RNA–Protein interactions for RNA: ENST00000529898.1

CTR9-205, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-205ENST00000529898 ZBED2Q9BTP6 218 aa9.02□□□□□ -0.97
CTR9-205ENST00000529898 BHMG1C9JSJ3 638 aaPredicted RBP9□□□□□ -0.97
CTR9-205ENST00000529898 PPP1R3GB7ZBB8 358 aa8.99□□□□□ -0.97
CTR9-205ENST00000529898 ARHGEF1Q92888 912 aaKnown RBP8.98□□□□□ -0.97
CTR9-205ENST00000529898 C6orf132Q5T0Z8 1188 aa8.97□□□□□ -0.97
CTR9-205ENST00000529898 DDX12PQ92771 950 aa8.97□□□□□ -0.97
CTR9-205ENST00000529898 ONECUT3O60422 494 aaPredicted RBP8.96□□□□□ -0.98
CTR9-205ENST00000529898 COL9A1P20849 921 aa8.96□□□□□ -0.98
CTR9-205ENST00000529898 EN1Q05925 392 aaPredicted RBP8.95□□□□□ -0.98
CTR9-205ENST00000529898 KCNV2Q8TDN2 545 aa8.94□□□□□ -0.98
CTR9-205ENST00000529898 RABGEF1Q9UJ41 708 aa8.93□□□□□ -0.98
CTR9-205ENST00000529898 OSBPP22059 807 aa8.92□□□□□ -0.98
CTR9-205ENST00000529898 NBR1Q14596 966 aa8.92□□□□□ -0.98
CTR9-205ENST00000529898 PRIM1P49642 420 aaKnown RBP8.91□□□□□ -0.98
CTR9-205ENST00000529898 PROX2Q3B8N5 592 aa8.89□□□□□ -0.99
CTR9-205ENST00000529898 P3H3Q8IVL6 736 aa8.89□□□□□ -0.99
CTR9-205ENST00000529898 RBM33Q96EV2 1170 aaKnown RBP8.89□□□□□ -0.99
CTR9-205ENST00000529898 STAC3Q96MF2 364 aa8.89□□□□□ -0.99
CTR9-205ENST00000529898 HCSTQ9UBK5 93 aa8.89□□□□□ -0.99
CTR9-205ENST00000529898 GRXCR2A6NFK2 248 aa8.88□□□□□ -0.99
CTR9-205ENST00000529898 TSR1Q2NL82 804 aaKnown RBP8.88□□□□□ -0.99
CTR9-205ENST00000529898 NBPF3Q9H094 633 aa8.88□□□□□ -0.99
CTR9-205ENST00000529898 TRIM6-TRIM34B2RNG4 842 aa8.87□□□□□ -0.99
CTR9-205ENST00000529898 MAP3K7O43318 606 aa8.87□□□□□ -0.99
CTR9-205ENST00000529898 LAPTM4BQ86VI4 370 aa8.87□□□□□ -0.99
CTR9-205ENST00000529898 MRPL50Q8N5N7 158 aaKnown RBP8.87□□□□□ -0.99
CTR9-205ENST00000529898 CERKQ8TCT0 537 aa8.87□□□□□ -0.99
CTR9-205ENST00000529898 KIAA1468Q9P260 1216 aa8.85□□□□□ -0.99
CTR9-205ENST00000529898 KCTD12Q96CX2 325 aaKnown RBP8.84□□□□□ -0.99
CTR9-205ENST00000529898 MLLT3P42568 568 aaPredicted RBP8.83□□□□□ -1
CTR9-205ENST00000529898 RBM27Q9P2N5 1060 aaKnown RBP8.83□□□□□ -1
CTR9-205ENST00000529898 KDM2AQ9Y2K7 1162 aa8.83□□□□□ -1
CTR9-205ENST00000529898 PRSS12P56730 875 aa8.82□□□□□ -1
CTR9-205ENST00000529898 THSD4Q6ZMP0 1018 aa8.82□□□□□ -1
CTR9-205ENST00000529898 NPDC1Q9NQX5 325 aaPredicted RBP8.82□□□□□ -1
CTR9-205ENST00000529898 TSKSQ9UJT2 592 aa8.82□□□□□ -1
CTR9-205ENST00000529898 HAP1P54257 671 aaPredicted RBP8.81□□□□□ -1
CTR9-205ENST00000529898 TTC13Q8NBP0 860 aa8.81□□□□□ -1
CTR9-205ENST00000529898 CDCA7LQ96GN5 454 aa8.81□□□□□ -1
CTR9-205ENST00000529898 PACS2Q86VP3 889 aa8.8□□□□□ -1
CTR9-205ENST00000529898 WNT2BQ93097 391 aa8.8□□□□□ -1
CTR9-205ENST00000529898 CDHR5Q9HBB8 845 aa8.8□□□□□ -1
CTR9-205ENST00000529898 FAM198AQ9UFP1 575 aa8.8□□□□□ -1
CTR9-205ENST00000529898 GOLGA8CPA6NN73 597 aa8.79□□□□□ -1
CTR9-205ENST00000529898 VSIG10Q8N0Z9 540 aa8.79□□□□□ -1
CTR9-205ENST00000529898 FAM98CQ17RN3 349 aaKnown RBP8.78□□□□□ -1
CTR9-205ENST00000529898 ZFRQ96KR1 1074 aaKnown RBP8.78□□□□□ -1
CTR9-205ENST00000529898 SOWAHBA6NEL2 793 aa8.76□□□□□ -1.01
CTR9-205ENST00000529898 SEMA3EO15041 775 aa8.76□□□□□ -1.01
CTR9-205ENST00000529898 ANKK1Q8NFD2 765 aa8.76□□□□□ -1.01
CTR9-205ENST00000529898 TESPA1A2RU30 521 aaPredicted RBP8.75□□□□□ -1.01
CTR9-205ENST00000529898 SEPT9Q9UHD8 586 aaPredicted RBP8.75□□□□□ -1.01
CTR9-205ENST00000529898 C3orf80F5H4A9 247 aa8.74□□□□□ -1.01
CTR9-205ENST00000529898 PTPN5P54829 565 aa8.73□□□□□ -1.01
CTR9-205ENST00000529898 PTGDRQ13258 359 aa8.73□□□□□ -1.01
CTR9-205ENST00000529898 IFFO2Q5TF58 517 aa8.73□□□□□ -1.01
CTR9-205ENST00000529898 TATDN2Q93075 761 aa8.73□□□□□ -1.01
CTR9-205ENST00000529898 PLA2G2EQ9NZK7 142 aa8.72□□□□□ -1.01
CTR9-205ENST00000529898 NBPF26B4DH59 902 aa8.71□□□□□ -1.02
CTR9-205ENST00000529898 NYAP1Q6ZVC0 841 aa8.71□□□□□ -1.02
CTR9-205ENST00000529898 BCAMP50895 628 aa8.7□□□□□ -1.02
CTR9-205ENST00000529898 PADI6Q6TGC4 694 aa8.7□□□□□ -1.02
CTR9-205ENST00000529898 PNMA3Q9UL41 463 aa8.69□□□□□ -1.02
CTR9-205ENST00000529898 SMAPO00193 183 aa8.68□□□□□ -1.02
CTR9-205ENST00000529898 SMYD5Q6GMV2 418 aa8.68□□□□□ -1.02
CTR9-205ENST00000529898 NUDT18Q6ZVK8 323 aa8.68□□□□□ -1.02
CTR9-205ENST00000529898 LRCH3Q96II8 777 aa8.68□□□□□ -1.02
CTR9-205ENST00000529898 EYA1Q99502 592 aa8.68□□□□□ -1.02
CTR9-205ENST00000529898 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.68□□□□□ -1.02
CTR9-205ENST00000529898 TSR3Q9UJK0 312 aaKnown RBP8.67□□□□□ -1.02
CTR9-205ENST00000529898 FCHSD2O94868 740 aa8.66□□□□□ -1.02
CTR9-205ENST00000529898 WBP1LQ9NX94 342 aa8.66□□□□□ -1.02
CTR9-205ENST00000529898 ITGBL1O95965 494 aaPredicted RBP8.65□□□□□ -1.02
CTR9-205ENST00000529898 SAMD7Q7Z3H4 446 aa8.65□□□□□ -1.02
CTR9-205ENST00000529898 NUTM2FA1L443 756 aa8.64□□□□□ -1.03
CTR9-205ENST00000529898 GPR37O15354 613 aa8.63□□□□□ -1.03
CTR9-205ENST00000529898 RBM26Q5T8P6 1007 aaKnown RBP8.63□□□□□ -1.03
CTR9-205ENST00000529898 HPS5Q9UPZ3 1129 aa8.63□□□□□ -1.03
CTR9-205ENST00000529898 ADGRG1Q9Y653 693 aa8.63□□□□□ -1.03
CTR9-205ENST00000529898 HIC1Q14526 733 aa8.62□□□□□ -1.03
CTR9-205ENST00000529898 HDGFP51858 240 aaKnown RBP8.6□□□□□ -1.03
CTR9-205ENST00000529898 PPP4CP60510 307 aa8.6□□□□□ -1.03
CTR9-205ENST00000529898 RBM46Q8TBY0 533 aaKnown RBP8.59□□□□□ -1.03
CTR9-205ENST00000529898 SWT1Q5T5J6 900 aaKnown RBP8.58□□□□□ -1.04
CTR9-205ENST00000529898 GNPATO15228 680 aa8.57□□□□□ -1.04
CTR9-205ENST00000529898 DNAJB2P25686 324 aa8.57□□□□□ -1.04
CTR9-205ENST00000529898 SLF2Q8IX21 1173 aa8.57□□□□□ -1.04
CTR9-205ENST00000529898 NECTIN2Q92692 538 aa8.57□□□□□ -1.04
CTR9-205ENST00000529898 TMEM134Q9H6X4 195 aa8.57□□□□□ -1.04
CTR9-205ENST00000529898 OATP04181 439 aa8.56□□□□□ -1.04
CTR9-205ENST00000529898 PXYLP1Q8TE99 480 aa8.56□□□□□ -1.04
CTR9-205ENST00000529898 A0A0G2JS52 829 aa8.55□□□□□ -1.04
CTR9-205ENST00000529898 RCCD1A6NED2 376 aa8.55□□□□□ -1.04
CTR9-205ENST00000529898 RGS20O76081 388 aa8.55□□□□□ -1.04
CTR9-205ENST00000529898 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.54□□□□□ -1.04
CTR9-205ENST00000529898 TJAP1Q5JTD0 557 aa8.54□□□□□ -1.04
CTR9-205ENST00000529898 FECHP22830 423 aa8.53□□□□□ -1.04
CTR9-205ENST00000529898 KCNC4Q03721 635 aa8.53□□□□□ -1.04
CTR9-205ENST00000529898 FAM161AQ3B820 660 aa8.53□□□□□ -1.04
CTR9-205ENST00000529898 METTL3Q86U44 580 aaKnown RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms