RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-231ENST00000529540 ATP10AO60312 1499 aa21.3■■□□□ 1
NR1H3-231ENST00000529540 YEATS2Q9ULM3 1422 aa21.28■■□□□ 1
NR1H3-231ENST00000529540 ZNF316A6NFI3 1004 aaPredicted RBP21.28■■□□□ 1
NR1H3-231ENST00000529540 BCORL1Q5H9F3 1711 aa21.24■□□□□ 0.99
NR1H3-231ENST00000529540 AGLP35573 1532 aa21.22■□□□□ 0.99
NR1H3-231ENST00000529540 GTF3C3Q9Y5Q9 886 aa21.21■□□□□ 0.99
NR1H3-231ENST00000529540 UNC13BO14795 1591 aa21.2■□□□□ 0.98
NR1H3-231ENST00000529540 KIF3BO15066 747 aa21.19■□□□□ 0.98
NR1H3-231ENST00000529540 KDM5DQ9BY66 1539 aa21.19■□□□□ 0.98
NR1H3-231ENST00000529540 DEPDC5O75140 1603 aa21.18■□□□□ 0.98
NR1H3-231ENST00000529540 TRIM52Q96A61 297 aa21.18■□□□□ 0.98
NR1H3-231ENST00000529540 RNF17Q9BXT8 1623 aaKnown RBP21.18■□□□□ 0.98
NR1H3-231ENST00000529540 KANK1Q14678 1352 aa21.18■□□□□ 0.98
NR1H3-231ENST00000529540 PRDM15P57071 1507 aaPredicted RBP21.16■□□□□ 0.98
NR1H3-231ENST00000529540 NUP155O75694 1391 aa21.15■□□□□ 0.98
NR1H3-231ENST00000529540 FAM135AQ9P2D6 1515 aa21.14■□□□□ 0.97
NR1H3-231ENST00000529540 PPP6R1Q9UPN7 881 aa21.14■□□□□ 0.97
NR1H3-231ENST00000529540 IQGAP3Q86VI3 1631 aa21.12■□□□□ 0.97
NR1H3-231ENST00000529540 DHX57Q6P158 1386 aaKnown RBP21.1■□□□□ 0.97
NR1H3-231ENST00000529540 MROH1Q8NDA8 1641 aa21.09■□□□□ 0.97
NR1H3-231ENST00000529540 CLSPNQ9HAW4 1339 aa21.09■□□□□ 0.97
NR1H3-231ENST00000529540 VWDEQ8N2E2 1590 aa21.09■□□□□ 0.97
NR1H3-231ENST00000529540 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.09■□□□□ 0.971e-6■■□□□ 11.6
NR1H3-231ENST00000529540 SLC4A1APQ9BWU0 796 aaKnown RBP21.09■□□□□ 0.97
NR1H3-231ENST00000529540 ZC3H13Q5T200 1668 aaKnown RBP21.08■□□□□ 0.96
NR1H3-231ENST00000529540 GGT6Q6P531 493 aa21.08■□□□□ 0.96
NR1H3-231ENST00000529540 MPHOSPH9Q99550 1183 aa21.08■□□□□ 0.96
NR1H3-231ENST00000529540 PZPP20742 1482 aa21.07■□□□□ 0.96
NR1H3-231ENST00000529540 ARID4BQ4LE39 1312 aaPredicted RBP21.07■□□□□ 0.96
NR1H3-231ENST00000529540 LMTK2Q8IWU2 1503 aa21.07■□□□□ 0.96
NR1H3-231ENST00000529540 MYT1Q01538 1121 aa21.03■□□□□ 0.96
NR1H3-231ENST00000529540 WASHC2CQ9Y4E1 1318 aa21.03■□□□□ 0.96
NR1H3-231ENST00000529540 TET3O43151 1660 aa21.03■□□□□ 0.96
NR1H3-231ENST00000529540 SIGLEC1Q9BZZ2 1709 aa21.02■□□□□ 0.96
NR1H3-231ENST00000529540 ESF1Q9H501 851 aaKnown RBP21.01■□□□□ 0.95
NR1H3-231ENST00000529540 ABCC3O15438 1527 aa21.01■□□□□ 0.95
NR1H3-231ENST00000529540 CNTLNQ9NXG0 1405 aa21■□□□□ 0.95
NR1H3-231ENST00000529540 RPRD2Q5VT52 1461 aaKnown RBP20.99■□□□□ 0.95
NR1H3-231ENST00000529540 PKD2Q13563 968 aa20.99■□□□□ 0.95
NR1H3-231ENST00000529540 EFCAB6Q5THR3 1501 aa20.98■□□□□ 0.95
NR1H3-231ENST00000529540 CEP152O94986 1710 aa20.96■□□□□ 0.95
NR1H3-231ENST00000529540 ARHGAP31Q2M1Z3 1444 aa20.96■□□□□ 0.95
NR1H3-231ENST00000529540 MLECQ14165 292 aa20.96■□□□□ 0.95
NR1H3-231ENST00000529540 CAMSAP1Q5T5Y3 1602 aa20.95■□□□□ 0.94
NR1H3-231ENST00000529540 MIER1Q8N108 512 aa20.92■□□□□ 0.94
NR1H3-231ENST00000529540 E9PCH4 1651 aa20.92■□□□□ 0.94
NR1H3-231ENST00000529540 MROH2AA6NES4 1674 aa20.91■□□□□ 0.94
NR1H3-231ENST00000529540 ANKRD30BQ9BXX2 1392 aa20.9■□□□□ 0.94
NR1H3-231ENST00000529540 CLTCQ00610 1675 aaKnown RBP20.9■□□□□ 0.94
NR1H3-231ENST00000529540 NPATQ14207 1427 aa20.9■□□□□ 0.94
NR1H3-231ENST00000529540 FER1L4A9Z1Z3 1794 aa20.88■□□□□ 0.93
NR1H3-231ENST00000529540 PTPRTO14522 1441 aa20.87■□□□□ 0.93
NR1H3-231ENST00000529540 SPHKAPQ2M3C7 1700 aa20.86■□□□□ 0.93
NR1H3-231ENST00000529540 TRPM2O94759 1503 aa20.86■□□□□ 0.93
NR1H3-231ENST00000529540 ZMYM3Q14202 1370 aa20.85■□□□□ 0.93
NR1H3-231ENST00000529540 FOXD1Q16676 465 aa20.85■□□□□ 0.93
NR1H3-231ENST00000529540 CCDC144AA2RUR9 1427 aa20.85■□□□□ 0.93
NR1H3-231ENST00000529540 ADAMTSL3P82987 1691 aa20.85■□□□□ 0.93
NR1H3-231ENST00000529540 NOS1P29475 1434 aa20.82■□□□□ 0.92
NR1H3-231ENST00000529540 TIMELESSQ9UNS1 1208 aa20.81■□□□□ 0.92
NR1H3-231ENST00000529540 MADDQ8WXG6 1647 aa20.81■□□□□ 0.92
NR1H3-231ENST00000529540 PLA2R1Q13018 1463 aa20.8■□□□□ 0.92
NR1H3-231ENST00000529540 YTHDC1Q96MU7 727 aaKnown RBP20.8■□□□□ 0.92
NR1H3-231ENST00000529540 PREX1Q8TCU6 1659 aa20.8■□□□□ 0.92
NR1H3-231ENST00000529540 ERVK-7P63135 1459 aa20.79■□□□□ 0.92
NR1H3-231ENST00000529540 SPATA31D1Q6ZQQ2 1576 aa20.79■□□□□ 0.92
NR1H3-231ENST00000529540 SLC52A1Q9NWF4 448 aa20.78■□□□□ 0.92
NR1H3-231ENST00000529540 RIMS1Q86UR5 1692 aaKnown RBP20.75■□□□□ 0.91
NR1H3-231ENST00000529540 C3P01024 1663 aa20.75■□□□□ 0.91
NR1H3-231ENST00000529540 SIN3AQ96ST3 1273 aa20.74■□□□□ 0.91
NR1H3-231ENST00000529540 NEURL4Q96JN8 1562 aa20.74■□□□□ 0.91
NR1H3-231ENST00000529540 TONSLQ96HA7 1378 aa20.74■□□□□ 0.91
NR1H3-231ENST00000529540 SYNMO15061 1565 aa20.73■□□□□ 0.91
NR1H3-231ENST00000529540 PIK3C2BO00750 1634 aa20.72■□□□□ 0.91
NR1H3-231ENST00000529540 CLTCL1P53675 1640 aa20.71■□□□□ 0.91
NR1H3-231ENST00000529540 TNRQ92752 1358 aa20.71■□□□□ 0.91
NR1H3-231ENST00000529540 FBXO31Q5XUX0 539 aaPredicted RBP20.7■□□□□ 0.9
NR1H3-231ENST00000529540 NLRP1Q9C000 1473 aa20.69■□□□□ 0.9
NR1H3-231ENST00000529540 CFAP65Q6ZU64 1925 aaKnown RBP20.69■□□□□ 0.9
NR1H3-231ENST00000529540 KIF1BO60333 1816 aa20.68■□□□□ 0.9
NR1H3-231ENST00000529540 PTPRMP28827 1452 aa20.68■□□□□ 0.9
NR1H3-231ENST00000529540 STAC3Q96MF2 364 aa20.66■□□□□ 0.9
NR1H3-231ENST00000529540 UGGT1Q9NYU2 1555 aa20.66■□□□□ 0.9
NR1H3-231ENST00000529540 SPATA31E1Q6ZUB1 1445 aa20.65■□□□□ 0.9
NR1H3-231ENST00000529540 ADGRB3O60242 1522 aa20.65■□□□□ 0.9
NR1H3-231ENST00000529540 KDM5AP29375 1690 aaKnown RBP20.64■□□□□ 0.9
NR1H3-231ENST00000529540 CEBPAP49715 358 aaPredicted RBP20.64■□□□□ 0.9
NR1H3-231ENST00000529540 IDI1Q13907 227 aa20.64■□□□□ 0.9
NR1H3-231ENST00000529540 STAG3Q9UJ98 1225 aa20.62■□□□□ 0.89
NR1H3-231ENST00000529540 RPGRIP1LQ68CZ1 1315 aa20.61■□□□□ 0.89
NR1H3-231ENST00000529540 TMEM131LA2VDJ0 1609 aa20.59■□□□□ 0.89
NR1H3-231ENST00000529540 CHGAP10645 457 aaKnown RBP20.59■□□□□ 0.89
NR1H3-231ENST00000529540 L3MBTL2Q969R5 705 aa20.59■□□□□ 0.89
NR1H3-231ENST00000529540 MYO3AQ8NEV4 1616 aa20.59■□□□□ 0.89
NR1H3-231ENST00000529540 SETD1BQ9UPS6 1966 aaKnown RBP20.58■□□□□ 0.89
NR1H3-231ENST00000529540 KDM4FA0A1W2PPD8 638 aa20.58■□□□□ 0.88
NR1H3-231ENST00000529540 RGL3Q3MIN7 710 aa20.58■□□□□ 0.88
NR1H3-231ENST00000529540 A2ML1A8K2U0 1454 aa20.57■□□□□ 0.88
NR1H3-231ENST00000529540 ZNF326Q5BKZ1 582 aaKnown RBP20.57■□□□□ 0.88
NR1H3-231ENST00000529540 PLPPR3Q6T4P5 718 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms