RNA–Protein interactions for RNA: ENST00000532678.1

PUM1-223, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 4

Gene PUM1, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-223ENST00000532678 EFCAB2Q5VUJ9 269 aa12.93□□□□□ -0.34
PUM1-223ENST00000532678 CDK11AQ9UQ88 783 aaPredicted RBP12.93□□□□□ -0.34
PUM1-223ENST00000532678 CCDC18Q5T9S5 1454 aa12.92□□□□□ -0.34
PUM1-223ENST00000532678 HSPA2P54652 639 aa12.92□□□□□ -0.34
PUM1-223ENST00000532678 KLHL34Q8N239 644 aa12.92□□□□□ -0.34
PUM1-223ENST00000532678 AFAP1Q8N556 730 aa12.91□□□□□ -0.34
PUM1-223ENST00000532678 FYCO1Q9BQS8 1478 aa12.91□□□□□ -0.34
PUM1-223ENST00000532678 TRAPPC8Q9Y2L5 1435 aa12.9□□□□□ -0.34
PUM1-223ENST00000532678 SPOCK2Q92563 424 aa12.9□□□□□ -0.34
PUM1-223ENST00000532678 NUBP1P53384 320 aa12.88□□□□□ -0.35
PUM1-223ENST00000532678 MYT1LQ9UL68 1186 aa12.88□□□□□ -0.35
PUM1-223ENST00000532678 SAMD9LQ8IVG5 1584 aa12.88□□□□□ -0.35
PUM1-223ENST00000532678 PREX1Q8TCU6 1659 aa12.88□□□□□ -0.35
PUM1-223ENST00000532678 KIDINS220Q9ULH0 1771 aa12.87□□□□□ -0.35
PUM1-223ENST00000532678 SYCP2Q9BX26 1530 aa12.87□□□□□ -0.35
PUM1-223ENST00000532678 CEBPAP49715 358 aaPredicted RBP12.86□□□□□ -0.35
PUM1-223ENST00000532678 REREQ9P2R6 1566 aa12.86□□□□□ -0.35
PUM1-223ENST00000532678 C19orf67A6NJJ6 358 aa12.85□□□□□ -0.35
PUM1-223ENST00000532678 C3P01024 1663 aa12.85□□□□□ -0.35
PUM1-223ENST00000532678 MLH3Q9UHC1 1453 aa12.85□□□□□ -0.35
PUM1-223ENST00000532678 ZNF777Q9ULD5 760 aaPredicted RBP12.83□□□□□ -0.36
PUM1-223ENST00000532678 FBXO41Q8TF61 875 aa12.82□□□□□ -0.36
PUM1-223ENST00000532678 GPATCH8Q9UKJ3 1502 aaKnown RBP12.82□□□□□ -0.36
PUM1-223ENST00000532678 SUPT6HQ7KZ85 1726 aaKnown RBP12.81□□□□□ -0.36
PUM1-223ENST00000532678 STRCQ7RTU9 1775 aa12.8□□□□□ -0.36
PUM1-223ENST00000532678 AGLP35573 1532 aa12.8□□□□□ -0.36
PUM1-223ENST00000532678 TIAM1Q13009 1591 aa12.8□□□□□ -0.36
PUM1-223ENST00000532678 INO80Q9ULG1 1556 aaPredicted RBP12.79□□□□□ -0.36
PUM1-223ENST00000532678 ATP7AQ04656 1500 aa12.78□□□□□ -0.36
PUM1-223ENST00000532678 RASEFQ8IZ41 740 aa12.78□□□□□ -0.36
PUM1-223ENST00000532678 VPS8Q8N3P4 1428 aa12.78□□□□□ -0.36
PUM1-223ENST00000532678 HNRNPMP52272 730 aaKnown RBP eCLIP12.77□□□□□ -0.378e-13■■■■□ 19.8
PUM1-223ENST00000532678 MTUS2Q5JR59 1369 aa12.77□□□□□ -0.37
PUM1-223ENST00000532678 UHRF1BP1Q6BDS2 1440 aa12.77□□□□□ -0.37
PUM1-223ENST00000532678 EHBP1L1Q8N3D4 1523 aa12.77□□□□□ -0.37
PUM1-223ENST00000532678 CD44P16070 742 aaKnown RBP12.76□□□□□ -0.37
PUM1-223ENST00000532678 CCNB3Q8WWL7 1395 aa12.76□□□□□ -0.37
PUM1-223ENST00000532678 CLTCQ00610 1675 aaKnown RBP12.76□□□□□ -0.37
PUM1-223ENST00000532678 PLXNC1O60486 1568 aa12.75□□□□□ -0.37
PUM1-223ENST00000532678 FAM212AQ96EL1 285 aa12.75□□□□□ -0.37
PUM1-223ENST00000532678 SPAG9O60271 1321 aaKnown RBP12.74□□□□□ -0.37
PUM1-223ENST00000532678 HAX1O00165 279 aa12.74□□□□□ -0.37
PUM1-223ENST00000532678 PAK3O75914 559 aaPredicted RBP12.74□□□□□ -0.37
PUM1-223ENST00000532678 GSE1Q14687 1217 aa12.74□□□□□ -0.37
PUM1-223ENST00000532678 MROH2AA6NES4 1674 aa12.73□□□□□ -0.37
PUM1-223ENST00000532678 CFDP1Q9UEE9 299 aaPredicted RBP12.73□□□□□ -0.37
PUM1-223ENST00000532678 ZNF644Q9H582 1327 aaPredicted RBP12.72□□□□□ -0.37
PUM1-223ENST00000532678 ADGBQ8N7X0 1667 aa12.72□□□□□ -0.37
PUM1-223ENST00000532678 SETD1BQ9UPS6 1966 aaKnown RBP12.72□□□□□ -0.37
PUM1-223ENST00000532678 A2MP01023 1474 aa12.72□□□□□ -0.37
PUM1-223ENST00000532678 PLEKHH2Q8IVE3 1493 aa12.72□□□□□ -0.37
PUM1-223ENST00000532678 ESF1Q9H501 851 aaKnown RBP12.71□□□□□ -0.37
PUM1-223ENST00000532678 KIAA1107Q9UPP5 1409 aa12.71□□□□□ -0.38
PUM1-223ENST00000532678 MYO3AQ8NEV4 1616 aa12.7□□□□□ -0.38
PUM1-223ENST00000532678 CERKQ8TCT0 537 aa12.7□□□□□ -0.38
PUM1-223ENST00000532678 CNTLNQ9NXG0 1405 aa12.7□□□□□ -0.38
PUM1-223ENST00000532678 MBD5Q9P267 1494 aa12.68□□□□□ -0.38
PUM1-223ENST00000532678 CCDC61Q9Y6R9 512 aa12.68□□□□□ -0.38
PUM1-223ENST00000532678 CAMSAP2Q08AD1 1489 aa12.67□□□□□ -0.38
PUM1-223ENST00000532678 NCOA2Q15596 1464 aa12.67□□□□□ -0.38
PUM1-223ENST00000532678 CAMSAP1Q5T5Y3 1602 aa12.67□□□□□ -0.38
PUM1-223ENST00000532678 ZNF579Q8NAF0 562 aaKnown RBP12.67□□□□□ -0.38
PUM1-223ENST00000532678 NCOA1Q15788 1441 aa12.67□□□□□ -0.38
PUM1-223ENST00000532678 ZNF142P52746 1687 aaPredicted RBP12.67□□□□□ -0.38
PUM1-223ENST00000532678 CLCN6P51797 869 aa12.66□□□□□ -0.38
PUM1-223ENST00000532678 DCAF8Q5TAQ9 597 aa12.66□□□□□ -0.38
PUM1-223ENST00000532678 ZRANB1Q9UGI0 708 aa12.66□□□□□ -0.38
PUM1-223ENST00000532678 ZMYM3Q14202 1370 aa12.66□□□□□ -0.38
PUM1-223ENST00000532678 GGT6Q6P531 493 aa12.65□□□□□ -0.38
PUM1-223ENST00000532678 TSPYL2Q9H2G4 693 aaPredicted RBP12.65□□□□□ -0.38
PUM1-223ENST00000532678 CEP170BQ9Y4F5 1589 aaPredicted RBP12.64□□□□□ -0.39
PUM1-223ENST00000532678 NPATQ14207 1427 aa12.64□□□□□ -0.39
PUM1-223ENST00000532678 MAP3K1Q13233 1512 aa12.64□□□□□ -0.39
PUM1-223ENST00000532678 CHRM1P11229 460 aaPredicted RBP12.64□□□□□ -0.39
PUM1-223ENST00000532678 CCDC141Q6ZP82 1450 aa12.64□□□□□ -0.39
PUM1-223ENST00000532678 PTPRTO14522 1441 aa12.63□□□□□ -0.39
PUM1-223ENST00000532678 PTPRKQ15262 1439 aa12.63□□□□□ -0.39
PUM1-223ENST00000532678 LTBP4Q8N2S1 1624 aa12.63□□□□□ -0.39
PUM1-223ENST00000532678 EVX2Q03828 476 aa12.63□□□□□ -0.39
PUM1-223ENST00000532678 AMER1Q5JTC6 1135 aaPredicted RBP12.63□□□□□ -0.39
PUM1-223ENST00000532678 LRRC9Q6ZRR7 1453 aa12.61□□□□□ -0.39
PUM1-223ENST00000532678 CIZ1Q9ULV3 898 aaPredicted RBP12.61□□□□□ -0.39
PUM1-223ENST00000532678 NCKAP5LQ9HCH0 1330 aa12.61□□□□□ -0.39
PUM1-223ENST00000532678 RTEL1-TNFRSF6BF6WH68 1400 aa12.6□□□□□ -0.39
PUM1-223ENST00000532678 PKD2Q13563 968 aa12.59□□□□□ -0.39
PUM1-223ENST00000532678 ARHGEF5Q12774 1597 aa12.59□□□□□ -0.39
PUM1-223ENST00000532678 DHX29Q7Z478 1369 aaKnown RBP12.58□□□□□ -0.4
PUM1-223ENST00000532678 KDM5DQ9BY66 1539 aa12.58□□□□□ -0.4
PUM1-223ENST00000532678 SGIP1Q9BQI5 828 aa12.57□□□□□ -0.4
PUM1-223ENST00000532678 DNMT1P26358 1616 aaKnown RBP12.57□□□□□ -0.4
PUM1-223ENST00000532678 KIF3BO15066 747 aa12.56□□□□□ -0.4
PUM1-223ENST00000532678 PLA2R1Q13018 1463 aa12.56□□□□□ -0.4
PUM1-223ENST00000532678 TCOF1Q13428 1488 aaKnown RBP12.56□□□□□ -0.4
PUM1-223ENST00000532678 POLR1AO95602 1720 aaPredicted RBP12.56□□□□□ -0.4
PUM1-223ENST00000532678 ZNF335Q9H4Z2 1342 aaPredicted RBP12.56□□□□□ -0.4
PUM1-223ENST00000532678 A2ML1A8K2U0 1454 aa12.55□□□□□ -0.4
PUM1-223ENST00000532678 KANK4Q5T7N3 995 aaPredicted RBP12.55□□□□□ -0.4
PUM1-223ENST00000532678 KIF12Q96FN5 646 aa12.55□□□□□ -0.4
PUM1-223ENST00000532678 FBXO31Q5XUX0 539 aaPredicted RBP12.54□□□□□ -0.4
PUM1-223ENST00000532678 NEURL4Q96JN8 1562 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms