RNA–Protein interactions for RNA: ENST00000528593.1

CKAP5-209, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 2

Gene CKAP5, Length 366 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-209ENST00000528593 JPH4Q96JJ6 628 aa9.78□□□□□ -0.84
CKAP5-209ENST00000528593 WRNQ14191 1432 aaPredicted RBP eCLIP9.78□□□□□ -0.84
CKAP5-209ENST00000528593 ARIH1Q9Y4X5 557 aaPredicted RBP9.77□□□□□ -0.85
CKAP5-209ENST00000528593 FANCD2Q9BXW9 1451 aa9.77□□□□□ -0.85
CKAP5-209ENST00000528593 TSHZ2Q9NRE2 1034 aa9.76□□□□□ -0.85
CKAP5-209ENST00000528593 PDS5BQ9NTI5 1447 aa9.75□□□□□ -0.85
CKAP5-209ENST00000528593 DPYSL4O14531 572 aa9.75□□□□□ -0.85
CKAP5-209ENST00000528593 ARHGAP33O14559 1287 aa9.75□□□□□ -0.85
CKAP5-209ENST00000528593 PRDM2Q13029 1718 aa9.75□□□□□ -0.85
CKAP5-209ENST00000528593 PLCB2Q00722 1185 aa9.74□□□□□ -0.85
CKAP5-209ENST00000528593 E2F4Q16254 413 aa9.74□□□□□ -0.85
CKAP5-209ENST00000528593 ZNF454Q8N9F8 522 aa9.74□□□□□ -0.85
CKAP5-209ENST00000528593 BCL2L12Q9HB09 334 aa9.74□□□□□ -0.85
CKAP5-209ENST00000528593 AXIN2Q9Y2T1 843 aa9.74□□□□□ -0.85
CKAP5-209ENST00000528593 SYNJ1O43426 1573 aa9.73□□□□□ -0.85
CKAP5-209ENST00000528593 PDIA6Q15084 440 aa9.73□□□□□ -0.85
CKAP5-209ENST00000528593 PTGER2P43116 358 aa9.72□□□□□ -0.85
CKAP5-209ENST00000528593 CEP164Q9UPV0 1460 aa9.72□□□□□ -0.85
CKAP5-209ENST00000528593 CUX1P39880 1505 aa9.71□□□□□ -0.86
CKAP5-209ENST00000528593 WDR70Q9NW82 654 aa9.7□□□□□ -0.86
CKAP5-209ENST00000528593 TK2O00142 265 aa9.69□□□□□ -0.86
CKAP5-209ENST00000528593 PHF14O94880 888 aa9.69□□□□□ -0.86
CKAP5-209ENST00000528593 PSEN2P49810 448 aa9.69□□□□□ -0.86
CKAP5-209ENST00000528593 TOP2BQ02880 1626 aa9.69□□□□□ -0.86
CKAP5-209ENST00000528593 DMRTA1Q5VZB9 504 aa9.69□□□□□ -0.86
CKAP5-209ENST00000528593 ZDHHC16Q969W1 377 aa9.69□□□□□ -0.86
CKAP5-209ENST00000528593 PCDHGA10Q9Y5H3 936 aa9.69□□□□□ -0.86
CKAP5-209ENST00000528593 SPDYE16A6NNV3 312 aaPredicted RBP9.68□□□□□ -0.86
CKAP5-209ENST00000528593 ANKRD13DQ6ZTN6 518 aa9.68□□□□□ -0.86
CKAP5-209ENST00000528593 ADAM33Q9BZ11 813 aa9.68□□□□□ -0.86
CKAP5-209ENST00000528593 ADGRD1Q6QNK2 874 aa9.67□□□□□ -0.86
CKAP5-209ENST00000528593 KCNK17Q96T54 332 aa9.67□□□□□ -0.86
CKAP5-209ENST00000528593 KIF21AQ7Z4S6 1674 aa9.67□□□□□ -0.86
CKAP5-209ENST00000528593 BIVM-ERCC5R4GMW8 1640 aa9.67□□□□□ -0.86
CKAP5-209ENST00000528593 FBXW7Q969H0 707 aa9.66□□□□□ -0.86
CKAP5-209ENST00000528593 SLC4A5Q9BY07 1137 aa9.66□□□□□ -0.86
CKAP5-209ENST00000528593 URB2Q14146 1524 aaKnown RBP9.66□□□□□ -0.86
CKAP5-209ENST00000528593 ERCC6Q03468 1493 aa9.66□□□□□ -0.86
CKAP5-209ENST00000528593 HRO43593 1189 aa9.65□□□□□ -0.86
CKAP5-209ENST00000528593 TYW1BQ6NUM6 668 aa9.65□□□□□ -0.86
CKAP5-209ENST00000528593 EPAS1Q99814 870 aa9.65□□□□□ -0.86
CKAP5-209ENST00000528593 MYT1LQ9UL68 1186 aa9.65□□□□□ -0.86
CKAP5-209ENST00000528593 DNMBPQ6XZF7 1577 aa9.65□□□□□ -0.86
CKAP5-209ENST00000528593 TOPBP1Q92547 1522 aa9.65□□□□□ -0.86
CKAP5-209ENST00000528593 PTPREP23469 700 aa9.64□□□□□ -0.87
CKAP5-209ENST00000528593 FAM9AQ8IZU1 332 aaPredicted RBP9.64□□□□□ -0.87
CKAP5-209ENST00000528593 KCNH8Q96L42 1107 aa9.64□□□□□ -0.87
CKAP5-209ENST00000528593 MRC2Q9UBG0 1479 aa9.64□□□□□ -0.87
CKAP5-209ENST00000528593 SOGA1O94964 1423 aa9.63□□□□□ -0.87
CKAP5-209ENST00000528593 FGD5Q6ZNL6 1462 aa9.62□□□□□ -0.87
CKAP5-209ENST00000528593 RNF166Q96A37 237 aaPredicted RBP9.62□□□□□ -0.87
CKAP5-209ENST00000528593 KCNV2Q8TDN2 545 aa9.61□□□□□ -0.87
CKAP5-209ENST00000528593 ZBED2Q9BTP6 218 aa9.61□□□□□ -0.87
CKAP5-209ENST00000528593 VPS9D1Q9Y2B5 631 aa9.61□□□□□ -0.87
CKAP5-209ENST00000528593 PPP1R3GB7ZBB8 358 aa9.6□□□□□ -0.87
CKAP5-209ENST00000528593 POLA1P09884 1462 aaPredicted RBP9.59□□□□□ -0.87
CKAP5-209ENST00000528593 DDX12PQ92771 950 aa9.59□□□□□ -0.87
CKAP5-209ENST00000528593 ARHGEF1Q92888 912 aaKnown RBP9.59□□□□□ -0.87
CKAP5-209ENST00000528593 RUSC2Q8N2Y8 1516 aa9.59□□□□□ -0.87
CKAP5-209ENST00000528593 RAD54L2Q9Y4B4 1467 aa9.58□□□□□ -0.88
CKAP5-209ENST00000528593 EEA1Q15075 1411 aa9.57□□□□□ -0.88
CKAP5-209ENST00000528593 WDR62O43379 1518 aa9.57□□□□□ -0.88
CKAP5-209ENST00000528593 COL9A1P20849 921 aa9.57□□□□□ -0.88
CKAP5-209ENST00000528593 EN1Q05925 392 aaPredicted RBP9.57□□□□□ -0.88
CKAP5-209ENST00000528593 THOC2Q8NI27 1593 aaKnown RBP9.56□□□□□ -0.88
CKAP5-209ENST00000528593 BHMG1C9JSJ3 638 aaPredicted RBP9.56□□□□□ -0.88
CKAP5-209ENST00000528593 NBR1Q14596 966 aa9.56□□□□□ -0.88
CKAP5-209ENST00000528593 C6orf132Q5T0Z8 1188 aa9.56□□□□□ -0.88
CKAP5-209ENST00000528593 CUX2O14529 1486 aa9.55□□□□□ -0.88
CKAP5-209ENST00000528593 P3H3Q8IVL6 736 aa9.55□□□□□ -0.88
CKAP5-209ENST00000528593 PRIM1P49642 420 aaKnown RBP9.54□□□□□ -0.88
CKAP5-209ENST00000528593 KIF27Q86VH2 1401 aa9.54□□□□□ -0.88
CKAP5-209ENST00000528593 ABCA10Q8WWZ4 1543 aa9.53□□□□□ -0.88
CKAP5-209ENST00000528593 LOC105371045A0A1W2PR82 267 aa9.53□□□□□ -0.88
CKAP5-209ENST00000528593 OSBPP22059 807 aa9.52□□□□□ -0.89
CKAP5-209ENST00000528593 RBM33Q96EV2 1170 aaKnown RBP9.51□□□□□ -0.89
CKAP5-209ENST00000528593 ONECUT3O60422 494 aaPredicted RBP9.5□□□□□ -0.89
CKAP5-209ENST00000528593 HAP1P54257 671 aaPredicted RBP9.5□□□□□ -0.89
CKAP5-209ENST00000528593 TSR1Q2NL82 804 aaKnown RBP9.5□□□□□ -0.89
CKAP5-209ENST00000528593 PROX2Q3B8N5 592 aa9.5□□□□□ -0.89
CKAP5-209ENST00000528593 IFT140Q96RY7 1462 aa9.5□□□□□ -0.89
CKAP5-209ENST00000528593 TDRD9Q8NDG6 1382 aaKnown RBP9.5□□□□□ -0.89
CKAP5-209ENST00000528593 TARBP1Q13395 1621 aaKnown RBP9.49□□□□□ -0.89
CKAP5-209ENST00000528593 GRXCR2A6NFK2 248 aa9.49□□□□□ -0.89
CKAP5-209ENST00000528593 MAP3K7O43318 606 aa9.49□□□□□ -0.89
CKAP5-209ENST00000528593 RABGEF1Q9UJ41 708 aa9.49□□□□□ -0.89
CKAP5-209ENST00000528593 KDM2AQ9Y2K7 1162 aa9.48□□□□□ -0.89
CKAP5-209ENST00000528593 WDR97A6NE52 1622 aa9.48□□□□□ -0.89
CKAP5-209ENST00000528593 NBPF3Q9H094 633 aa9.47□□□□□ -0.89
CKAP5-209ENST00000528593 IGF1RP08069 1367 aa9.47□□□□□ -0.89
CKAP5-209ENST00000528593 TRIM6-TRIM34B2RNG4 842 aa9.46□□□□□ -0.9
CKAP5-209ENST00000528593 MLLT3P42568 568 aaPredicted RBP9.46□□□□□ -0.9
CKAP5-209ENST00000528593 ZNF608Q9ULD9 1512 aaPredicted RBP9.46□□□□□ -0.9
CKAP5-209ENST00000528593 AQRO60306 1485 aaKnown RBP eCLIP9.45□□□□□ -0.97e-6■■□□□ 12.2
CKAP5-209ENST00000528593 GAPVD1Q14C86 1478 aa9.45□□□□□ -0.9
CKAP5-209ENST00000528593 ABCA5Q8WWZ7 1642 aa9.45□□□□□ -0.9
CKAP5-209ENST00000528593 MRPL50Q8N5N7 158 aaKnown RBP9.44□□□□□ -0.9
CKAP5-209ENST00000528593 CERKQ8TCT0 537 aa9.44□□□□□ -0.9
CKAP5-209ENST00000528593 GOLGA3Q08378 1498 aa9.44□□□□□ -0.9
CKAP5-209ENST00000528593 PRXQ9BXM0 1461 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms