RNA–Protein interactions for RNA: ENST00000530131.5

RDX-209, Transcript of radixin, humanhuman

TSL 2

Gene RDX, Length 1,911 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-209ENST00000530131 ABCA6Q8N139 1617 aa22.19■■□□□ 1.14
RDX-209ENST00000530131 DHX29Q7Z478 1369 aaKnown RBP22.19■■□□□ 1.14
RDX-209ENST00000530131 PKD2Q13563 968 aa22.18■■□□□ 1.14
RDX-209ENST00000530131 RAPGEF3O95398 923 aa22.16■■□□□ 1.14
RDX-209ENST00000530131 ZMYM4Q5VZL5 1548 aa22.16■■□□□ 1.14
RDX-209ENST00000530131 RPRD2Q5VT52 1461 aaKnown RBP22.15■■□□□ 1.14
RDX-209ENST00000530131 A2MP01023 1474 aa22.15■■□□□ 1.14
RDX-209ENST00000530131 MROH1Q8NDA8 1641 aa22.14■■□□□ 1.14
RDX-209ENST00000530131 DIP2CQ9Y2E4 1556 aa22.14■■□□□ 1.13
RDX-209ENST00000530131 VWDEQ8N2E2 1590 aa22.13■■□□□ 1.13
RDX-209ENST00000530131 BCORL1Q5H9F3 1711 aa22.13■■□□□ 1.13
RDX-209ENST00000530131 TONSLQ96HA7 1378 aa22.13■■□□□ 1.13
RDX-209ENST00000530131 PRDM15P57071 1507 aaPredicted RBP22.12■■□□□ 1.13
RDX-209ENST00000530131 MYT1LQ9UL68 1186 aa22.12■■□□□ 1.13
RDX-209ENST00000530131 RNF17Q9BXT8 1623 aaKnown RBP22.11■■□□□ 1.13
RDX-209ENST00000530131 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.09■■□□□ 1.136e-8■■■□□ 16.9
RDX-209ENST00000530131 PPP1R15AO75807 674 aaPredicted RBP22.08■■□□□ 1.12
RDX-209ENST00000530131 DNAJC5Q9H3Z4 198 aa22.07■■□□□ 1.12
RDX-209ENST00000530131 TET3O43151 1660 aa22.06■■□□□ 1.12
RDX-209ENST00000530131 YEATS2Q9ULM3 1422 aa22.06■■□□□ 1.12
RDX-209ENST00000530131 KIF3BO15066 747 aa22.05■■□□□ 1.12
RDX-209ENST00000530131 E9PCH4 1651 aa22.05■■□□□ 1.12
RDX-209ENST00000530131 PLA2R1Q13018 1463 aa22.03■■□□□ 1.12
RDX-209ENST00000530131 COL17A1Q9UMD9 1497 aaPredicted RBP22.03■■□□□ 1.12
RDX-209ENST00000530131 ATP10AO60312 1499 aa22.02■■□□□ 1.12
RDX-209ENST00000530131 LMTK2Q8IWU2 1503 aa22■■□□□ 1.11
RDX-209ENST00000530131 KANK1Q14678 1352 aa22■■□□□ 1.11
RDX-209ENST00000530131 ZNF316A6NFI3 1004 aaPredicted RBP21.98■■□□□ 1.11
RDX-209ENST00000530131 REREQ9P2R6 1566 aa21.98■■□□□ 1.11
RDX-209ENST00000530131 L3MBTL2Q969R5 705 aa21.98■■□□□ 1.11
RDX-209ENST00000530131 CEP152O94986 1710 aa21.98■■□□□ 1.11
RDX-209ENST00000530131 EFCAB6Q5THR3 1501 aa21.96■■□□□ 1.11
RDX-209ENST00000530131 SPHKAPQ2M3C7 1700 aa21.95■■□□□ 1.1
RDX-209ENST00000530131 ARHGEF40Q8TER5 1519 aa21.94■■□□□ 1.1
RDX-209ENST00000530131 CCDC144AA2RUR9 1427 aa21.93■■□□□ 1.1
RDX-209ENST00000530131 PTPRTO14522 1441 aa21.93■■□□□ 1.1
RDX-209ENST00000530131 TRPM2O94759 1503 aa21.93■■□□□ 1.1
RDX-209ENST00000530131 ABCC3O15438 1527 aa21.92■■□□□ 1.1
RDX-209ENST00000530131 AGLP35573 1532 aa21.9■■□□□ 1.1
RDX-209ENST00000530131 SIGLEC1Q9BZZ2 1709 aa21.89■■□□□ 1.1
RDX-209ENST00000530131 ZC3H13Q5T200 1668 aaKnown RBP21.89■■□□□ 1.09
RDX-209ENST00000530131 CAMSAP1Q5T5Y3 1602 aa21.87■■□□□ 1.09
RDX-209ENST00000530131 GGT6Q6P531 493 aa21.86■■□□□ 1.09
RDX-209ENST00000530131 CLTCL1P53675 1640 aa21.86■■□□□ 1.09
RDX-209ENST00000530131 NPATQ14207 1427 aa21.83■■□□□ 1.09
RDX-209ENST00000530131 NBPF8Q3BBV2 869 aa21.83■■□□□ 1.09
RDX-209ENST00000530131 UHRF1BP1Q6BDS2 1440 aa21.83■■□□□ 1.08
RDX-209ENST00000530131 SPATA31E1Q6ZUB1 1445 aa21.81■■□□□ 1.08
RDX-209ENST00000530131 TRHP20396 242 aaPredicted RBP21.8■■□□□ 1.08
RDX-209ENST00000530131 WASHC2CQ9Y4E1 1318 aa21.8■■□□□ 1.08
RDX-209ENST00000530131 ARHGAP31Q2M1Z3 1444 aa21.79■■□□□ 1.08
RDX-209ENST00000530131 NEURL4Q96JN8 1562 aa21.79■■□□□ 1.08
RDX-209ENST00000530131 UGGT1Q9NYU2 1555 aa21.77■■□□□ 1.08
RDX-209ENST00000530131 CFAP65Q6ZU64 1925 aaKnown RBP21.75■■□□□ 1.07
RDX-209ENST00000530131 CNTLNQ9NXG0 1405 aa21.75■■□□□ 1.07
RDX-209ENST00000530131 NOS1P29475 1434 aa21.74■■□□□ 1.07
RDX-209ENST00000530131 KIF1BO60333 1816 aa21.73■■□□□ 1.07
RDX-209ENST00000530131 DCAF11Q8TEB1 546 aa21.73■■□□□ 1.07
RDX-209ENST00000530131 RALGAPBQ86X10 1494 aa21.73■■□□□ 1.07
RDX-209ENST00000530131 DIEXFQ68CQ4 756 aaKnown RBP21.72■■□□□ 1.07
RDX-209ENST00000530131 PPP6R1Q9UPN7 881 aa21.72■■□□□ 1.07
RDX-209ENST00000530131 SYNMO15061 1565 aa21.72■■□□□ 1.07
RDX-209ENST00000530131 PRAG1Q86YV5 1406 aa21.71■■□□□ 1.07
RDX-209ENST00000530131 PIK3C2BO00750 1634 aa21.71■■□□□ 1.07
RDX-209ENST00000530131 RGL3Q3MIN7 710 aa21.7■■□□□ 1.07
RDX-209ENST00000530131 MROH2AA6NES4 1674 aa21.7■■□□□ 1.07
RDX-209ENST00000530131 CLTCQ00610 1675 aaKnown RBP21.7■■□□□ 1.06
RDX-209ENST00000530131 PREX1Q8TCU6 1659 aa21.69■■□□□ 1.06
RDX-209ENST00000530131 TRPM1Q7Z4N2 1603 aa21.69■■□□□ 1.06
RDX-209ENST00000530131 ADGRB3O60242 1522 aa21.69■■□□□ 1.06
RDX-209ENST00000530131 KDM2AQ9Y2K7 1162 aa21.68■■□□□ 1.06
RDX-209ENST00000530131 ZNF326Q5BKZ1 582 aaKnown RBP21.67■■□□□ 1.06
RDX-209ENST00000530131 IFT172Q9UG01 1749 aa21.66■■□□□ 1.06
RDX-209ENST00000530131 MADDQ8WXG6 1647 aa21.66■■□□□ 1.06
RDX-209ENST00000530131 HSPA5P11021 654 aaKnown RBP21.65■■□□□ 1.06
RDX-209ENST00000530131 HIRIP3Q9BW71 556 aaPredicted RBP21.65■■□□□ 1.06
RDX-209ENST00000530131 EIF4G2P78344 907 aaKnown RBP eCLIP21.63■■□□□ 1.05
RDX-209ENST00000530131 ERVK-7P63135 1459 aa21.62■■□□□ 1.05
RDX-209ENST00000530131 LAMC1P11047 1609 aa21.6■■□□□ 1.05
RDX-209ENST00000530131 MYOM2P54296 1465 aa21.6■■□□□ 1.05
RDX-209ENST00000530131 STAC3Q96MF2 364 aa21.6■■□□□ 1.05
RDX-209ENST00000530131 MLECQ14165 292 aa21.59■■□□□ 1.05
RDX-209ENST00000530131 SPATA31D1Q6ZQQ2 1576 aa21.59■■□□□ 1.05
RDX-209ENST00000530131 GPRASP1Q5JY77 1395 aa21.59■■□□□ 1.05
RDX-209ENST00000530131 PPLO60437 1756 aa21.58■■□□□ 1.05
RDX-209ENST00000530131 USP47Q96K76 1375 aa21.57■■□□□ 1.04
RDX-209ENST00000530131 NRXN1Q9ULB1 1477 aa21.56■■□□□ 1.04
RDX-209ENST00000530131 ROCK2O75116 1388 aaKnown RBP21.55■■□□□ 1.04
RDX-209ENST00000530131 FBXO31Q5XUX0 539 aaPredicted RBP21.55■■□□□ 1.04
RDX-209ENST00000530131 POLR1AO95602 1720 aaPredicted RBP21.55■■□□□ 1.04
RDX-209ENST00000530131 KIAA1210Q9ULL0 1709 aa21.55■■□□□ 1.04
RDX-209ENST00000530131 ARID4BQ4LE39 1312 aaPredicted RBP21.54■■□□□ 1.04
RDX-209ENST00000530131 SLC52A1Q9NWF4 448 aa21.54■■□□□ 1.04
RDX-209ENST00000530131 TMEM131LA2VDJ0 1609 aa21.54■■□□□ 1.04
RDX-209ENST00000530131 MYO5BQ9ULV0 1848 aa21.53■■□□□ 1.04
RDX-209ENST00000530131 IDI1Q13907 227 aa21.53■■□□□ 1.04
RDX-209ENST00000530131 CARD11Q9BXL7 1154 aa21.53■■□□□ 1.04
RDX-209ENST00000530131 NBPF1Q3BBV0 1214 aa21.51■■□□□ 1.03
RDX-209ENST00000530131 ZMYM3Q14202 1370 aa21.51■■□□□ 1.03
RDX-209ENST00000530131 NEXMIFQ5QGS0 1516 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms