RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 ERBINQ96RT1 1412 aa17.47■□□□□ 0.39
CHD7-211ENST00000532149 ABCC1P33527 1531 aa17.47■□□□□ 0.39
CHD7-211ENST00000532149 PZPP20742 1482 aa17.47■□□□□ 0.39
CHD7-211ENST00000532149 CFAP74Q9C0B2 1584 aa17.46■□□□□ 0.39
CHD7-211ENST00000532149 NUP155O75694 1391 aa17.44■□□□□ 0.38
CHD7-211ENST00000532149 ASXL2Q76L83 1435 aa17.44■□□□□ 0.38
CHD7-211ENST00000532149 UNC13BO14795 1591 aa17.42■□□□□ 0.38
CHD7-211ENST00000532149 FANCAO15360 1455 aa17.4■□□□□ 0.38
CHD7-211ENST00000532149 PKD2Q13563 968 aa17.38■□□□□ 0.37
CHD7-211ENST00000532149 SPAG9O60271 1321 aaKnown RBP17.38■□□□□ 0.37
CHD7-211ENST00000532149 CENPBP07199 599 aaPredicted RBP17.37■□□□□ 0.37
CHD7-211ENST00000532149 MAGI2Q86UL8 1455 aa17.37■□□□□ 0.37
CHD7-211ENST00000532149 ARHGEF12Q9NZN5 1544 aa17.37■□□□□ 0.37
CHD7-211ENST00000532149 IQGAP3Q86VI3 1631 aa17.36■□□□□ 0.37
CHD7-211ENST00000532149 STAC3Q96MF2 364 aa17.35■□□□□ 0.37
CHD7-211ENST00000532149 ATP10AO60312 1499 aa17.35■□□□□ 0.37
CHD7-211ENST00000532149 FAM135AQ9P2D6 1515 aa17.35■□□□□ 0.37
CHD7-211ENST00000532149 TEX14Q8IWB6 1497 aa17.33■□□□□ 0.37
CHD7-211ENST00000532149 L3MBTL2Q969R5 705 aa17.33■□□□□ 0.36
CHD7-211ENST00000532149 EIF2AK4Q9P2K8 1649 aaKnown RBP17.32■□□□□ 0.36
CHD7-211ENST00000532149 ADGRL1O94910 1474 aa17.32■□□□□ 0.36
CHD7-211ENST00000532149 ZNF518AQ6AHZ1 1483 aa17.32■□□□□ 0.36
CHD7-211ENST00000532149 NEO1Q92859 1461 aa17.32■□□□□ 0.36
CHD7-211ENST00000532149 EIF4G2P78344 907 aaKnown RBP eCLIP17.32■□□□□ 0.36
CHD7-211ENST00000532149 ZFYVE16Q7Z3T8 1539 aa17.31■□□□□ 0.36
CHD7-211ENST00000532149 CD109Q6YHK3 1445 aa17.3■□□□□ 0.36
CHD7-211ENST00000532149 TRAPPC8Q9Y2L5 1435 aa17.3■□□□□ 0.36
CHD7-211ENST00000532149 INO80Q9ULG1 1556 aaPredicted RBP17.3■□□□□ 0.36
CHD7-211ENST00000532149 UHRF1BP1Q6BDS2 1440 aa17.3■□□□□ 0.36
CHD7-211ENST00000532149 KANK1Q14678 1352 aa17.29■□□□□ 0.36
CHD7-211ENST00000532149 ATP7AQ04656 1500 aa17.29■□□□□ 0.36
CHD7-211ENST00000532149 SCAPERQ9BY12 1400 aa17.29■□□□□ 0.36
CHD7-211ENST00000532149 GLI2P10070 1586 aa17.28■□□□□ 0.36
CHD7-211ENST00000532149 DHX29Q7Z478 1369 aaKnown RBP17.27■□□□□ 0.35
CHD7-211ENST00000532149 ARID4BQ4LE39 1312 aaPredicted RBP17.26■□□□□ 0.35
CHD7-211ENST00000532149 MIER1Q8N108 512 aa17.26■□□□□ 0.35
CHD7-211ENST00000532149 RBM42Q9BTD8 480 aaKnown RBP17.26■□□□□ 0.35
CHD7-211ENST00000532149 CCDC144AA2RUR9 1427 aa17.26■□□□□ 0.35
CHD7-211ENST00000532149 DEPDC5O75140 1603 aa17.25■□□□□ 0.35
CHD7-211ENST00000532149 MLH3Q9UHC1 1453 aa17.25■□□□□ 0.35
CHD7-211ENST00000532149 AFAP1Q8N556 730 aa17.22■□□□□ 0.35
CHD7-211ENST00000532149 KDM5CP41229 1560 aa17.22■□□□□ 0.35
CHD7-211ENST00000532149 NEURL4Q96JN8 1562 aa17.21■□□□□ 0.35
CHD7-211ENST00000532149 POGZQ7Z3K3 1410 aa17.2■□□□□ 0.34
CHD7-211ENST00000532149 VWDEQ8N2E2 1590 aa17.19■□□□□ 0.34
CHD7-211ENST00000532149 TET3O43151 1660 aa17.18■□□□□ 0.34
CHD7-211ENST00000532149 CCER2I3L3R5 266 aa17.18■□□□□ 0.34
CHD7-211ENST00000532149 BCORL1Q5H9F3 1711 aa17.18■□□□□ 0.34
CHD7-211ENST00000532149 RALGAPBQ86X10 1494 aa17.18■□□□□ 0.34
CHD7-211ENST00000532149 PRDM15P57071 1507 aaPredicted RBP17.17■□□□□ 0.34
CHD7-211ENST00000532149 SPATA31E1Q6ZUB1 1445 aa17.16■□□□□ 0.34
CHD7-211ENST00000532149 ANP32CO43423 234 aa17.16■□□□□ 0.34
CHD7-211ENST00000532149 HSPA5P11021 654 aaKnown RBP17.16■□□□□ 0.34
CHD7-211ENST00000532149 RIMBP3CA6NJZ7 1639 aa17.16■□□□□ 0.34
CHD7-211ENST00000532149 RIMBP3BA6NNM3 1639 aa17.16■□□□□ 0.34
CHD7-211ENST00000532149 RIMBP3Q9UFD9 1639 aa17.16■□□□□ 0.34
CHD7-211ENST00000532149 MAP3K4Q9Y6R4 1608 aa17.16■□□□□ 0.34
CHD7-211ENST00000532149 LMTK2Q8IWU2 1503 aa17.16■□□□□ 0.34
CHD7-211ENST00000532149 POLR1AO95602 1720 aaPredicted RBP17.16■□□□□ 0.34
CHD7-211ENST00000532149 HECW2Q9P2P5 1572 aa17.15■□□□□ 0.34
CHD7-211ENST00000532149 PTPRTO14522 1441 aa17.15■□□□□ 0.34
CHD7-211ENST00000532149 KIDINS220Q9ULH0 1771 aa17.15■□□□□ 0.34
CHD7-211ENST00000532149 A2MP01023 1474 aa17.14■□□□□ 0.33
CHD7-211ENST00000532149 DDX10Q13206 875 aaKnown RBP17.14■□□□□ 0.33
CHD7-211ENST00000532149 TRPM2O94759 1503 aa17.13■□□□□ 0.33
CHD7-211ENST00000532149 NBPF8Q3BBV2 869 aa17.13■□□□□ 0.33
CHD7-211ENST00000532149 MYT1LQ9UL68 1186 aa17.13■□□□□ 0.33
CHD7-211ENST00000532149 RNF17Q9BXT8 1623 aaKnown RBP17.13■□□□□ 0.33
CHD7-211ENST00000532149 SLC24A1O60721 1099 aa17.12■□□□□ 0.33
CHD7-211ENST00000532149 ROCK2O75116 1388 aaKnown RBP17.12■□□□□ 0.33
CHD7-211ENST00000532149 PLA2R1Q13018 1463 aa17.12■□□□□ 0.33
CHD7-211ENST00000532149 LAMC1P11047 1609 aa17.11■□□□□ 0.33
CHD7-211ENST00000532149 KIF3BO15066 747 aa17.1■□□□□ 0.33
CHD7-211ENST00000532149 CYB5RLQ6IPT4 315 aa17.1■□□□□ 0.33
CHD7-211ENST00000532149 ATXN8OSP0DMR3 200 aa17.09■□□□□ 0.33
CHD7-211ENST00000532149 SPHKAPQ2M3C7 1700 aa17.08■□□□□ 0.32
CHD7-211ENST00000532149 DCAF11Q8TEB1 546 aa17.08■□□□□ 0.32
CHD7-211ENST00000532149 E9PCH4 1651 aa17.07■□□□□ 0.32
CHD7-211ENST00000532149 GPRASP1Q5JY77 1395 aa17.07■□□□□ 0.32
CHD7-211ENST00000532149 PRAG1Q86YV5 1406 aa17.06■□□□□ 0.32
CHD7-211ENST00000532149 USP47Q96K76 1375 aa17.06■□□□□ 0.32
CHD7-211ENST00000532149 CCDC7Q96M83 1385 aa17.06■□□□□ 0.32
CHD7-211ENST00000532149 CEP152O94986 1710 aa17.05■□□□□ 0.32
CHD7-211ENST00000532149 CARD11Q9BXL7 1154 aa17.05■□□□□ 0.32
CHD7-211ENST00000532149 ZBTB12Q9Y330 459 aaPredicted RBP17.05■□□□□ 0.32
CHD7-211ENST00000532149 EFCAB6Q5THR3 1501 aa17.05■□□□□ 0.32
CHD7-211ENST00000532149 WASHC2AQ641Q2 1341 aa17.04■□□□□ 0.32
CHD7-211ENST00000532149 ZMYM4Q5VZL5 1548 aa17.04■□□□□ 0.32
CHD7-211ENST00000532149 CNTLNQ9NXG0 1405 aa17.04■□□□□ 0.32
CHD7-211ENST00000532149 MROH1Q8NDA8 1641 aa17.03■□□□□ 0.32
CHD7-211ENST00000532149 RICTORQ6R327 1708 aa17.03■□□□□ 0.32
CHD7-211ENST00000532149 DIP2BQ9P265 1576 aa17.02■□□□□ 0.32
CHD7-211ENST00000532149 TRPM1Q7Z4N2 1603 aa17.02■□□□□ 0.31
CHD7-211ENST00000532149 ZC3H13Q5T200 1668 aaKnown RBP17.01■□□□□ 0.31
CHD7-211ENST00000532149 ARHGAP31Q2M1Z3 1444 aa17■□□□□ 0.31
CHD7-211ENST00000532149 REREQ9P2R6 1566 aa17■□□□□ 0.31
CHD7-211ENST00000532149 KIAA1210Q9ULL0 1709 aa16.99■□□□□ 0.31
CHD7-211ENST00000532149 KTN1Q86UP2 1357 aaKnown RBP16.99■□□□□ 0.31
CHD7-211ENST00000532149 FAM69CQ0P6D2 419 aa16.98■□□□□ 0.31
CHD7-211ENST00000532149 RPGRIP1LQ68CZ1 1315 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms