.33■□□□□ 0.36
CTSC-209ENST00000534131 HSPA2P54652 639 aa17.32■□□□□ 0.36
CTSC-209ENST00000534131 ERVK-7P63135 1459 aa17.31■□□□□ 0.36
CTSC-209ENST00000534131 SPATA31D1Q6ZQQ2 1576 aa17.3■□□□□ 0.36
CTSC-209ENST00000534131 TNRQ92752 1358 aa17.29■□□□□ 0.36
CTSC-209ENST00000534131 FBXO31Q5XUX0 539 aaPredicted RBP17.29■□□□□ 0.36
CTSC-209ENST00000534131 DMRT2Q9Y5R5 561 aa17.29■□□□□ 0.36
CTSC-209ENST00000534131 KIF1BO60333 1816 aa17.28■□□□□ 0.36
CTSC-209ENST00000534131 SLC52A1Q9NWF4 448 aa17.26■□□□□ 0.35
CTSC-209ENST00000534131 NOS1P29475 1434 aa17.26■□□□□ 0.35
CTSC-209ENST00000534131 ILDR1Q86SU0 546 aaPredicted RBP17.25■□□□□ 0.35
CTSC-209ENST00000534131 STAG3Q9UJ98 1225 aa17.25■□□□□ 0.35
CTSC-209ENST00000534131 MYO3AQ8NEV4 1616 aa17.25■□□□□ 0.35
CTSC-209ENST00000534131 NLRP1Q9C000 1473 aa17.24■□□□□ 0.35
CTSC-209ENST00000534131 UHRF1BP1Q6BDS2 1440 aa17.24■□□□□ 0.35
CTSC-209ENST00000534131 PTPRTO14522 1441 aa17.23■□□□□ 0.35
CTSC-209ENST00000534131 TRPM2O94759 1503 aa17.23■□□□□ 0.35
CTSC-209ENST00000534131 DHX57Q6P158 1386 aaKnown RBP17.23■□□□□ 0.35
CTSC-209ENST00000534131 SYNMO15061 1565 aa17.23■□□□□ 0.35
CTSC-209ENST00000534131 CCDC144AA2RUR9 1427 aa17.21■□□□□ 0.35
CTSC-209ENST00000534131 ZNF142P52746 1687 aaPredicted RBP17.21■□□□□ 0.35
CTSC-209ENST00000534131 PIK3C2BO00750 1634 aa17.21■□□□□ 0.35
CTSC-209ENST00000534131 KDM5AP29375 1690 aaKnown RBP17.2■□□□□ 0.34
CTSC-209ENST00000534131 CHGAP10645 457 aaKnown RBP17.2■□□□□ 0.34
CTSC-209ENST00000534131 A2ML1A8K2U0 1454 aa17.19■□□□□ 0.34
CTSC-209ENST00000534131 IDI1Q13907 227 aa17.19■□□□□ 0.34
CTSC-209ENST00000534131 MYO5BQ9ULV0 1848 aa17.19■□□□□ 0.34
CTSC-209ENST00000534131 CEP170BQ9Y4F5 1589 aaPredicted RBP17.19■□□□□ 0.34
CTSC-209ENST00000534131 CLTCL1P53675 1640 aa17.18■□□□□ 0.34
CTSC-209ENST00000534131 CCER1Q8TC90 406 aaPredicted RBP17.18■□□□□ 0.34
CTSC-209ENST00000534131 UGGT1Q9NYU2 1555 aa17.18■□□□□ 0.34
CTSC-209ENST00000534131 UBR1Q8IWV7 1749 aa17.18■□□□□ 0.34
CTSC-209ENST00000534131 ANKRD30BQ9BXX2 1392 aa17.17■□□□□ 0.34
CTSC-209ENST00000534131 THEMISQ8N1K5 641 aaPredicted RBP17.17■□□□□ 0.34
CTSC-209ENST00000534131 HDGFP51858 240 aaKnown RBP17.15■□□□□ 0.34
CTSC-209ENST00000534131 PLA2R1Q13018 1463 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 167.9 ms