RNA–Protein interactions for RNA: ENST00000529873.5

CTNND1-221, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-221ENST00000529873 CCDC146Q8IYE0 955 aa10.63□□□□□ -0.71
CTNND1-221ENST00000529873 CENPJQ9HC77 1338 aaPredicted RBP10.63□□□□□ -0.71
CTNND1-221ENST00000529873 FANCD2Q9BXW9 1451 aa10.63□□□□□ -0.71
CTNND1-221ENST00000529873 HSP90B1P14625 803 aaKnown RBP10.62□□□□□ -0.71
CTNND1-221ENST00000529873 TPM4P67936 248 aa10.62□□□□□ -0.71
CTNND1-221ENST00000529873 PDE3BQ13370 1112 aa10.62□□□□□ -0.71
CTNND1-221ENST00000529873 GORABQ5T7V8 394 aa10.62□□□□□ -0.71
CTNND1-221ENST00000529873 L3MBTL2Q969R5 705 aa10.62□□□□□ -0.71
CTNND1-221ENST00000529873 MYBBP1AQ9BQG0 1328 aaKnown RBP10.62□□□□□ -0.71
CTNND1-221ENST00000529873 TAF7LQ5H9L4 462 aa10.62□□□□□ -0.71
CTNND1-221ENST00000529873 APPP05067 770 aa10.62□□□□□ -0.71
CTNND1-221ENST00000529873 CHMP3Q9Y3E7 222 aa10.62□□□□□ -0.71
CTNND1-221ENST00000529873 CSPP1Q1MSJ5 1256 aa10.61□□□□□ -0.71
CTNND1-221ENST00000529873 NUTM2DQ5VT03 806 aaPredicted RBP10.61□□□□□ -0.71
CTNND1-221ENST00000529873 MFAP1P55081 439 aaKnown RBP10.61□□□□□ -0.71
CTNND1-221ENST00000529873 NGDNQ8NEJ9 315 aaKnown RBP10.61□□□□□ -0.71
CTNND1-221ENST00000529873 TRIM6-TRIM34B2RNG4 842 aa10.61□□□□□ -0.71
CTNND1-221ENST00000529873 NLRP13Q86W25 1043 aa10.6□□□□□ -0.71
CTNND1-221ENST00000529873 AMPHP49418 695 aa10.6□□□□□ -0.71
CTNND1-221ENST00000529873 HOMEZQ8IX15 550 aa10.6□□□□□ -0.71
CTNND1-221ENST00000529873 CUX1P39880 1505 aa10.6□□□□□ -0.71
CTNND1-221ENST00000529873 USP35Q9P2H5 1018 aa10.59□□□□□ -0.71
CTNND1-221ENST00000529873 CCDC9Q9Y3X0 531 aaKnown RBP10.59□□□□□ -0.71
CTNND1-221ENST00000529873 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.59□□□□□ -0.712e-8■□□□□ 11.3
CTNND1-221ENST00000529873 HSP90AA2PQ14568 343 aaPredicted RBP10.59□□□□□ -0.71
CTNND1-221ENST00000529873 SLC4A10Q6U841 1118 aa10.58□□□□□ -0.72
CTNND1-221ENST00000529873 JPH4Q96JJ6 628 aa10.57□□□□□ -0.72
CTNND1-221ENST00000529873 PRDM2Q13029 1718 aa10.56□□□□□ -0.72
CTNND1-221ENST00000529873 TRAK1Q9UPV9 953 aa10.56□□□□□ -0.72
CTNND1-221ENST00000529873 EVC2Q86UK5 1308 aa10.56□□□□□ -0.72
CTNND1-221ENST00000529873 GOLGA6L1Q8N7Z2 621 aa10.56□□□□□ -0.72
CTNND1-221ENST00000529873 CCDC34Q96HJ3 373 aa10.55□□□□□ -0.72
CTNND1-221ENST00000529873 SLKQ9H2G2 1235 aaPredicted RBP10.55□□□□□ -0.72
CTNND1-221ENST00000529873 CGNL1Q0VF96 1302 aa10.55□□□□□ -0.72
CTNND1-221ENST00000529873 DHX57Q6P158 1386 aaKnown RBP10.55□□□□□ -0.72
CTNND1-221ENST00000529873 UBE2Q2Q8WVN8 375 aa10.55□□□□□ -0.72
CTNND1-221ENST00000529873 G3V3G9 751 aa10.55□□□□□ -0.72
CTNND1-221ENST00000529873 SETQ01105 290 aaPredicted RBP10.55□□□□□ -0.72
CTNND1-221ENST00000529873 DCAF8Q5TAQ9 597 aa10.55□□□□□ -0.72
CTNND1-221ENST00000529873 PANK3Q9H999 370 aa10.55□□□□□ -0.72
CTNND1-221ENST00000529873 COG3Q96JB2 828 aa10.54□□□□□ -0.72
CTNND1-221ENST00000529873 PTPRGP23470 1445 aa10.54□□□□□ -0.72
CTNND1-221ENST00000529873 GOLGA6L3A6NEY3 463 aa10.54□□□□□ -0.72
CTNND1-221ENST00000529873 NOC3LQ8WTT2 800 aaKnown RBP10.54□□□□□ -0.72
CTNND1-221ENST00000529873 IPO9Q96P70 1041 aaKnown RBP10.54□□□□□ -0.72
CTNND1-221ENST00000529873 ST18O60284 1047 aa10.54□□□□□ -0.72
CTNND1-221ENST00000529873 LTV1Q96GA3 475 aaPredicted RBP10.53□□□□□ -0.72
CTNND1-221ENST00000529873 C1orf141Q5JVX7 400 aa10.53□□□□□ -0.72
CTNND1-221ENST00000529873 GZF1Q9H116 711 aaPredicted RBP10.53□□□□□ -0.72
CTNND1-221ENST00000529873 VGFO15240 615 aaPredicted RBP10.53□□□□□ -0.72
CTNND1-221ENST00000529873 PHF14O94880 888 aa10.53□□□□□ -0.72
CTNND1-221ENST00000529873 KIF16BQ96L93 1317 aa10.52□□□□□ -0.72
CTNND1-221ENST00000529873 USP47Q96K76 1375 aa10.52□□□□□ -0.73
CTNND1-221ENST00000529873 E9PSI1 815 aa10.52□□□□□ -0.73
CTNND1-221ENST00000529873 CLUAP1Q96AJ1 413 aa10.52□□□□□ -0.73
CTNND1-221ENST00000529873 CENPQQ7L2Z9 268 aaPredicted RBP10.52□□□□□ -0.73
CTNND1-221ENST00000529873 GAPVD1Q14C86 1478 aa10.51□□□□□ -0.73
CTNND1-221ENST00000529873 FGD5Q6ZNL6 1462 aa10.51□□□□□ -0.73
CTNND1-221ENST00000529873 ST20-MTHFSA0A0A6YYL1 179 aa10.51□□□□□ -0.73
CTNND1-221ENST00000529873 RRP7AQ9Y3A4 280 aaKnown RBP10.51□□□□□ -0.73
CTNND1-221ENST00000529873 NOL8Q76FK4 1167 aaKnown RBP10.5□□□□□ -0.73
CTNND1-221ENST00000529873 KIF3AQ9Y496 699 aa10.5□□□□□ -0.73
CTNND1-221ENST00000529873 RUSC2Q8N2Y8 1516 aa10.5□□□□□ -0.73
CTNND1-221ENST00000529873 RASSF8Q8NHQ8 419 aa10.5□□□□□ -0.73
CTNND1-221ENST00000529873 FOXD4L1Q9NU39 408 aa10.5□□□□□ -0.73
CTNND1-221ENST00000529873 MYOM3Q5VTT5 1437 aa10.5□□□□□ -0.73
CTNND1-221ENST00000529873 DDX11L8A8MPP1 907 aa10.49□□□□□ -0.73
CTNND1-221ENST00000529873 ZKSCAN2Q63HK3 967 aa10.49□□□□□ -0.73
CTNND1-221ENST00000529873 CHMP4CQ96CF2 233 aa10.49□□□□□ -0.73
CTNND1-221ENST00000529873 NUTM2FA1L443 756 aa10.48□□□□□ -0.73
CTNND1-221ENST00000529873 RRP1P56182 461 aaKnown RBP10.48□□□□□ -0.73
CTNND1-221ENST00000529873 FRAT2O75474 233 aaPredicted RBP10.47□□□□□ -0.73
CTNND1-221ENST00000529873 TOMM22Q9NS69 142 aa10.47□□□□□ -0.73
CTNND1-221ENST00000529873 ROCK1Q13464 1354 aa10.47□□□□□ -0.73
CTNND1-221ENST00000529873 EVA1CP58658 441 aa10.47□□□□□ -0.73
CTNND1-221ENST00000529873 RILPL2Q969X0 211 aa10.47□□□□□ -0.73
CTNND1-221ENST00000529873 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.47□□□□□ -0.73
CTNND1-221ENST00000529873 ZBED9Q6R2W3 1325 aa10.47□□□□□ -0.73
CTNND1-221ENST00000529873 H3BQV1 296 aa10.46□□□□□ -0.73
CTNND1-221ENST00000529873 FAM161AQ3B820 660 aa10.46□□□□□ -0.73
CTNND1-221ENST00000529873 IFFO2Q5TF58 517 aa10.46□□□□□ -0.73
CTNND1-221ENST00000529873 ANKRD45Q5TZF3 282 aa10.46□□□□□ -0.73
CTNND1-221ENST00000529873 ANO8Q9HCE9 1232 aaPredicted RBP10.46□□□□□ -0.73
CTNND1-221ENST00000529873 GTF2E1P29083 439 aaPredicted RBP10.46□□□□□ -0.73
CTNND1-221ENST00000529873 NCBP3Q53F19 620 aaKnown RBP10.46□□□□□ -0.73
CTNND1-221ENST00000529873 TSHZ2Q9NRE2 1034 aa10.46□□□□□ -0.73
CTNND1-221ENST00000529873 TTC5Q8N0Z6 440 aa10.46□□□□□ -0.74
CTNND1-221ENST00000529873 MINK1Q8N4C8 1332 aaPredicted RBP10.45□□□□□ -0.74
CTNND1-221ENST00000529873 FYCO1Q9BQS8 1478 aa10.45□□□□□ -0.74
CTNND1-221ENST00000529873 DIAPH1O60610 1272 aaKnown RBP10.45□□□□□ -0.74
CTNND1-221ENST00000529873 LRRFIP1Q32MZ4 808 aaKnown RBP10.45□□□□□ -0.74
CTNND1-221ENST00000529873 MARCH6O60337 910 aa10.45□□□□□ -0.74
CTNND1-221ENST00000529873 CRBNQ96SW2 442 aa10.45□□□□□ -0.74
CTNND1-221ENST00000529873 FGD6Q6ZV73 1430 aa10.45□□□□□ -0.74
CTNND1-221ENST00000529873 PDIA4P13667 645 aaKnown RBP10.44□□□□□ -0.74
CTNND1-221ENST00000529873 SF3A1Q15459 793 aaKnown RBP10.44□□□□□ -0.74
CTNND1-221ENST00000529873 RAD54L2Q9Y4B4 1467 aa10.44□□□□□ -0.74
CTNND1-221ENST00000529873 HMGB1P09429 215 aaKnown RBP10.44□□□□□ -0.74
CTNND1-221ENST00000529873 VPS53Q5VIR6 699 aa10.44□□□□□ -0.74
CTNND1-221ENST00000529873 FAM184AQ8NB25 1140 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms