RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 PLPPR3Q6T4P5 718 aa26.07■■□□□ 1.76
NXF1-216ENST00000533499 SETD5Q9C0A6 1442 aa26.06■■□□□ 1.76
NXF1-216ENST00000533499 TRIM52Q96A61 297 aa26.06■■□□□ 1.76
NXF1-216ENST00000533499 WASHC2CQ9Y4E1 1318 aa26.03■■□□□ 1.76
NXF1-216ENST00000533499 KANK1Q14678 1352 aa26.03■■□□□ 1.76
NXF1-216ENST00000533499 MADDQ8WXG6 1647 aa26.02■■□□□ 1.76
NXF1-216ENST00000533499 RNF17Q9BXT8 1623 aaKnown RBP26.02■■□□□ 1.76
NXF1-216ENST00000533499 FER1L4A9Z1Z3 1794 aa26.02■■□□□ 1.76
NXF1-216ENST00000533499 RAB3GAP2Q9H2M9 1393 aa25.99■■□□□ 1.75
NXF1-216ENST00000533499 ADAMTSL3P82987 1691 aa25.99■■□□□ 1.75
NXF1-216ENST00000533499 NUP155O75694 1391 aa25.98■■□□□ 1.75
NXF1-216ENST00000533499 RIMS1Q86UR5 1692 aaKnown RBP25.98■■□□□ 1.75
NXF1-216ENST00000533499 CLTCQ00610 1675 aaKnown RBP25.97■■□□□ 1.75
NXF1-216ENST00000533499 MROH1Q8NDA8 1641 aa25.97■■□□□ 1.75
NXF1-216ENST00000533499 KDM4FA0A1W2PPD8 638 aa25.97■■□□□ 1.75
NXF1-216ENST00000533499 DEPDC5O75140 1603 aa25.96■■□□□ 1.75
NXF1-216ENST00000533499 CEP152O94986 1710 aa25.95■■□□□ 1.74
NXF1-216ENST00000533499 PPP6R1Q9UPN7 881 aa25.95■■□□□ 1.74
NXF1-216ENST00000533499 UNC13BO14795 1591 aa25.95■■□□□ 1.74
NXF1-216ENST00000533499 PRDM15P57071 1507 aaPredicted RBP25.94■■□□□ 1.74
NXF1-216ENST00000533499 KDM5DQ9BY66 1539 aa25.93■■□□□ 1.74
NXF1-216ENST00000533499 CNTLNQ9NXG0 1405 aa25.91■■□□□ 1.74
NXF1-216ENST00000533499 ABCC3O15438 1527 aa25.9■■□□□ 1.74
NXF1-216ENST00000533499 CEBPAP49715 358 aaPredicted RBP25.9■■□□□ 1.74
NXF1-216ENST00000533499 ZC3H13Q5T200 1668 aaKnown RBP25.87■■□□□ 1.73
NXF1-216ENST00000533499 ZMYM3Q14202 1370 aa25.86■■□□□ 1.73
NXF1-216ENST00000533499 SLC4A1APQ9BWU0 796 aaKnown RBP25.85■■□□□ 1.73
NXF1-216ENST00000533499 PTPRMP28827 1452 aa25.85■■□□□ 1.73
NXF1-216ENST00000533499 CAMSAP1Q5T5Y3 1602 aa25.85■■□□□ 1.73
NXF1-216ENST00000533499 IQGAP3Q86VI3 1631 aa25.85■■□□□ 1.73
NXF1-216ENST00000533499 FAM135AQ9P2D6 1515 aa25.84■■□□□ 1.73
NXF1-216ENST00000533499 VWDEQ8N2E2 1590 aa25.84■■□□□ 1.73
NXF1-216ENST00000533499 CFAP65Q6ZU64 1925 aaKnown RBP25.84■■□□□ 1.73
NXF1-216ENST00000533499 ACIN1Q9UKV3 1341 aaKnown RBP25.83■■□□□ 1.73
NXF1-216ENST00000533499 MROH2AA6NES4 1674 aa25.82■■□□□ 1.72
NXF1-216ENST00000533499 C3P01024 1663 aa25.81■■□□□ 1.72
NXF1-216ENST00000533499 TET3O43151 1660 aa25.8■■□□□ 1.72
NXF1-216ENST00000533499 HRCP23327 699 aa25.79■■□□□ 1.72
NXF1-216ENST00000533499 FBXO31Q5XUX0 539 aaPredicted RBP25.79■■□□□ 1.72
NXF1-216ENST00000533499 PZPP20742 1482 aa25.79■■□□□ 1.72
NXF1-216ENST00000533499 LMTK2Q8IWU2 1503 aa25.78■■□□□ 1.72
NXF1-216ENST00000533499 PKD2Q13563 968 aa25.78■■□□□ 1.72
NXF1-216ENST00000533499 MPHOSPH9Q99550 1183 aa25.78■■□□□ 1.72
NXF1-216ENST00000533499 EFCAB6Q5THR3 1501 aa25.77■■□□□ 1.72
NXF1-216ENST00000533499 NPATQ14207 1427 aa25.74■■□□□ 1.71
NXF1-216ENST00000533499 FOXD1Q16676 465 aa25.74■■□□□ 1.71
NXF1-216ENST00000533499 AEBP2Q6ZN18 517 aaPredicted RBP25.74■■□□□ 1.71
NXF1-216ENST00000533499 E9PCH4 1651 aa25.73■■□□□ 1.71
NXF1-216ENST00000533499 ARHGAP31Q2M1Z3 1444 aa25.71■■□□□ 1.71
NXF1-216ENST00000533499 PREX1Q8TCU6 1659 aa25.68■■□□□ 1.7
NXF1-216ENST00000533499 TNRQ92752 1358 aa25.68■■□□□ 1.7
NXF1-216ENST00000533499 ERVK-7P63135 1459 aa25.67■■□□□ 1.7
NXF1-216ENST00000533499 RPRD2Q5VT52 1461 aaKnown RBP25.66■■□□□ 1.7
NXF1-216ENST00000533499 SPATA31D1Q6ZQQ2 1576 aa25.61■■□□□ 1.69
NXF1-216ENST00000533499 SPHKAPQ2M3C7 1700 aa25.6■■□□□ 1.69
NXF1-216ENST00000533499 SETD1BQ9UPS6 1966 aaKnown RBP25.6■■□□□ 1.69
NXF1-216ENST00000533499 CHGAP10645 457 aaKnown RBP25.59■■□□□ 1.69
NXF1-216ENST00000533499 NOS1P29475 1434 aa25.58■■□□□ 1.69
NXF1-216ENST00000533499 STAG3Q9UJ98 1225 aa25.58■■□□□ 1.69
NXF1-216ENST00000533499 SYNMO15061 1565 aa25.57■■□□□ 1.68
NXF1-216ENST00000533499 UHRF1BP1Q6BDS2 1440 aa25.57■■□□□ 1.68
NXF1-216ENST00000533499 DHX57Q6P158 1386 aaKnown RBP25.56■■□□□ 1.68
NXF1-216ENST00000533499 MYO3AQ8NEV4 1616 aa25.55■■□□□ 1.68
NXF1-216ENST00000533499 UGGT1Q9NYU2 1555 aa25.55■■□□□ 1.68
NXF1-216ENST00000533499 IDI1Q13907 227 aa25.54■■□□□ 1.68
NXF1-216ENST00000533499 SLC52A1Q9NWF4 448 aa25.53■■□□□ 1.68
NXF1-216ENST00000533499 PTPRTO14522 1441 aa25.53■■□□□ 1.68
NXF1-216ENST00000533499 TRPM2O94759 1503 aa25.52■■□□□ 1.68
NXF1-216ENST00000533499 PLA2R1Q13018 1463 aa25.51■■□□□ 1.67
NXF1-216ENST00000533499 NLRP1Q9C000 1473 aa25.51■■□□□ 1.67
NXF1-216ENST00000533499 CCDC144AA2RUR9 1427 aa25.5■■□□□ 1.67
NXF1-216ENST00000533499 PIK3C2BO00750 1634 aa25.48■■□□□ 1.67
NXF1-216ENST00000533499 CLTCL1P53675 1640 aa25.48■■□□□ 1.67
NXF1-216ENST00000533499 CEP170BQ9Y4F5 1589 aaPredicted RBP25.48■■□□□ 1.67
NXF1-216ENST00000533499 CCER1Q8TC90 406 aaPredicted RBP25.48■■□□□ 1.67
NXF1-216ENST00000533499 A2ML1A8K2U0 1454 aa25.47■■□□□ 1.67
NXF1-216ENST00000533499 ANKRD30BQ9BXX2 1392 aa25.47■■□□□ 1.67
NXF1-216ENST00000533499 HSPA2P54652 639 aa25.47■■□□□ 1.67
NXF1-216ENST00000533499 ZNF326Q5BKZ1 582 aaKnown RBP25.44■■□□□ 1.66
NXF1-216ENST00000533499 ZNF142P52746 1687 aaPredicted RBP25.42■■□□□ 1.66
NXF1-216ENST00000533499 KIF1BO60333 1816 aa25.42■■□□□ 1.66
NXF1-216ENST00000533499 LMTK3Q96Q04 1460 aa25.42■■□□□ 1.66
NXF1-216ENST00000533499 NEUROD1Q13562 356 aa25.42■■□□□ 1.66
NXF1-216ENST00000533499 THEMISQ8N1K5 641 aaPredicted RBP25.42■■□□□ 1.66
NXF1-216ENST00000533499 ADGRB3O60242 1522 aa25.41■■□□□ 1.66
NXF1-216ENST00000533499 MYO5BQ9ULV0 1848 aa25.4■■□□□ 1.66
NXF1-216ENST00000533499 RGL3Q3MIN7 710 aa25.4■■□□□ 1.66
NXF1-216ENST00000533499 SIN3AQ96ST3 1273 aa25.4■■□□□ 1.66
NXF1-216ENST00000533499 UBR1Q8IWV7 1749 aa25.4■■□□□ 1.66
NXF1-216ENST00000533499 TMEM131LA2VDJ0 1609 aa25.36■■□□□ 1.65
NXF1-216ENST00000533499 NUTM2DQ5VT03 806 aaPredicted RBP25.35■■□□□ 1.65
NXF1-216ENST00000533499 SENP3Q9H4L4 574 aaPredicted RBP25.35■■□□□ 1.65
NXF1-216ENST00000533499 PPP1R15AO75807 674 aaPredicted RBP25.32■■□□□ 1.64
NXF1-216ENST00000533499 EID1Q9Y6B2 187 aa25.31■■□□□ 1.64
NXF1-216ENST00000533499 KDM5AP29375 1690 aaKnown RBP25.3■■□□□ 1.64
NXF1-216ENST00000533499 TXNDC2Q86VQ3 553 aa25.3■■□□□ 1.64
NXF1-216ENST00000533499 TMEM2Q9UHN6 1383 aa25.3■■□□□ 1.64
NXF1-216ENST00000533499 ANKLE2Q86XL3 938 aa25.29■■□□□ 1.64
NXF1-216ENST00000533499 BCANQ96GW7 911 aa25.29■■□□□ 1.64
NXF1-216ENST00000533499 NCKAP5LQ9HCH0 1330 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms