RNA–Protein interactions for RNA: ENST00000533413.5

CKAP5-212, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 1 (best)

Gene CKAP5, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-212ENST00000533413 MAGI2Q86UL8 1455 aa7.58□□□□□ -1.2
CKAP5-212ENST00000533413 ARID3CA6NKF2 412 aa7.58□□□□□ -1.2
CKAP5-212ENST00000533413 ABCC1P33527 1531 aa7.57□□□□□ -1.2
CKAP5-212ENST00000533413 DENND4BO75064 1496 aaPredicted RBP7.57□□□□□ -1.2
CKAP5-212ENST00000533413 RSPH4AQ5TD94 716 aa7.57□□□□□ -1.2
CKAP5-212ENST00000533413 TMED8Q6PL24 325 aaPredicted RBP7.56□□□□□ -1.2
CKAP5-212ENST00000533413 ADGRL1O94910 1474 aa7.56□□□□□ -1.2
CKAP5-212ENST00000533413 KDM5CP41229 1560 aa7.56□□□□□ -1.2
CKAP5-212ENST00000533413 ARHGEF40Q8TER5 1519 aa7.56□□□□□ -1.2
CKAP5-212ENST00000533413 ZNF518AQ6AHZ1 1483 aa7.56□□□□□ -1.2
CKAP5-212ENST00000533413 EFCAB2Q5VUJ9 269 aa7.55□□□□□ -1.2
CKAP5-212ENST00000533413 BCCIPQ9P287 314 aaKnown RBP eCLIP7.55□□□□□ -1.2
CKAP5-212ENST00000533413 POGZQ7Z3K3 1410 aa7.55□□□□□ -1.2
CKAP5-212ENST00000533413 ZNF592Q92610 1267 aa7.55□□□□□ -1.2
CKAP5-212ENST00000533413 SUPT16HQ9Y5B9 1047 aaKnown RBP7.55□□□□□ -1.2
CKAP5-212ENST00000533413 GPATCH8Q9UKJ3 1502 aaKnown RBP7.55□□□□□ -1.2
CKAP5-212ENST00000533413 CCNB3Q8WWL7 1395 aa7.55□□□□□ -1.2
CKAP5-212ENST00000533413 SAMD9LQ8IVG5 1584 aa7.55□□□□□ -1.2
CKAP5-212ENST00000533413 HECW2Q9P2P5 1572 aa7.55□□□□□ -1.2
CKAP5-212ENST00000533413 REREQ9P2R6 1566 aa7.55□□□□□ -1.2
CKAP5-212ENST00000533413 NCOA2Q15596 1464 aa7.54□□□□□ -1.2
CKAP5-212ENST00000533413 KIAA1107Q9UPP5 1409 aa7.54□□□□□ -1.2
CKAP5-212ENST00000533413 ZNF692Q9BU19 519 aaPredicted RBP7.54□□□□□ -1.2
CKAP5-212ENST00000533413 BRPF1P55201 1214 aaPredicted RBP7.53□□□□□ -1.2
CKAP5-212ENST00000533413 FOXD4L5Q5VV16 416 aaPredicted RBP7.53□□□□□ -1.2
CKAP5-212ENST00000533413 FOXD4L4Q8WXT5 416 aaPredicted RBP7.53□□□□□ -1.2
CKAP5-212ENST00000533413 COL17A1Q9UMD9 1497 aaPredicted RBP7.53□□□□□ -1.2
CKAP5-212ENST00000533413 ZFYVE16Q7Z3T8 1539 aa7.53□□□□□ -1.2
CKAP5-212ENST00000533413 ARHGEF5Q12774 1597 aa7.53□□□□□ -1.2
CKAP5-212ENST00000533413 NAP1L5Q96NT1 182 aaPredicted RBP7.53□□□□□ -1.2
CKAP5-212ENST00000533413 MYT1LQ9UL68 1186 aa7.53□□□□□ -1.2
CKAP5-212ENST00000533413 MIA2Q96PC5 1412 aa7.52□□□□□ -1.21
CKAP5-212ENST00000533413 RAD21O60216 631 aa7.52□□□□□ -1.21
CKAP5-212ENST00000533413 AAMPQ13685 434 aa7.52□□□□□ -1.21
CKAP5-212ENST00000533413 CWC22Q9HCG8 908 aaKnown RBP7.52□□□□□ -1.21
CKAP5-212ENST00000533413 SCAPERQ9BY12 1400 aa7.52□□□□□ -1.21
CKAP5-212ENST00000533413 MLH3Q9UHC1 1453 aa7.52□□□□□ -1.21
CKAP5-212ENST00000533413 RBM25P49756 843 aaKnown RBP7.51□□□□□ -1.21
CKAP5-212ENST00000533413 INO80Q9ULG1 1556 aaPredicted RBP7.51□□□□□ -1.21
CKAP5-212ENST00000533413 ADGBQ8N7X0 1667 aa7.51□□□□□ -1.21
CKAP5-212ENST00000533413 ERICH6BQ5W0A0 696 aa7.51□□□□□ -1.21
CKAP5-212ENST00000533413 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.51□□□□□ -1.21
CKAP5-212ENST00000533413 MTMR7Q9Y216 660 aa7.51□□□□□ -1.21
CKAP5-212ENST00000533413 MAST1Q9Y2H9 1570 aa7.51□□□□□ -1.21
CKAP5-212ENST00000533413 CROCC2H7BZ55 1655 aa7.5□□□□□ -1.21
CKAP5-212ENST00000533413 SYCP2Q9BX26 1530 aa7.5□□□□□ -1.21
CKAP5-212ENST00000533413 MYOM3Q5VTT5 1437 aa7.5□□□□□ -1.21
CKAP5-212ENST00000533413 KCTD17Q8N5Z5 321 aa7.5□□□□□ -1.21
CKAP5-212ENST00000533413 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.5□□□□□ -1.21
CKAP5-212ENST00000533413 CAMSAP2Q08AD1 1489 aa7.5□□□□□ -1.21
CKAP5-212ENST00000533413 DHX57Q6P158 1386 aaKnown RBP7.5□□□□□ -1.21
CKAP5-212ENST00000533413 PKD2Q13563 968 aa7.5□□□□□ -1.21
CKAP5-212ENST00000533413 DIP2CQ9Y2E4 1556 aa7.49□□□□□ -1.21
CKAP5-212ENST00000533413 KIDINS220Q9ULH0 1771 aa7.49□□□□□ -1.21
CKAP5-212ENST00000533413 TCOF1Q13428 1488 aaKnown RBP7.49□□□□□ -1.21
CKAP5-212ENST00000533413 BCORL1Q5H9F3 1711 aa7.49□□□□□ -1.21
CKAP5-212ENST00000533413 PIAS4Q8N2W9 510 aaPredicted RBP7.48□□□□□ -1.21
CKAP5-212ENST00000533413 CFDP1Q9UEE9 299 aaPredicted RBP7.48□□□□□ -1.21
CKAP5-212ENST00000533413 RTEL1-TNFRSF6BF6WH68 1400 aa7.48□□□□□ -1.21
CKAP5-212ENST00000533413 C9orf84Q5VXU9 1444 aa7.48□□□□□ -1.21
CKAP5-212ENST00000533413 ABCA6Q8N139 1617 aa7.48□□□□□ -1.21
CKAP5-212ENST00000533413 PTPN23Q9H3S7 1636 aa7.48□□□□□ -1.21
CKAP5-212ENST00000533413 ATP7AQ04656 1500 aa7.48□□□□□ -1.21
CKAP5-212ENST00000533413 ATP10AO60312 1499 aa7.48□□□□□ -1.21
CKAP5-212ENST00000533413 CCDC141Q6ZP82 1450 aa7.48□□□□□ -1.21
CKAP5-212ENST00000533413 PRDM10Q9NQV6 1147 aa7.48□□□□□ -1.21
CKAP5-212ENST00000533413 AGLP35573 1532 aa7.48□□□□□ -1.21
CKAP5-212ENST00000533413 ARHGEF12Q9NZN5 1544 aa7.47□□□□□ -1.21
CKAP5-212ENST00000533413 FAM135AQ9P2D6 1515 aa7.47□□□□□ -1.21
CKAP5-212ENST00000533413 SHANK2Q9UPX8 1470 aa7.47□□□□□ -1.21
CKAP5-212ENST00000533413 PLXNC1O60486 1568 aa7.47□□□□□ -1.21
CKAP5-212ENST00000533413 ZNF526Q8TF50 670 aaPredicted RBP7.47□□□□□ -1.21
CKAP5-212ENST00000533413 FOXD4L1Q9NU39 408 aa7.47□□□□□ -1.21
CKAP5-212ENST00000533413 ADAMTSL3P82987 1691 aa7.47□□□□□ -1.21
CKAP5-212ENST00000533413 CERS3Q8IU89 383 aa7.46□□□□□ -1.21
CKAP5-212ENST00000533413 RSPH6AQ9H0K4 717 aa7.46□□□□□ -1.21
CKAP5-212ENST00000533413 USP35Q9P2H5 1018 aa7.46□□□□□ -1.21
CKAP5-212ENST00000533413 DNMT1P26358 1616 aaKnown RBP7.46□□□□□ -1.21
CKAP5-212ENST00000533413 MBD5Q9P267 1494 aa7.46□□□□□ -1.21
CKAP5-212ENST00000533413 EIF2AK4Q9P2K8 1649 aaKnown RBP7.46□□□□□ -1.22
CKAP5-212ENST00000533413 ITGAEP38570 1179 aa7.46□□□□□ -1.22
CKAP5-212ENST00000533413 TRAPPC8Q9Y2L5 1435 aa7.45□□□□□ -1.22
CKAP5-212ENST00000533413 FGD6Q6ZV73 1430 aa7.45□□□□□ -1.22
CKAP5-212ENST00000533413 ZNF326Q5BKZ1 582 aaKnown RBP7.45□□□□□ -1.22
CKAP5-212ENST00000533413 KANK4Q5T7N3 995 aaPredicted RBP7.45□□□□□ -1.22
CKAP5-212ENST00000533413 TICAM2Q86XR7 235 aa7.45□□□□□ -1.22
CKAP5-212ENST00000533413 FER1L4A9Z1Z3 1794 aa7.45□□□□□ -1.22
CKAP5-212ENST00000533413 MROH2AA6NES4 1674 aa7.45□□□□□ -1.22
CKAP5-212ENST00000533413 RAPGEF3O95398 923 aa7.44□□□□□ -1.22
CKAP5-212ENST00000533413 BBXQ8WY36 941 aaPredicted RBP7.44□□□□□ -1.22
CKAP5-212ENST00000533413 FAM177A1Q8N128 213 aaPredicted RBP7.44□□□□□ -1.22
CKAP5-212ENST00000533413 RGS22Q8NE09 1264 aa7.44□□□□□ -1.22
CKAP5-212ENST00000533413 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.44□□□□□ -1.22
CKAP5-212ENST00000533413 ZMYND15Q9H091 742 aa7.43□□□□□ -1.22
CKAP5-212ENST00000533413 PPP4R3CPQ6ZMV5 832 aa7.43□□□□□ -1.22
CKAP5-212ENST00000533413 YEATS2Q9ULM3 1422 aa7.43□□□□□ -1.22
CKAP5-212ENST00000533413 SIGLEC1Q9BZZ2 1709 aa7.43□□□□□ -1.22
CKAP5-212ENST00000533413 SPAG9O60271 1321 aaKnown RBP7.43□□□□□ -1.22
CKAP5-212ENST00000533413 ZC3H13Q5T200 1668 aaKnown RBP7.42□□□□□ -1.22
CKAP5-212ENST00000533413 ZNF777Q9ULD5 760 aaPredicted RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 231.5 ms