RNA–Protein interactions for RNA: ENST00000531657.1

PPFIA1-219, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 2

Gene PPFIA1, Length 3,036 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-219ENST00000531657 TRAPPC8Q9Y2L5 1435 aa12.9□□□□□ -0.34
PPFIA1-219ENST00000531657 KDM5BQ9UGL1 1544 aa12.89□□□□□ -0.35
PPFIA1-219ENST00000531657 NPM2Q86SE8 214 aaKnown RBP12.88□□□□□ -0.35
PPFIA1-219ENST00000531657 PLEKHG5O94827 1062 aa12.88□□□□□ -0.35
PPFIA1-219ENST00000531657 OSCARQ8IYS5 282 aa12.88□□□□□ -0.35
PPFIA1-219ENST00000531657 MYT1Q01538 1121 aa12.87□□□□□ -0.35
PPFIA1-219ENST00000531657 DNMT1P26358 1616 aaKnown RBP12.86□□□□□ -0.35
PPFIA1-219ENST00000531657 TEX14Q8IWB6 1497 aa12.86□□□□□ -0.35
PPFIA1-219ENST00000531657 RBM19Q9Y4C8 960 aaKnown RBP12.86□□□□□ -0.35
PPFIA1-219ENST00000531657 CCDC136Q96JN2 1154 aa12.85□□□□□ -0.35
PPFIA1-219ENST00000531657 KNSTRNQ9Y448 316 aa12.84□□□□□ -0.35
PPFIA1-219ENST00000531657 CCDC141Q6ZP82 1450 aa12.84□□□□□ -0.35
PPFIA1-219ENST00000531657 STAG3Q9UJ98 1225 aa12.83□□□□□ -0.35
PPFIA1-219ENST00000531657 ABCC10Q5T3U5 1492 aa12.82□□□□□ -0.36
PPFIA1-219ENST00000531657 DISP3Q9P2K9 1392 aa12.82□□□□□ -0.36
PPFIA1-219ENST00000531657 TMF1P82094 1093 aa12.82□□□□□ -0.36
PPFIA1-219ENST00000531657 WASHC2CQ9Y4E1 1318 aa12.82□□□□□ -0.36
PPFIA1-219ENST00000531657 RRP7AQ9Y3A4 280 aaKnown RBP12.81□□□□□ -0.36
PPFIA1-219ENST00000531657 ERICH6Q7L0X2 663 aa12.81□□□□□ -0.36
PPFIA1-219ENST00000531657 MBD5Q9P267 1494 aa12.81□□□□□ -0.36
PPFIA1-219ENST00000531657 NUTM2FA1L443 756 aa12.8□□□□□ -0.36
PPFIA1-219ENST00000531657 ARHGEF12Q9NZN5 1544 aa12.8□□□□□ -0.36
PPFIA1-219ENST00000531657 ADGRF5Q8IZF2 1346 aa12.8□□□□□ -0.36
PPFIA1-219ENST00000531657 CHD1O14646 1710 aa12.8□□□□□ -0.36
PPFIA1-219ENST00000531657 PPM1GO15355 546 aaPredicted RBP12.8□□□□□ -0.36
PPFIA1-219ENST00000531657 PNISRQ8TF01 805 aaKnown RBP12.8□□□□□ -0.36
PPFIA1-219ENST00000531657 TTC37Q6PGP7 1564 aa12.79□□□□□ -0.36
PPFIA1-219ENST00000531657 ABCA8O94911 1581 aa12.79□□□□□ -0.36
PPFIA1-219ENST00000531657 WDR43Q15061 677 aaKnown RBP eCLIP12.79□□□□□ -0.36
PPFIA1-219ENST00000531657 RSPH4AQ5TD94 716 aa12.78□□□□□ -0.36
PPFIA1-219ENST00000531657 GCC2Q8IWJ2 1684 aa12.77□□□□□ -0.36
PPFIA1-219ENST00000531657 ADAMTS8Q9UP79 889 aa12.77□□□□□ -0.37
PPFIA1-219ENST00000531657 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.76□□□□□ -0.37
PPFIA1-219ENST00000531657 EXOC6Q8TAG9 804 aa12.76□□□□□ -0.37
PPFIA1-219ENST00000531657 KTN1Q86UP2 1357 aaKnown RBP12.76□□□□□ -0.37
PPFIA1-219ENST00000531657 SOX12O15370 315 aa12.76□□□□□ -0.37
PPFIA1-219ENST00000531657 SAMD9LQ8IVG5 1584 aa12.76□□□□□ -0.37
PPFIA1-219ENST00000531657 DHX29Q7Z478 1369 aaKnown RBP12.76□□□□□ -0.37
PPFIA1-219ENST00000531657 FAM135AQ9P2D6 1515 aa12.76□□□□□ -0.37
PPFIA1-219ENST00000531657 FAM69CQ0P6D2 419 aa12.75□□□□□ -0.37
PPFIA1-219ENST00000531657 ZBED9Q6R2W3 1325 aa12.75□□□□□ -0.37
PPFIA1-219ENST00000531657 SPATA31E1Q6ZUB1 1445 aa12.75□□□□□ -0.37
PPFIA1-219ENST00000531657 SLC12A5Q9H2X9 1139 aa12.75□□□□□ -0.37
PPFIA1-219ENST00000531657 FBLN1P23142 703 aa12.75□□□□□ -0.37
PPFIA1-219ENST00000531657 FBXO31Q5XUX0 539 aaPredicted RBP12.75□□□□□ -0.37
PPFIA1-219ENST00000531657 ARID4BQ4LE39 1312 aaPredicted RBP12.74□□□□□ -0.37
PPFIA1-219ENST00000531657 MYBBP1AQ9BQG0 1328 aaKnown RBP12.74□□□□□ -0.37
PPFIA1-219ENST00000531657 CDC42BPAQ5VT25 1732 aa12.74□□□□□ -0.37
PPFIA1-219ENST00000531657 CFAP65Q6ZU64 1925 aaKnown RBP12.74□□□□□ -0.37
PPFIA1-219ENST00000531657 TESK2Q96S53 571 aa12.74□□□□□ -0.37
PPFIA1-219ENST00000531657 PPP4R2Q9NY27 417 aa12.74□□□□□ -0.37
PPFIA1-219ENST00000531657 NUDCQ9Y266 331 aa12.73□□□□□ -0.37
PPFIA1-219ENST00000531657 PLA2R1Q13018 1463 aa12.73□□□□□ -0.37
PPFIA1-219ENST00000531657 KANK1Q14678 1352 aa12.73□□□□□ -0.37
PPFIA1-219ENST00000531657 NLRP13Q86W25 1043 aa12.72□□□□□ -0.37
PPFIA1-219ENST00000531657 CABP2Q9NPB3 220 aa12.72□□□□□ -0.37
PPFIA1-219ENST00000531657 NBR1Q14596 966 aa12.72□□□□□ -0.37
PPFIA1-219ENST00000531657 BCL2L13Q9BXK5 485 aa12.72□□□□□ -0.37
PPFIA1-219ENST00000531657 FANCAO15360 1455 aa12.72□□□□□ -0.37
PPFIA1-219ENST00000531657 MINK1Q8N4C8 1332 aaPredicted RBP12.72□□□□□ -0.37
PPFIA1-219ENST00000531657 SRPK2P78362 688 aaKnown RBP12.71□□□□□ -0.37
PPFIA1-219ENST00000531657 UGGT1Q9NYU2 1555 aa12.71□□□□□ -0.37
PPFIA1-219ENST00000531657 PLCH2O75038 1416 aa12.71□□□□□ -0.37
PPFIA1-219ENST00000531657 ITSN2Q9NZM3 1697 aa12.71□□□□□ -0.38
PPFIA1-219ENST00000531657 ASXL2Q76L83 1435 aa12.7□□□□□ -0.38
PPFIA1-219ENST00000531657 APAF1O14727 1248 aa12.7□□□□□ -0.38
PPFIA1-219ENST00000531657 RCAN3Q9UKA8 241 aa12.7□□□□□ -0.38
PPFIA1-219ENST00000531657 ADGRL1O94910 1474 aa12.69□□□□□ -0.38
PPFIA1-219ENST00000531657 A2MP01023 1474 aa12.69□□□□□ -0.38
PPFIA1-219ENST00000531657 BCORL1Q5H9F3 1711 aa12.69□□□□□ -0.38
PPFIA1-219ENST00000531657 C20orf194Q5TEA3 1177 aa12.69□□□□□ -0.38
PPFIA1-219ENST00000531657 FRAT1Q92837 279 aaPredicted RBP12.68□□□□□ -0.38
PPFIA1-219ENST00000531657 ABCC2Q92887 1545 aa12.68□□□□□ -0.38
PPFIA1-219ENST00000531657 ADGRL2O95490 1459 aa12.68□□□□□ -0.38
PPFIA1-219ENST00000531657 PRAG1Q86YV5 1406 aa12.68□□□□□ -0.38
PPFIA1-219ENST00000531657 U2SURPO15042 1029 aaKnown RBP12.68□□□□□ -0.38
PPFIA1-219ENST00000531657 RALBP1Q15311 655 aa12.67□□□□□ -0.38
PPFIA1-219ENST00000531657 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.67□□□□□ -0.38
PPFIA1-219ENST00000531657 CANXP27824 592 aaKnown RBP12.67□□□□□ -0.38
PPFIA1-219ENST00000531657 POGKQ9P215 609 aa12.67□□□□□ -0.38
PPFIA1-219ENST00000531657 PER1O15534 1290 aaPredicted RBP12.66□□□□□ -0.38
PPFIA1-219ENST00000531657 ERBINQ96RT1 1412 aa12.66□□□□□ -0.38
PPFIA1-219ENST00000531657 PPP2R1AP30153 589 aa12.66□□□□□ -0.38
PPFIA1-219ENST00000531657 RGS3P49796 1198 aa12.65□□□□□ -0.38
PPFIA1-219ENST00000531657 MORC1Q86VD1 984 aa12.65□□□□□ -0.38
PPFIA1-219ENST00000531657 GGNBP2Q9H3C7 697 aa12.65□□□□□ -0.38
PPFIA1-219ENST00000531657 CD109Q6YHK3 1445 aa12.64□□□□□ -0.39
PPFIA1-219ENST00000531657 CLUAP1Q96AJ1 413 aa12.64□□□□□ -0.39
PPFIA1-219ENST00000531657 ESF1Q9H501 851 aaKnown RBP12.64□□□□□ -0.39
PPFIA1-219ENST00000531657 CDC42BPBQ9Y5S2 1711 aa12.64□□□□□ -0.39
PPFIA1-219ENST00000531657 MSH5O43196 834 aa12.63□□□□□ -0.39
PPFIA1-219ENST00000531657 IDI1Q13907 227 aa12.63□□□□□ -0.39
PPFIA1-219ENST00000531657 CRBNQ96SW2 442 aa12.63□□□□□ -0.39
PPFIA1-219ENST00000531657 CARD14Q9BXL6 1004 aa12.62□□□□□ -0.39
PPFIA1-219ENST00000531657 LAS1LQ9Y4W2 734 aaKnown RBP12.62□□□□□ -0.39
PPFIA1-219ENST00000531657 RALGAPBQ86X10 1494 aa12.62□□□□□ -0.39
PPFIA1-219ENST00000531657 DMRT2Q9Y5R5 561 aa12.62□□□□□ -0.39
PPFIA1-219ENST00000531657 RRP1P56182 461 aaKnown RBP12.61□□□□□ -0.39
PPFIA1-219ENST00000531657 SPINK5Q9NQ38 1064 aaPredicted RBP12.61□□□□□ -0.39
PPFIA1-219ENST00000531657 TCERG1O14776 1098 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms