RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 FRAT1Q92837 279 aaPredicted RBP19.25■□□□□ 0.67
CAPN1-214ENST00000528165 ADGRL2O95490 1459 aa19.25■□□□□ 0.67
CAPN1-214ENST00000528165 ZNF777Q9ULD5 760 aaPredicted RBP19.24■□□□□ 0.67
CAPN1-214ENST00000528165 NUP153P49790 1475 aaKnown RBP19.24■□□□□ 0.67
CAPN1-214ENST00000528165 ANKRD50Q9ULJ7 1429 aa19.23■□□□□ 0.67
CAPN1-214ENST00000528165 DCAF11Q8TEB1 546 aa19.23■□□□□ 0.67
CAPN1-214ENST00000528165 NUP155O75694 1391 aa19.22■□□□□ 0.67
CAPN1-214ENST00000528165 TARBP1Q13395 1621 aaKnown RBP19.21■□□□□ 0.67
CAPN1-214ENST00000528165 PBRM1Q86U86 1689 aa19.21■□□□□ 0.67
CAPN1-214ENST00000528165 KIAA0586Q9BVV6 1533 aa19.21■□□□□ 0.67
CAPN1-214ENST00000528165 PDS5BQ9NTI5 1447 aa19.2■□□□□ 0.66
CAPN1-214ENST00000528165 INSRP06213 1382 aa19.2■□□□□ 0.66
CAPN1-214ENST00000528165 CENPQQ7L2Z9 268 aaPredicted RBP19.2■□□□□ 0.66
CAPN1-214ENST00000528165 ITSN2Q9NZM3 1697 aa19.19■□□□□ 0.66
CAPN1-214ENST00000528165 BLMP54132 1417 aaPredicted RBP19.19■□□□□ 0.66
CAPN1-214ENST00000528165 ADAMTS12P58397 1594 aa19.19■□□□□ 0.66
CAPN1-214ENST00000528165 KDM2BQ8NHM5 1336 aa19.19■□□□□ 0.66
CAPN1-214ENST00000528165 FAM161AQ3B820 660 aa19.19■□□□□ 0.66
CAPN1-214ENST00000528165 TROQ12816 1431 aaPredicted RBP19.19■□□□□ 0.66
CAPN1-214ENST00000528165 PRG4Q92954 1404 aaPredicted RBP19.18■□□□□ 0.66
CAPN1-214ENST00000528165 RAPGEF6Q8TEU7 1601 aa19.18■□□□□ 0.66
CAPN1-214ENST00000528165 CROCC2H7BZ55 1655 aa19.18■□□□□ 0.66
CAPN1-214ENST00000528165 GPATCH8Q9UKJ3 1502 aaKnown RBP19.17■□□□□ 0.66
CAPN1-214ENST00000528165 PER1O15534 1290 aaPredicted RBP19.17■□□□□ 0.66
CAPN1-214ENST00000528165 C20orf194Q5TEA3 1177 aa19.17■□□□□ 0.66
CAPN1-214ENST00000528165 PLEKHH2Q8IVE3 1493 aa19.17■□□□□ 0.66
CAPN1-214ENST00000528165 ZMYM4Q5VZL5 1548 aa19.17■□□□□ 0.66
CAPN1-214ENST00000528165 CC2D1BQ5T0F9 858 aaKnown RBP19.16■□□□□ 0.66
CAPN1-214ENST00000528165 KIAA0556O60303 1618 aa19.16■□□□□ 0.66
CAPN1-214ENST00000528165 EIF5BO60841 1220 aaKnown RBP19.15■□□□□ 0.66
CAPN1-214ENST00000528165 C8orf34Q49A92 452 aa19.14■□□□□ 0.65
CAPN1-214ENST00000528165 UBE2Q2Q8WVN8 375 aa19.14■□□□□ 0.65
CAPN1-214ENST00000528165 DISP1Q96F81 1524 aa19.13■□□□□ 0.65
CAPN1-214ENST00000528165 FRAT2O75474 233 aaPredicted RBP19.12■□□□□ 0.65
CAPN1-214ENST00000528165 CEP170Q5SW79 1584 aa19.12■□□□□ 0.65
CAPN1-214ENST00000528165 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.09■□□□□ 0.65
CAPN1-214ENST00000528165 KDM5DQ9BY66 1539 aa19.09■□□□□ 0.65
CAPN1-214ENST00000528165 C9orf84Q5VXU9 1444 aa19.08■□□□□ 0.64
CAPN1-214ENST00000528165 ZNF608Q9ULD9 1512 aaPredicted RBP19.07■□□□□ 0.64
CAPN1-214ENST00000528165 PANK3Q9H999 370 aa19.07■□□□□ 0.64
CAPN1-214ENST00000528165 RGS3P49796 1198 aa19.07■□□□□ 0.64
CAPN1-214ENST00000528165 FAM43AQ8N2R8 423 aa19.07■□□□□ 0.64
CAPN1-214ENST00000528165 PRAG1Q86YV5 1406 aa19.07■□□□□ 0.64
CAPN1-214ENST00000528165 COL17A1Q9UMD9 1497 aaPredicted RBP19.07■□□□□ 0.64
CAPN1-214ENST00000528165 TRPM1Q7Z4N2 1603 aa19.06■□□□□ 0.64
CAPN1-214ENST00000528165 ADAMTS8Q9UP79 889 aa19.06■□□□□ 0.64
CAPN1-214ENST00000528165 SHANK2Q9UPX8 1470 aa19.05■□□□□ 0.64
CAPN1-214ENST00000528165 NBPF1Q3BBV0 1214 aa19.05■□□□□ 0.64
CAPN1-214ENST00000528165 RSPH6AQ9H0K4 717 aa19.05■□□□□ 0.64
CAPN1-214ENST00000528165 ADCY10Q96PN6 1610 aa19.05■□□□□ 0.64
CAPN1-214ENST00000528165 TSPY4P0CV99 314 aa19.05■□□□□ 0.64
CAPN1-214ENST00000528165 TSPY10P0CW01 314 aa19.05■□□□□ 0.64
CAPN1-214ENST00000528165 DUSP27Q5VZP5 1158 aa19.05■□□□□ 0.64
CAPN1-214ENST00000528165 DISP3Q9P2K9 1392 aa19.04■□□□□ 0.64
CAPN1-214ENST00000528165 PTPRGP23470 1445 aa19.03■□□□□ 0.64
CAPN1-214ENST00000528165 WDR43Q15061 677 aaKnown RBP eCLIP19.02■□□□□ 0.64
CAPN1-214ENST00000528165 GOLGA2Q08379 1002 aa19.01■□□□□ 0.63
CAPN1-214ENST00000528165 TESK2Q96S53 571 aa19.01■□□□□ 0.63
CAPN1-214ENST00000528165 GPRASP1Q5JY77 1395 aa19.01■□□□□ 0.63
CAPN1-214ENST00000528165 RGL3Q3MIN7 710 aa19.01■□□□□ 0.63
CAPN1-214ENST00000528165 PLEKHH1Q9ULM0 1364 aa19.01■□□□□ 0.63
CAPN1-214ENST00000528165 CCDC144AA2RUR9 1427 aa19.01■□□□□ 0.63
CAPN1-214ENST00000528165 TMF1P82094 1093 aa19■□□□□ 0.63
CAPN1-214ENST00000528165 ERBINQ96RT1 1412 aa19■□□□□ 0.63
CAPN1-214ENST00000528165 PLB1Q6P1J6 1458 aa18.99■□□□□ 0.63
CAPN1-214ENST00000528165 CDC42BPAQ5VT25 1732 aa18.99■□□□□ 0.63
CAPN1-214ENST00000528165 EIF4G3O43432 1585 aaKnown RBP18.98■□□□□ 0.63
CAPN1-214ENST00000528165 PRDM15P57071 1507 aaPredicted RBP18.97■□□□□ 0.63
CAPN1-214ENST00000528165 ZNF521Q96K83 1311 aa18.96■□□□□ 0.63
CAPN1-214ENST00000528165 FAM135AQ9P2D6 1515 aa18.96■□□□□ 0.63
CAPN1-214ENST00000528165 LAMC1P11047 1609 aa18.95■□□□□ 0.62
CAPN1-214ENST00000528165 PLEKHD1A6NEE1 506 aa18.94■□□□□ 0.62
CAPN1-214ENST00000528165 EIF3AQ14152 1382 aaKnown RBP18.94■□□□□ 0.62
CAPN1-214ENST00000528165 PPP2R1AP30153 589 aa18.94■□□□□ 0.62
CAPN1-214ENST00000528165 SLFN5Q08AF3 891 aa18.93■□□□□ 0.62
CAPN1-214ENST00000528165 BECN1Q14457 450 aa18.93■□□□□ 0.62
CAPN1-214ENST00000528165 POGKQ9P215 609 aa18.93■□□□□ 0.62
CAPN1-214ENST00000528165 KNSTRNQ9Y448 316 aa18.93■□□□□ 0.62
CAPN1-214ENST00000528165 A2MP01023 1474 aa18.93■□□□□ 0.62
CAPN1-214ENST00000528165 HNRNPMP52272 730 aaKnown RBP eCLIP18.92■□□□□ 0.62
CAPN1-214ENST00000528165 GRIN2AQ12879 1464 aa18.91■□□□□ 0.62
CAPN1-214ENST00000528165 USP19O94966 1318 aa18.9■□□□□ 0.62
CAPN1-214ENST00000528165 L1TD1Q5T7N2 865 aaKnown RBP18.9■□□□□ 0.62
CAPN1-214ENST00000528165 ABCC10Q5T3U5 1492 aa18.89■□□□□ 0.61
CAPN1-214ENST00000528165 EIF2AK4Q9P2K8 1649 aaKnown RBP18.89■□□□□ 0.61
CAPN1-214ENST00000528165 SLKQ9H2G2 1235 aaPredicted RBP18.88■□□□□ 0.61
CAPN1-214ENST00000528165 CLASP1Q7Z460 1538 aa18.88■□□□□ 0.61
CAPN1-214ENST00000528165 NKTRP30414 1462 aaKnown RBP18.87■□□□□ 0.61
CAPN1-214ENST00000528165 MAPK8IP3Q9UPT6 1336 aa18.87■□□□□ 0.61
CAPN1-214ENST00000528165 IGHDP01880 384 aa18.87■□□□□ 0.61
CAPN1-214ENST00000528165 TRMT2AQ8IZ69 625 aaKnown RBP18.87■□□□□ 0.61
CAPN1-214ENST00000528165 VIRMAQ69YN4 1812 aaKnown RBP18.87■□□□□ 0.61
CAPN1-214ENST00000528165 MAGI1Q96QZ7 1491 aaPredicted RBP18.87■□□□□ 0.61
CAPN1-214ENST00000528165 BCAR3O75815 825 aa18.87■□□□□ 0.61
CAPN1-214ENST00000528165 ARHGEF5Q12774 1597 aa18.86■□□□□ 0.61
CAPN1-214ENST00000528165 MAGI2Q86UL8 1455 aa18.86■□□□□ 0.61
CAPN1-214ENST00000528165 PLA2R1Q13018 1463 aa18.85■□□□□ 0.61
CAPN1-214ENST00000528165 CCDC146Q8IYE0 955 aa18.85■□□□□ 0.61
CAPN1-214ENST00000528165 NUP160Q12769 1436 aa18.85■□□□□ 0.61
CAPN1-214ENST00000528165 CGNL1Q0VF96 1302 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms